The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897429

Identifier: 159897429

GI number: 159897429

Start: 1031727

End: 1033388

Strand: Direct

Name: 159897429

Synonym: Haur_0900

Alternate gene names: NA

Gene position: 1031727-1033388 (Clockwise)

Preceding gene: 159897428

Following gene: 159897430

Centisome position: 16.26

GC content: 56.08

Gene sequence:

>1662_bases
ATGAAGTGTCCAAGCTGTGGACATACGAATGATGGTGGCAACCGTTTTTGTGAATATTGTGGTGCACGACTCGATCCGTC
GATGAATCAAGAAGCAACCCAAATCGGGGCAGTTCCCAATTTACATACGGATCAAAGTTACGATGCGCCAACCATGTTTG
TTCCAGCCGATCAGGCTCCTCCTGCGCCACCAGCCCAAGCGGAGCCAGCAGTCGCCAGTGCGCCAGCCGCAAGCTCGCTC
AACTGCGCTGAATGTGGCTATATCAATCAACCAGGCGACCGCTATTGCGATCAGTGTGGAGCCTCACTCGATGCCGCTCC
TGTCGCTGTTGTTCCAGTGACTACGCCTGCGCCAGTTGCCAGTGAAGCGCTTACGCCGCCCGATGGTGTGCCAGCCGTAC
CAGTCGCCGAGCCACATTTGGCTGAATTAACCAATGTTGCGCCAGCTGAGGAGTTGCCAACCGTGCCGATTGATGATCAA
CAGCCAGTTTCGACTCCTGTGGCCGAAGCCGAACCAGTTGCGCCAGCCATTGAAGAACCAGTGGTTGCACCTGTAGCCGA
GGCTGAACCAGTGGTGCCTGCGGTTGAAGAACCAATTTCAACCCCTGTGGCCGAGGCCGAACCAGTGGTTGCTCCGGTAG
CTGAAGCCGCCCCAGCAGTTGACGAAGAAGTCGTAGCAGCCGAACGCACTGCTTTATCAGCAGCGGTGATTGAGCAAGAA
GATAATCTGGTGATGTTCGAGCAAATGGCTAATCGGTATGCTGGCCGCGCCTTGCCTGCGCATATCGCCGCTGGCATCGA
AGAAACCAAGGCTAGTCTGGCCGAAGCACAAGCTAATTTGGCGGCGTTTGATCAAGCCCAAGTTGTAGCCAAAGCTGCTG
CTGAAGCCGCTGCTCAGGCTGCCGCCGACGCTGCGGCTGCGGCTGCTGCTCAGCCCGATCCAGAAGAGGTAGCTCGTTTA
GAAGCAGCAATCACCGAACATCAAGATAACTTGGCGATGTTTGAGCAGATGTCAGCTCGTTATGCTGGCCGTGCTTTGCC
AGCCCATATCGCTGCTGGCTTGGAAGAAAGCAAACATGCCTTGGCTGAGGCCGAAGCTGAATTAGCCGCCTTGCTTGGTG
GTGCACCCGCTGCACCTGCTGCTGCGCCAATTCCTTCAGCTCCGGTCAATACCTATGATGCGCCAACGGTTGCTGCGGCT
GCCCCAGCTGAACCAGCGCCAGCTCCGGTTGTGCCTGCCGAACCAGTGCCAGCTCCAGTAGTTGAGGCTGTGCCAGCATG
GGCTGCCCCAACGCCTGCCGAGCCAGTCGCTGCTCCGATTGCTCCACCAGCGCAAGTTACCCCGCATTTGGTGGTTGCTG
GCAGCCAAGTGGTGCTCAACTTGCCAACCGATAAGCAAATTTATGTGATTGGCCGTGAAGATCCGATTAGCGGGATTTAT
CCTGAGGTCGATTTGACCAATCATGGCGGCGAAGGCGGTGGGGTCAGCCGTCAGCATGCCCGCTTGCACAATACTGGCGG
CAATTGGACCTTGGAAGATTTGAATAGCACCAACTATTCCAAAGTCAACGGCCAAAAATTGGCTCCGCATGCGCCAGCTC
CGGTCAACCATGGCGATCAACTGCAATTTGGCAAAGTTGTTGTGACTTTGCATTTGCATTAA

Upstream 100 bases:

>100_bases
TGCAATGGTTTTAGCCTGTGTTGTTTTTGCGATAATTGGCGCGGCAAATCAATACTAATATTTGTAGATTCTTGTGTGCT
CCCTTGTTGAAGGAGGAAAT

Downstream 100 bases:

>100_bases
TCTGTAAGTTTACGACCCGCGCTTATCGTTGCTGATAGGCGCGGGTTCTTTGTAGTTGGAGTATTTAATGCTGAATCCAG
CTCAATTTCAAGTGTTGACC

Product: FHA domain-containing protein

Products: NA

Alternate protein names: Forkhead-Associated Protein

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MKCPSCGHTNDGGNRFCEYCGARLDPSMNQEATQIGAVPNLHTDQSYDAPTMFVPADQAPPAPPAQAEPAVASAPAASSL
NCAECGYINQPGDRYCDQCGASLDAAPVAVVPVTTPAPVASEALTPPDGVPAVPVAEPHLAELTNVAPAEELPTVPIDDQ
QPVSTPVAEAEPVAPAIEEPVVAPVAEAEPVVPAVEEPISTPVAEAEPVVAPVAEAAPAVDEEVVAAERTALSAAVIEQE
DNLVMFEQMANRYAGRALPAHIAAGIEETKASLAEAQANLAAFDQAQVVAKAAAEAAAQAAADAAAAAAAQPDPEEVARL
EAAITEHQDNLAMFEQMSARYAGRALPAHIAAGLEESKHALAEAEAELAALLGGAPAAPAAAPIPSAPVNTYDAPTVAAA
APAEPAPAPVVPAEPVPAPVVEAVPAWAAPTPAEPVAAPIAPPAQVTPHLVVAGSQVVLNLPTDKQIYVIGREDPISGIY
PEVDLTNHGGEGGGVSRQHARLHNTGGNWTLEDLNSTNYSKVNGQKLAPHAPAPVNHGDQLQFGKVVVTLHLH

Sequences:

>Translated_553_residues
MKCPSCGHTNDGGNRFCEYCGARLDPSMNQEATQIGAVPNLHTDQSYDAPTMFVPADQAPPAPPAQAEPAVASAPAASSL
NCAECGYINQPGDRYCDQCGASLDAAPVAVVPVTTPAPVASEALTPPDGVPAVPVAEPHLAELTNVAPAEELPTVPIDDQ
QPVSTPVAEAEPVAPAIEEPVVAPVAEAEPVVPAVEEPISTPVAEAEPVVAPVAEAAPAVDEEVVAAERTALSAAVIEQE
DNLVMFEQMANRYAGRALPAHIAAGIEETKASLAEAQANLAAFDQAQVVAKAAAEAAAQAAADAAAAAAAQPDPEEVARL
EAAITEHQDNLAMFEQMSARYAGRALPAHIAAGLEESKHALAEAEAELAALLGGAPAAPAAAPIPSAPVNTYDAPTVAAA
APAEPAPAPVVPAEPVPAPVVEAVPAWAAPTPAEPVAAPIAPPAQVTPHLVVAGSQVVLNLPTDKQIYVIGREDPISGIY
PEVDLTNHGGEGGGVSRQHARLHNTGGNWTLEDLNSTNYSKVNGQKLAPHAPAPVNHGDQLQFGKVVVTLHLH
>Mature_553_residues
MKCPSCGHTNDGGNRFCEYCGARLDPSMNQEATQIGAVPNLHTDQSYDAPTMFVPADQAPPAPPAQAEPAVASAPAASSL
NCAECGYINQPGDRYCDQCGASLDAAPVAVVPVTTPAPVASEALTPPDGVPAVPVAEPHLAELTNVAPAEELPTVPIDDQ
QPVSTPVAEAEPVAPAIEEPVVAPVAEAEPVVPAVEEPISTPVAEAEPVVAPVAEAAPAVDEEVVAAERTALSAAVIEQE
DNLVMFEQMANRYAGRALPAHIAAGIEETKASLAEAQANLAAFDQAQVVAKAAAEAAAQAAADAAAAAAAQPDPEEVARL
EAAITEHQDNLAMFEQMSARYAGRALPAHIAAGLEESKHALAEAEAELAALLGGAPAAPAAAPIPSAPVNTYDAPTVAAA
APAEPAPAPVVPAEPVPAPVVEAVPAWAAPTPAEPVAAPIAPPAQVTPHLVVAGSQVVLNLPTDKQIYVIGREDPISGIY
PEVDLTNHGGEGGGVSRQHARLHNTGGNWTLEDLNSTNYSKVNGQKLAPHAPAPVNHGDQLQFGKVVVTLHLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56199; Mature: 56199

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCPSCGHTNDGGNRFCEYCGARLDPSMNQEATQIGAVPNLHTDQSYDAPTMFVPADQAP
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCC
PAPPAQAEPAVASAPAASSLNCAECGYINQPGDRYCDQCGASLDAAPVAVVPVTTPAPVA
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCH
SEALTPPDGVPAVPVAEPHLAELTNVAPAEELPTVPIDDQQPVSTPVAEAEPVAPAIEEP
HHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
VVAPVAEAEPVVPAVEEPISTPVAEAEPVVAPVAEAAPAVDEEVVAAERTALSAAVIEQE
CCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHECCC
DNLVMFEQMANRYAGRALPAHIAAGIEETKASLAEAQANLAAFDQAQVVAKAAAEAAAQA
CCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AADAAAAAAAQPDPEEVARLEAAITEHQDNLAMFEQMSARYAGRALPAHIAAGLEESKHA
HHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LAEAEAELAALLGGAPAAPAAAPIPSAPVNTYDAPTVAAAAPAEPAPAPVVPAEPVPAPV
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHH
VEAVPAWAAPTPAEPVAAPIAPPAQVTPHLVVAGSQVVLNLPTDKQIYVIGREDPISGIY
HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCEEEEEECCCCCCCCC
PEVDLTNHGGEGGGVSRQHARLHNTGGNWTLEDLNSTNYSKVNGQKLAPHAPAPVNHGDQ
CCCEECCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
LQFGKVVVTLHLH
EEECEEEEEEEEC
>Mature Secondary Structure
MKCPSCGHTNDGGNRFCEYCGARLDPSMNQEATQIGAVPNLHTDQSYDAPTMFVPADQAP
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCC
PAPPAQAEPAVASAPAASSLNCAECGYINQPGDRYCDQCGASLDAAPVAVVPVTTPAPVA
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCH
SEALTPPDGVPAVPVAEPHLAELTNVAPAEELPTVPIDDQQPVSTPVAEAEPVAPAIEEP
HHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
VVAPVAEAEPVVPAVEEPISTPVAEAEPVVAPVAEAAPAVDEEVVAAERTALSAAVIEQE
CCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHECCC
DNLVMFEQMANRYAGRALPAHIAAGIEETKASLAEAQANLAAFDQAQVVAKAAAEAAAQA
CCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AADAAAAAAAQPDPEEVARLEAAITEHQDNLAMFEQMSARYAGRALPAHIAAGLEESKHA
HHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LAEAEAELAALLGGAPAAPAAAPIPSAPVNTYDAPTVAAAAPAEPAPAPVVPAEPVPAPV
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHH
VEAVPAWAAPTPAEPVAAPIAPPAQVTPHLVVAGSQVVLNLPTDKQIYVIGREDPISGIY
HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCEEEEEECCCCCCCCC
PEVDLTNHGGEGGGVSRQHARLHNTGGNWTLEDLNSTNYSKVNGQKLAPHAPAPVNHGDQ
CCCEECCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
LQFGKVVVTLHLH
EEECEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA