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The map label for this gene is (hspc4-1 [H]

Identifier: 159897465

GI number: 159897465

Start: 1070859

End: 1071326

Strand: Reverse

Name: (hspc4-1 [H]

Synonym: Haur_0936

Alternate gene names: 159897465

Gene position: 1071326-1070859 (Counterclockwise)

Preceding gene: 159897467

Following gene: 159897463

Centisome position: 16.88

GC content: 47.65

Gene sequence:

>468_bases
ATGGCAACTATCAATCGTTGGTCACCAGTTGAAGAAGCTCTTAGCTTGCGCGATGCAATGAGCCGTTTGTTCGAAGAAAG
CTTTGTTGCGCCATCGGCTGCAATGCGCAGCGGTTTGAGTGTTGATATGAACGTTTTGGAAAATGCCAACAGCTATATCG
TTGAAGCTGCCGTGCCTGGTCTCAAAGCTGAAGATCTTGATATTACATTACAAGAAAATGTATTAACGATCAGCGGTGAA
GTTCGCAGCGAAAAATTAAGCGAAGGCACCACCGCCCATCGCACCGAACGTCGCTATGGCCGTTTCAGCCGTTCGATCAA
CTTGCCAATGTTGGTCAAGGGCGACCAAATTAGCGCCACCTTGGAACATGGCATTCTACGACTCGACGTTCCCAAGGCCG
AAGAAGTCAAGCCACGCAAAATTAGCGTGCATGTTGGTCCAGCCAAAGAACTCGAAGTTAATAAATAA

Upstream 100 bases:

>100_bases
TCTAACACTGCCAGAGTATTATACAAACAGTTACGAAATTGATTGATGCAGACGACATCGACAGCAAAAACAAAATCTTT
ATTGCAAGGAGAATACCACA

Downstream 100 bases:

>100_bases
GCCTTGAAAAACAAAAGCCCTGTGCGGAGTTACCGCACAGGGCTTTTTGCTTATTTAGAAGCCCAAGGTAGATAGACTTG
ATGTGTTTCGCTGGTCGGGA

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MATINRWSPVEEALSLRDAMSRLFEESFVAPSAAMRSGLSVDMNVLENANSYIVEAAVPGLKAEDLDITLQENVLTISGE
VRSEKLSEGTTAHRTERRYGRFSRSINLPMLVKGDQISATLEHGILRLDVPKAEEVKPRKISVHVGPAKELEVNK

Sequences:

>Translated_155_residues
MATINRWSPVEEALSLRDAMSRLFEESFVAPSAAMRSGLSVDMNVLENANSYIVEAAVPGLKAEDLDITLQENVLTISGE
VRSEKLSEGTTAHRTERRYGRFSRSINLPMLVKGDQISATLEHGILRLDVPKAEEVKPRKISVHVGPAKELEVNK
>Mature_154_residues
ATINRWSPVEEALSLRDAMSRLFEESFVAPSAAMRSGLSVDMNVLENANSYIVEAAVPGLKAEDLDITLQENVLTISGEV
RSEKLSEGTTAHRTERRYGRFSRSINLPMLVKGDQISATLEHGILRLDVPKAEEVKPRKISVHVGPAKELEVNK

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17129; Mature: 16998

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATINRWSPVEEALSLRDAMSRLFEESFVAPSAAMRSGLSVDMNVLENANSYIVEAAVPG
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEHHHHHCCCCEEEEECCCC
LKAEDLDITLQENVLTISGEVRSEKLSEGTTAHRTERRYGRFSRSINLPMLVKGDQISAT
CCCCCCEEEEECCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHH
LEHGILRLDVPKAEEVKPRKISVHVGPAKELEVNK
HHCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
ATINRWSPVEEALSLRDAMSRLFEESFVAPSAAMRSGLSVDMNVLENANSYIVEAAVPG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEHHHHHCCCCEEEEECCCC
LKAEDLDITLQENVLTISGEVRSEKLSEGTTAHRTERRYGRFSRSINLPMLVKGDQISAT
CCCCCCEEEEECCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHH
LEHGILRLDVPKAEEVKPRKISVHVGPAKELEVNK
HHCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA