| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897430
Identifier: 159897430
GI number: 159897430
Start: 1033456
End: 1034151
Strand: Direct
Name: 159897430
Synonym: Haur_0901
Alternate gene names: NA
Gene position: 1033456-1034151 (Clockwise)
Preceding gene: 159897429
Following gene: 159897434
Centisome position: 16.28
GC content: 49.71
Gene sequence:
>696_bases ATGCTGAATCCAGCTCAATTTCAAGTGTTGACCTTTGATTGTTATGGCACATTGATCGATTGGGAAACTGGTTTGTGGGC GGCGCTTGAGCCAATTTTTGCTCGCTACAATATCAACATCGAGCAAGAAGCGGCTTTGCAATTGTATGGCGAGCTAGAAA GTGCGCTCGAAGCAGGCCCATATTTGGCCTATAAAACGGTGGTAGCAACCGTATTAGGGCAACTTGGTCAGCGCTTGGGC TTCACGCCAACCGCCGAAGAATGTGCTGAATTTGGCTTGTCGGTCAAGCAATGGCCAGCTTTTACCGACTCGCCAGCAGC CTTGCAACGCTTGCAACAACGCTATAAATTGGCGATCATCTCAAATGTTGATGATGATTTGTTTGCGGCTTCGGAGCAAC GCTTGGGCCTGAAATTCGATTGGATTATTACGGCGCAACAGGTGCAATCGTACAAGCCGTCGTTGAATAATTTTCAGCGA GCCTTTGAACGTTTAGCCTTGCCGCAAAGCGCAATTTTGCATGTGGCCCAAAGTTTGTTTCACGATATTGTGCCAGCCAA TCAACTTGGCTTGAACACGGTTTGGGTCAATCGTCGCCATTCTAACCCTGGTTTTGGGGCAACGCCTGCCGCCGAAGCCC AGCCCGATTTGGTTGTGCCAAGTTTGGCCGCCTTGGCTGATGCCTTGGGTTGCTAA
Upstream 100 bases:
>100_bases GGCAAAGTTGTTGTGACTTTGCATTTGCATTAATCTGTAAGTTTACGACCCGCGCTTATCGTTGCTGATAGGCGCGGGTT CTTTGTAGTTGGAGTATTTA
Downstream 100 bases:
>100_bases ATCTGCTGCCAGCACTATTGGTGCTGATAGTGCTGGCGTTTTGATTAAGCTTGATTTGGCGTTGCCAAAAGTGCTATCGA TGCAGTTAAATCTTCGCTGA
Product: haloacid dehalogenase I
Products: NA
Alternate protein names: HAD Family Hydrolase; 2-Haloalkanoic Acid Dehalogenase; Hydrolase; HAD-Superfamily Hydrolase; Dehalogenase; Haloalkanoic Acid Dehalogenase; 2-Haloacid Dehalogenase; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase; Haloacid Dehalogenase I; Hydrolase Of HAD Superfamily; Haloacid Dehydrogenase; 2-Haloacid Halidohydrolase Type II; 2-Haloacid Halidohydrolase IVa; 2-Haloacid Halidohydrolase IVA; 2-Haloacid Dehalogenase Protein; Dehalogenase Protein; 2-Haloalkanoic Acid Dehalogenase Protein; HAD Family Phosphatase; HAD Superfamily Haloalkanoic Acid Dehalogenase
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLNPAQFQVLTFDCYGTLIDWETGLWAALEPIFARYNINIEQEAALQLYGELESALEAGPYLAYKTVVATVLGQLGQRLG FTPTAEECAEFGLSVKQWPAFTDSPAALQRLQQRYKLAIISNVDDDLFAASEQRLGLKFDWIITAQQVQSYKPSLNNFQR AFERLALPQSAILHVAQSLFHDIVPANQLGLNTVWVNRRHSNPGFGATPAAEAQPDLVVPSLAALADALGC
Sequences:
>Translated_231_residues MLNPAQFQVLTFDCYGTLIDWETGLWAALEPIFARYNINIEQEAALQLYGELESALEAGPYLAYKTVVATVLGQLGQRLG FTPTAEECAEFGLSVKQWPAFTDSPAALQRLQQRYKLAIISNVDDDLFAASEQRLGLKFDWIITAQQVQSYKPSLNNFQR AFERLALPQSAILHVAQSLFHDIVPANQLGLNTVWVNRRHSNPGFGATPAAEAQPDLVVPSLAALADALGC >Mature_231_residues MLNPAQFQVLTFDCYGTLIDWETGLWAALEPIFARYNINIEQEAALQLYGELESALEAGPYLAYKTVVATVLGQLGQRLG FTPTAEECAEFGLSVKQWPAFTDSPAALQRLQQRYKLAIISNVDDDLFAASEQRLGLKFDWIITAQQVQSYKPSLNNFQR AFERLALPQSAILHVAQSLFHDIVPANQLGLNTVWVNRRHSNPGFGATPAAEAQPDLVVPSLAALADALGC
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25438; Mature: 25438
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNPAQFQVLTFDCYGTLIDWETGLWAALEPIFARYNINIEQEAALQLYGELESALEAGP CCCCCEEEEEEEEECCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC YLAYKTVVATVLGQLGQRLGFTPTAEECAEFGLSVKQWPAFTDSPAALQRLQQRYKLAII HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHC SNVDDDLFAASEQRLGLKFDWIITAQQVQSYKPSLNNFQRAFERLALPQSAILHVAQSLF CCCCHHHHHHHHHCCCCEEEHEEEHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH HDIVPANQLGLNTVWVNRRHSNPGFGATPAAEAQPDLVVPSLAALADALGC HHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLNPAQFQVLTFDCYGTLIDWETGLWAALEPIFARYNINIEQEAALQLYGELESALEAGP CCCCCEEEEEEEEECCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC YLAYKTVVATVLGQLGQRLGFTPTAEECAEFGLSVKQWPAFTDSPAALQRLQQRYKLAII HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHC SNVDDDLFAASEQRLGLKFDWIITAQQVQSYKPSLNNFQRAFERLALPQSAILHVAQSLF CCCCHHHHHHHHHCCCCEEEHEEEHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH HDIVPANQLGLNTVWVNRRHSNPGFGATPAAEAQPDLVVPSLAALADALGC HHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA