| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897429
Identifier: 159897429
GI number: 159897429
Start: 1031727
End: 1033388
Strand: Direct
Name: 159897429
Synonym: Haur_0900
Alternate gene names: NA
Gene position: 1031727-1033388 (Clockwise)
Preceding gene: 159897428
Following gene: 159897430
Centisome position: 16.26
GC content: 56.08
Gene sequence:
>1662_bases ATGAAGTGTCCAAGCTGTGGACATACGAATGATGGTGGCAACCGTTTTTGTGAATATTGTGGTGCACGACTCGATCCGTC GATGAATCAAGAAGCAACCCAAATCGGGGCAGTTCCCAATTTACATACGGATCAAAGTTACGATGCGCCAACCATGTTTG TTCCAGCCGATCAGGCTCCTCCTGCGCCACCAGCCCAAGCGGAGCCAGCAGTCGCCAGTGCGCCAGCCGCAAGCTCGCTC AACTGCGCTGAATGTGGCTATATCAATCAACCAGGCGACCGCTATTGCGATCAGTGTGGAGCCTCACTCGATGCCGCTCC TGTCGCTGTTGTTCCAGTGACTACGCCTGCGCCAGTTGCCAGTGAAGCGCTTACGCCGCCCGATGGTGTGCCAGCCGTAC CAGTCGCCGAGCCACATTTGGCTGAATTAACCAATGTTGCGCCAGCTGAGGAGTTGCCAACCGTGCCGATTGATGATCAA CAGCCAGTTTCGACTCCTGTGGCCGAAGCCGAACCAGTTGCGCCAGCCATTGAAGAACCAGTGGTTGCACCTGTAGCCGA GGCTGAACCAGTGGTGCCTGCGGTTGAAGAACCAATTTCAACCCCTGTGGCCGAGGCCGAACCAGTGGTTGCTCCGGTAG CTGAAGCCGCCCCAGCAGTTGACGAAGAAGTCGTAGCAGCCGAACGCACTGCTTTATCAGCAGCGGTGATTGAGCAAGAA GATAATCTGGTGATGTTCGAGCAAATGGCTAATCGGTATGCTGGCCGCGCCTTGCCTGCGCATATCGCCGCTGGCATCGA AGAAACCAAGGCTAGTCTGGCCGAAGCACAAGCTAATTTGGCGGCGTTTGATCAAGCCCAAGTTGTAGCCAAAGCTGCTG CTGAAGCCGCTGCTCAGGCTGCCGCCGACGCTGCGGCTGCGGCTGCTGCTCAGCCCGATCCAGAAGAGGTAGCTCGTTTA GAAGCAGCAATCACCGAACATCAAGATAACTTGGCGATGTTTGAGCAGATGTCAGCTCGTTATGCTGGCCGTGCTTTGCC AGCCCATATCGCTGCTGGCTTGGAAGAAAGCAAACATGCCTTGGCTGAGGCCGAAGCTGAATTAGCCGCCTTGCTTGGTG GTGCACCCGCTGCACCTGCTGCTGCGCCAATTCCTTCAGCTCCGGTCAATACCTATGATGCGCCAACGGTTGCTGCGGCT GCCCCAGCTGAACCAGCGCCAGCTCCGGTTGTGCCTGCCGAACCAGTGCCAGCTCCAGTAGTTGAGGCTGTGCCAGCATG GGCTGCCCCAACGCCTGCCGAGCCAGTCGCTGCTCCGATTGCTCCACCAGCGCAAGTTACCCCGCATTTGGTGGTTGCTG GCAGCCAAGTGGTGCTCAACTTGCCAACCGATAAGCAAATTTATGTGATTGGCCGTGAAGATCCGATTAGCGGGATTTAT CCTGAGGTCGATTTGACCAATCATGGCGGCGAAGGCGGTGGGGTCAGCCGTCAGCATGCCCGCTTGCACAATACTGGCGG CAATTGGACCTTGGAAGATTTGAATAGCACCAACTATTCCAAAGTCAACGGCCAAAAATTGGCTCCGCATGCGCCAGCTC CGGTCAACCATGGCGATCAACTGCAATTTGGCAAAGTTGTTGTGACTTTGCATTTGCATTAA
Upstream 100 bases:
>100_bases TGCAATGGTTTTAGCCTGTGTTGTTTTTGCGATAATTGGCGCGGCAAATCAATACTAATATTTGTAGATTCTTGTGTGCT CCCTTGTTGAAGGAGGAAAT
Downstream 100 bases:
>100_bases TCTGTAAGTTTACGACCCGCGCTTATCGTTGCTGATAGGCGCGGGTTCTTTGTAGTTGGAGTATTTAATGCTGAATCCAG CTCAATTTCAAGTGTTGACC
Product: FHA domain-containing protein
Products: NA
Alternate protein names: Forkhead-Associated Protein
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MKCPSCGHTNDGGNRFCEYCGARLDPSMNQEATQIGAVPNLHTDQSYDAPTMFVPADQAPPAPPAQAEPAVASAPAASSL NCAECGYINQPGDRYCDQCGASLDAAPVAVVPVTTPAPVASEALTPPDGVPAVPVAEPHLAELTNVAPAEELPTVPIDDQ QPVSTPVAEAEPVAPAIEEPVVAPVAEAEPVVPAVEEPISTPVAEAEPVVAPVAEAAPAVDEEVVAAERTALSAAVIEQE DNLVMFEQMANRYAGRALPAHIAAGIEETKASLAEAQANLAAFDQAQVVAKAAAEAAAQAAADAAAAAAAQPDPEEVARL EAAITEHQDNLAMFEQMSARYAGRALPAHIAAGLEESKHALAEAEAELAALLGGAPAAPAAAPIPSAPVNTYDAPTVAAA APAEPAPAPVVPAEPVPAPVVEAVPAWAAPTPAEPVAAPIAPPAQVTPHLVVAGSQVVLNLPTDKQIYVIGREDPISGIY PEVDLTNHGGEGGGVSRQHARLHNTGGNWTLEDLNSTNYSKVNGQKLAPHAPAPVNHGDQLQFGKVVVTLHLH
Sequences:
>Translated_553_residues MKCPSCGHTNDGGNRFCEYCGARLDPSMNQEATQIGAVPNLHTDQSYDAPTMFVPADQAPPAPPAQAEPAVASAPAASSL NCAECGYINQPGDRYCDQCGASLDAAPVAVVPVTTPAPVASEALTPPDGVPAVPVAEPHLAELTNVAPAEELPTVPIDDQ QPVSTPVAEAEPVAPAIEEPVVAPVAEAEPVVPAVEEPISTPVAEAEPVVAPVAEAAPAVDEEVVAAERTALSAAVIEQE DNLVMFEQMANRYAGRALPAHIAAGIEETKASLAEAQANLAAFDQAQVVAKAAAEAAAQAAADAAAAAAAQPDPEEVARL EAAITEHQDNLAMFEQMSARYAGRALPAHIAAGLEESKHALAEAEAELAALLGGAPAAPAAAPIPSAPVNTYDAPTVAAA APAEPAPAPVVPAEPVPAPVVEAVPAWAAPTPAEPVAAPIAPPAQVTPHLVVAGSQVVLNLPTDKQIYVIGREDPISGIY PEVDLTNHGGEGGGVSRQHARLHNTGGNWTLEDLNSTNYSKVNGQKLAPHAPAPVNHGDQLQFGKVVVTLHLH >Mature_553_residues MKCPSCGHTNDGGNRFCEYCGARLDPSMNQEATQIGAVPNLHTDQSYDAPTMFVPADQAPPAPPAQAEPAVASAPAASSL NCAECGYINQPGDRYCDQCGASLDAAPVAVVPVTTPAPVASEALTPPDGVPAVPVAEPHLAELTNVAPAEELPTVPIDDQ QPVSTPVAEAEPVAPAIEEPVVAPVAEAEPVVPAVEEPISTPVAEAEPVVAPVAEAAPAVDEEVVAAERTALSAAVIEQE DNLVMFEQMANRYAGRALPAHIAAGIEETKASLAEAQANLAAFDQAQVVAKAAAEAAAQAAADAAAAAAAQPDPEEVARL EAAITEHQDNLAMFEQMSARYAGRALPAHIAAGLEESKHALAEAEAELAALLGGAPAAPAAAPIPSAPVNTYDAPTVAAA APAEPAPAPVVPAEPVPAPVVEAVPAWAAPTPAEPVAAPIAPPAQVTPHLVVAGSQVVLNLPTDKQIYVIGREDPISGIY PEVDLTNHGGEGGGVSRQHARLHNTGGNWTLEDLNSTNYSKVNGQKLAPHAPAPVNHGDQLQFGKVVVTLHLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56199; Mature: 56199
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCPSCGHTNDGGNRFCEYCGARLDPSMNQEATQIGAVPNLHTDQSYDAPTMFVPADQAP CCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCC PAPPAQAEPAVASAPAASSLNCAECGYINQPGDRYCDQCGASLDAAPVAVVPVTTPAPVA CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCH SEALTPPDGVPAVPVAEPHLAELTNVAPAEELPTVPIDDQQPVSTPVAEAEPVAPAIEEP HHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCC VVAPVAEAEPVVPAVEEPISTPVAEAEPVVAPVAEAAPAVDEEVVAAERTALSAAVIEQE CCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHECCC DNLVMFEQMANRYAGRALPAHIAAGIEETKASLAEAQANLAAFDQAQVVAKAAAEAAAQA CCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AADAAAAAAAQPDPEEVARLEAAITEHQDNLAMFEQMSARYAGRALPAHIAAGLEESKHA HHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LAEAEAELAALLGGAPAAPAAAPIPSAPVNTYDAPTVAAAAPAEPAPAPVVPAEPVPAPV HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHH VEAVPAWAAPTPAEPVAAPIAPPAQVTPHLVVAGSQVVLNLPTDKQIYVIGREDPISGIY HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCEEEEEECCCCCCCCC PEVDLTNHGGEGGGVSRQHARLHNTGGNWTLEDLNSTNYSKVNGQKLAPHAPAPVNHGDQ CCCEECCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC LQFGKVVVTLHLH EEECEEEEEEEEC >Mature Secondary Structure MKCPSCGHTNDGGNRFCEYCGARLDPSMNQEATQIGAVPNLHTDQSYDAPTMFVPADQAP CCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCC PAPPAQAEPAVASAPAASSLNCAECGYINQPGDRYCDQCGASLDAAPVAVVPVTTPAPVA CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCH SEALTPPDGVPAVPVAEPHLAELTNVAPAEELPTVPIDDQQPVSTPVAEAEPVAPAIEEP HHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCC VVAPVAEAEPVVPAVEEPISTPVAEAEPVVAPVAEAAPAVDEEVVAAERTALSAAVIEQE CCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHECCC DNLVMFEQMANRYAGRALPAHIAAGIEETKASLAEAQANLAAFDQAQVVAKAAAEAAAQA CCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AADAAAAAAAQPDPEEVARLEAAITEHQDNLAMFEQMSARYAGRALPAHIAAGLEESKHA HHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LAEAEAELAALLGGAPAAPAAAPIPSAPVNTYDAPTVAAAAPAEPAPAPVVPAEPVPAPV HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHH VEAVPAWAAPTPAEPVAAPIAPPAQVTPHLVVAGSQVVLNLPTDKQIYVIGREDPISGIY HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCEEEEEECCCCCCCCC PEVDLTNHGGEGGGVSRQHARLHNTGGNWTLEDLNSTNYSKVNGQKLAPHAPAPVNHGDQ CCCEECCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC LQFGKVVVTLHLH EEECEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA