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The map label for this gene is fecI [C]

Identifier: 159897484

GI number: 159897484

Start: 1094708

End: 1095559

Strand: Reverse

Name: fecI [C]

Synonym: Haur_0955

Alternate gene names: 159897484

Gene position: 1095559-1094708 (Counterclockwise)

Preceding gene: 159897485

Following gene: 159897482

Centisome position: 17.26

GC content: 51.41

Gene sequence:

>852_bases
ATGAACCATGTTGAGCTATTCGAAAGCTATCGCGGCTACGTGTTTGGCATTGCCTATCGCATGCTTGGCAGCGTGATGGA
TGCCGAAGATTGTTTGCAAGAGACCTTTTTGCGCTGGCAAAGCCATGCCGAGCAAGTTGAAAACCCACGGGCTTGGCTGG
CAACCGTGGCAACGCGCTGGTGCCTTGATCAGCTTAACACGGCACGCCATCAACGTGAGCAATACATCGGCGAATGGTTG
CCAGAACCATTAATTATCGCCGCGCCTAGCAGTAACGTAGAACAACTCGAATCGTTATCAACCGCATTTTTGGTGCTGCT
TGAACGGCTTTCGCCAGCTGAACGCGCAGTTTTCTTGCTACACAAAGTTTTTGGCTACGAATATAGCGAAATTGCCGAGA
TTGTGGGCAAAACTCCAGCGGCCTGTCGCCAACTTGGCCATCGGGCCGCCGACCATGTGGCCCAAGCTCGTCCACGCTTC
AAGGTTGAGCCAAGCGTGCAGCAACGGCTGAGCGAACAATTTTTACAAAGTTGTGCAACTGGCGATTTAAATGGCTTGAT
GAGTTTGCTTACCGAGGATGTTGTATTGCGCAGCGATGGCGGCGGCGTAGTCCAAGCAGCGCGGAACCCAATTTATGGGC
CGACGGCAGTTGGGCGTTTCTTGCTCGGCGTATTGCCCAAATTGCCTGCCAATAGCATATTTGAGCCACGCCTGATCAAT
GGTCAAGCTGGGTTTGTAGCACTGGTCGATGGGCAGGCCAGCGGCACGTTAATCTTAGATATGCTTGATCAACAGATTGC
TGGGATTTATATTATGCTCAACCCGCAAAAATTACAGCATCTTAAGCCTTGA

Upstream 100 bases:

>100_bases
GTCAATTGGCCGATGCCAGCTTTGCCAGCGGCTACACCGCAGCCAAACAGCTGCTGCAACCAGCCACTCAAAGCCAGATG
CGCAGCGTAGGAGCTTTGGC

Downstream 100 bases:

>100_bases
ACTACTTGTCATGGATCGTTGAGTTGGCAACCCATGACATGCCTGCATCCCCTGCCCCTGCCCTGCTCCCGCACGCGAGG
TGAGGGAAATCCCTCGATCA

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor SigJ; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; ECF Subfamily RNA Polymerase Sigma Factor; Sigma-; RNA Polymerase Sigma Factor; ECF-Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase Sigma-70 Factor; ECF Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family Protein; RNA Polymerase ECF-Type Sigma Factor; Sigma Factor Sigma; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase; Sigma-70 Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; ECF Sigma Factor; Sigma-70 Family RNA Polymerase; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; RNA Polymerase Sigma Subunit; AlteRNAtive RNA Polymerase Sigma Factor; ECF-Family Protein RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70-Like Factor; Sigma-70 Family RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MNHVELFESYRGYVFGIAYRMLGSVMDAEDCLQETFLRWQSHAEQVENPRAWLATVATRWCLDQLNTARHQREQYIGEWL
PEPLIIAAPSSNVEQLESLSTAFLVLLERLSPAERAVFLLHKVFGYEYSEIAEIVGKTPAACRQLGHRAADHVAQARPRF
KVEPSVQQRLSEQFLQSCATGDLNGLMSLLTEDVVLRSDGGGVVQAARNPIYGPTAVGRFLLGVLPKLPANSIFEPRLIN
GQAGFVALVDGQASGTLILDMLDQQIAGIYIMLNPQKLQHLKP

Sequences:

>Translated_283_residues
MNHVELFESYRGYVFGIAYRMLGSVMDAEDCLQETFLRWQSHAEQVENPRAWLATVATRWCLDQLNTARHQREQYIGEWL
PEPLIIAAPSSNVEQLESLSTAFLVLLERLSPAERAVFLLHKVFGYEYSEIAEIVGKTPAACRQLGHRAADHVAQARPRF
KVEPSVQQRLSEQFLQSCATGDLNGLMSLLTEDVVLRSDGGGVVQAARNPIYGPTAVGRFLLGVLPKLPANSIFEPRLIN
GQAGFVALVDGQASGTLILDMLDQQIAGIYIMLNPQKLQHLKP
>Mature_283_residues
MNHVELFESYRGYVFGIAYRMLGSVMDAEDCLQETFLRWQSHAEQVENPRAWLATVATRWCLDQLNTARHQREQYIGEWL
PEPLIIAAPSSNVEQLESLSTAFLVLLERLSPAERAVFLLHKVFGYEYSEIAEIVGKTPAACRQLGHRAADHVAQARPRF
KVEPSVQQRLSEQFLQSCATGDLNGLMSLLTEDVVLRSDGGGVVQAARNPIYGPTAVGRFLLGVLPKLPANSIFEPRLIN
GQAGFVALVDGQASGTLILDMLDQQIAGIYIMLNPQKLQHLKP

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31483; Mature: 31483

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHVELFESYRGYVFGIAYRMLGSVMDAEDCLQETFLRWQSHAEQVENPRAWLATVATRW
CCHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
CLDQLNTARHQREQYIGEWLPEPLIIAAPSSNVEQLESLSTAFLVLLERLSPAERAVFLL
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
HKVFGYEYSEIAEIVGKTPAACRQLGHRAADHVAQARPRFKVEPSVQQRLSEQFLQSCAT
HHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
GDLNGLMSLLTEDVVLRSDGGGVVQAARNPIYGPTAVGRFLLGVLPKLPANSIFEPRLIN
CCHHHHHHHHHHHHHEECCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEC
GQAGFVALVDGQASGTLILDMLDQQIAGIYIMLNPQKLQHLKP
CCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEECHHHHHCCCC
>Mature Secondary Structure
MNHVELFESYRGYVFGIAYRMLGSVMDAEDCLQETFLRWQSHAEQVENPRAWLATVATRW
CCHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
CLDQLNTARHQREQYIGEWLPEPLIIAAPSSNVEQLESLSTAFLVLLERLSPAERAVFLL
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
HKVFGYEYSEIAEIVGKTPAACRQLGHRAADHVAQARPRFKVEPSVQQRLSEQFLQSCAT
HHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
GDLNGLMSLLTEDVVLRSDGGGVVQAARNPIYGPTAVGRFLLGVLPKLPANSIFEPRLIN
CCHHHHHHHHHHHHHEECCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEC
GQAGFVALVDGQASGTLILDMLDQQIAGIYIMLNPQKLQHLKP
CCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEECHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA