| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897467
Identifier: 159897467
GI number: 159897467
Start: 1073141
End: 1074901
Strand: Reverse
Name: 159897467
Synonym: Haur_0938
Alternate gene names: NA
Gene position: 1074901-1073141 (Counterclockwise)
Preceding gene: 159897468
Following gene: 159897465
Centisome position: 16.94
GC content: 50.77
Gene sequence:
>1761_bases ATGGGTCGGCAGCACTTTCGCTATCAACGCCTCGCACTACTCAGCCTTGTGGCTTTGCTGGGAGTGTTAGTCACACCAAC CAAAGCCGTCGAAATCCCGCCAACAGGCGCATCGGTGTACCTCCAAACCAATGGGCCTACCAATACCTTGAATAACGGTG ATTGGTACACCAATAGTCTGGCAGGTGCAGGTAATGGTTATCATTACTTTACGGTTGATATTCCATGTGCTTGGCCGAGC ACTGAGCCAGTCCATATCGATATCTTTAGCCCTGAAATGAATAGTAATGCCCCCCTCAGCGACGAGATTCGTGGTGGGGT GTACGATAATACGCAATTTGAGTTCTATGCTGCTGGCACGCCGATTGTTGTTCCAGCAACGCCTGGCCCAGGTGCGGCTG GTAGTTTGATTCAACAAACCTTTGTGCCTGCTGGCACGCCTGAGGCATGGTTGCGCTTCTACACAATTGCCGCACCTGTC ACTTGTGGTACGTATGTTTTGCGTTCAGCCACTTCCGGCAACGACGAAAATGGTTGGCGCTTGCGGGTTGGCCGCGATAA CGACGCTGATCCCAATAACGCGCCACCAGCCAACACCGATAATTTCGATGGTGTAGCTGGTACTGGCGATGAAATTACCC TTGGGATGCGTCAGGCTTCGTTCCAACACGACGCTGGTGCAGCAGATGTTGTCGCCACATGTTTAACCTTGTATGAATAT GTTACTCCTGGTCAGCCCAGCGTTAGCTTTAATAATTTTGATATCGATAATGTCCGTCGGGTGCGTTATTATGCGCCTGG TGATGCGAGCTACACGCCTATGGGCAATAGCGGTGGCATCGTGGGCAGCCTTAGCAACGACCAAATTTGGAATGGCACTG GCGCAACCTTAGCCACCCGCGTCGGCGATACGATCAATAACCCAGTTTCAGGCTGGTGGCGGATCGTAACCTGTACCAGC AATCACAATCAGTTTATTCAAGAAGGCCAAACTGGCACACCAGCCTACTACGAACAGCCACCAACGCCAGTCATGGCCTT GAGCAAAACCGATGGCGTTACCTTGGTCTTACCAGGCGATACGCTGAATTACACCATCGCCTTTACCAATACTTCCAACA GCACGGCCACGCCAGGTAGTGCAACCAACGTTACCTTAACCGACAATTTACCACCCGACACGACCTTTGTCAGTTGTGCG ATTAATCTGCCATTCACTGGTACATGTAATCATGCTGCTGGTGTGGTGACCTTCAATATTACCCAAATAGTTCGCCCAGG CGAAGTTGGCACACTCAACGTTCAGGTAACCGTCAACGATCCGATCACCACGGTTCCGGTGGTCAACAATGTTACCTTGA CCTTCAACGATACCTTGAACAATGTGTTCCAACCATTGAACGCCAGCGATAGCGATTTGGTCAATCCAACTGCGGTAACT GTGGTTGGCTTCACGGCCTTGGTACGGGTCGATGATATTCAAGTGCGCTGGAGCACTAGCCAAGAATTGGAAACCCAAGG CTTCCATATCTATCGGAGCACCAGTGATGACCCAGCGACCGCCGTCCAAGTGACTGAGAACTTGATTCCAGCCTTGGGTG CGCAAACCAACTATCAATGGCTTGACACCAACGCTGAGCCAAATGTGCATTATTACTATTGGTTGGTTGAAGTCGATGCC AACAATAATTTGAGCATGATCGGCCCAACCGATGCACAAATCGAGCGCTACAGCATTTTCACTCCCTTCGTTATACGCTA A
Upstream 100 bases:
>100_bases GACTTATTACGGCCTTTACTCAACCATACCTATTATTTTTCAAATGTCGTTAATGTGGTCATAGCACATTTCGTTCTTTT TCACCCGCCAAGGAGTTTTT
Downstream 100 bases:
>100_bases ACTCGCTCCCAGCTAAAATAAGCAAGGCCGCGTCGAGTGACGCGGCCTTTGCATTTTAGATCACATTGATCAAGATTAAT TTAACTATTCCCCATTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MGRQHFRYQRLALLSLVALLGVLVTPTKAVEIPPTGASVYLQTNGPTNTLNNGDWYTNSLAGAGNGYHYFTVDIPCAWPS TEPVHIDIFSPEMNSNAPLSDEIRGGVYDNTQFEFYAAGTPIVVPATPGPGAAGSLIQQTFVPAGTPEAWLRFYTIAAPV TCGTYVLRSATSGNDENGWRLRVGRDNDADPNNAPPANTDNFDGVAGTGDEITLGMRQASFQHDAGAADVVATCLTLYEY VTPGQPSVSFNNFDIDNVRRVRYYAPGDASYTPMGNSGGIVGSLSNDQIWNGTGATLATRVGDTINNPVSGWWRIVTCTS NHNQFIQEGQTGTPAYYEQPPTPVMALSKTDGVTLVLPGDTLNYTIAFTNTSNSTATPGSATNVTLTDNLPPDTTFVSCA INLPFTGTCNHAAGVVTFNITQIVRPGEVGTLNVQVTVNDPITTVPVVNNVTLTFNDTLNNVFQPLNASDSDLVNPTAVT VVGFTALVRVDDIQVRWSTSQELETQGFHIYRSTSDDPATAVQVTENLIPALGAQTNYQWLDTNAEPNVHYYYWLVEVDA NNNLSMIGPTDAQIERYSIFTPFVIR
Sequences:
>Translated_586_residues MGRQHFRYQRLALLSLVALLGVLVTPTKAVEIPPTGASVYLQTNGPTNTLNNGDWYTNSLAGAGNGYHYFTVDIPCAWPS TEPVHIDIFSPEMNSNAPLSDEIRGGVYDNTQFEFYAAGTPIVVPATPGPGAAGSLIQQTFVPAGTPEAWLRFYTIAAPV TCGTYVLRSATSGNDENGWRLRVGRDNDADPNNAPPANTDNFDGVAGTGDEITLGMRQASFQHDAGAADVVATCLTLYEY VTPGQPSVSFNNFDIDNVRRVRYYAPGDASYTPMGNSGGIVGSLSNDQIWNGTGATLATRVGDTINNPVSGWWRIVTCTS NHNQFIQEGQTGTPAYYEQPPTPVMALSKTDGVTLVLPGDTLNYTIAFTNTSNSTATPGSATNVTLTDNLPPDTTFVSCA INLPFTGTCNHAAGVVTFNITQIVRPGEVGTLNVQVTVNDPITTVPVVNNVTLTFNDTLNNVFQPLNASDSDLVNPTAVT VVGFTALVRVDDIQVRWSTSQELETQGFHIYRSTSDDPATAVQVTENLIPALGAQTNYQWLDTNAEPNVHYYYWLVEVDA NNNLSMIGPTDAQIERYSIFTPFVIR >Mature_585_residues GRQHFRYQRLALLSLVALLGVLVTPTKAVEIPPTGASVYLQTNGPTNTLNNGDWYTNSLAGAGNGYHYFTVDIPCAWPST EPVHIDIFSPEMNSNAPLSDEIRGGVYDNTQFEFYAAGTPIVVPATPGPGAAGSLIQQTFVPAGTPEAWLRFYTIAAPVT CGTYVLRSATSGNDENGWRLRVGRDNDADPNNAPPANTDNFDGVAGTGDEITLGMRQASFQHDAGAADVVATCLTLYEYV TPGQPSVSFNNFDIDNVRRVRYYAPGDASYTPMGNSGGIVGSLSNDQIWNGTGATLATRVGDTINNPVSGWWRIVTCTSN HNQFIQEGQTGTPAYYEQPPTPVMALSKTDGVTLVLPGDTLNYTIAFTNTSNSTATPGSATNVTLTDNLPPDTTFVSCAI NLPFTGTCNHAAGVVTFNITQIVRPGEVGTLNVQVTVNDPITTVPVVNNVTLTFNDTLNNVFQPLNASDSDLVNPTAVTV VGFTALVRVDDIQVRWSTSQELETQGFHIYRSTSDDPATAVQVTENLIPALGAQTNYQWLDTNAEPNVHYYYWLVEVDAN NNLSMIGPTDAQIERYSIFTPFVIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63053; Mature: 62922
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRQHFRYQRLALLSLVALLGVLVTPTKAVEIPPTGASVYLQTNGPTNTLNNGDWYTNSL CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCCCEEECCC AGAGNGYHYFTVDIPCAWPSTEPVHIDIFSPEMNSNAPLSDEIRGGVYDNTQFEFYAAGT CCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCEEEEEECCC PIVVPATPGPGAAGSLIQQTFVPAGTPEAWLRFYTIAAPVTCGTYVLRSATSGNDENGWR CEEEECCCCCCCHHHHHHHHCCCCCCHHHHEEEEEEECCCHHHHHHEECCCCCCCCCCEE LRVGRDNDADPNNAPPANTDNFDGVAGTGDEITLGMRQASFQHDAGAADVVATCLTLYEY EEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH VTPGQPSVSFNNFDIDNVRRVRYYAPGDASYTPMGNSGGIVGSLSNDQIWNGTGATLATR CCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEECCCCCEEEEC VGDTINNPVSGWWRIVTCTSNHNQFIQEGQTGTPAYYEQPPTPVMALSKTDGVTLVLPGD CCCCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCC TLNYTIAFTNTSNSTATPGSATNVTLTDNLPPDTTFVSCAINLPFTGTCNHAAGVVTFNI CEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEE TQIVRPGEVGTLNVQVTVNDPITTVPVVNNVTLTFNDTLNNVFQPLNASDSDLVNPTAVT EHEECCCCCEEEEEEEEECCCCEEEEEEEEEEEEECCHHHHHHCCCCCCCCCCCCCEEEE VVGFTALVRVDDIQVRWSTSQELETQGFHIYRSTSDDPATAVQVTENLIPALGAQTNYQW EEEEEEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCEEHHHHHHHHHCCCCCCEEE LDTNAEPNVHYYYWLVEVDANNNLSMIGPTDAQIERYSIFTPFVIR EECCCCCCEEEEEEEEEECCCCCEEEECCCCCCEEEEEECCCEEEC >Mature Secondary Structure GRQHFRYQRLALLSLVALLGVLVTPTKAVEIPPTGASVYLQTNGPTNTLNNGDWYTNSL CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCCCEEECCC AGAGNGYHYFTVDIPCAWPSTEPVHIDIFSPEMNSNAPLSDEIRGGVYDNTQFEFYAAGT CCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCEEEEEECCC PIVVPATPGPGAAGSLIQQTFVPAGTPEAWLRFYTIAAPVTCGTYVLRSATSGNDENGWR CEEEECCCCCCCHHHHHHHHCCCCCCHHHHEEEEEEECCCHHHHHHEECCCCCCCCCCEE LRVGRDNDADPNNAPPANTDNFDGVAGTGDEITLGMRQASFQHDAGAADVVATCLTLYEY EEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH VTPGQPSVSFNNFDIDNVRRVRYYAPGDASYTPMGNSGGIVGSLSNDQIWNGTGATLATR CCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEECCCCCEEEEC VGDTINNPVSGWWRIVTCTSNHNQFIQEGQTGTPAYYEQPPTPVMALSKTDGVTLVLPGD CCCCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCC TLNYTIAFTNTSNSTATPGSATNVTLTDNLPPDTTFVSCAINLPFTGTCNHAAGVVTFNI CEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEE TQIVRPGEVGTLNVQVTVNDPITTVPVVNNVTLTFNDTLNNVFQPLNASDSDLVNPTAVT EHEECCCCCEEEEEEEEECCCCEEEEEEEEEEEEECCHHHHHHCCCCCCCCCCCCCEEEE VVGFTALVRVDDIQVRWSTSQELETQGFHIYRSTSDDPATAVQVTENLIPALGAQTNYQW EEEEEEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCEEHHHHHHHHHCCCCCCEEE LDTNAEPNVHYYYWLVEVDANNNLSMIGPTDAQIERYSIFTPFVIR EECCCCCCEEEEEEEEEECCCCCEEEECCCCCCEEEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA