| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yihS [C]
Identifier: 159897416
GI number: 159897416
Start: 1012762
End: 1014012
Strand: Reverse
Name: yihS [C]
Synonym: Haur_0887
Alternate gene names: 159897416
Gene position: 1014012-1012762 (Counterclockwise)
Preceding gene: 159897417
Following gene: 159897415
Centisome position: 15.98
GC content: 51.0
Gene sequence:
>1251_bases ATGGCGAATCTCGTAGATGGCGGCTTTGATCATGGCTTGCGCGAAATGTGGCAAGCGCAGTTTCGCGATGAAGTGTTGGG CAATATTTTGCCATTTTGGGCAAACCACACGCTTGATCATGAGCACGGTGGCTTTTATGGCGGCTTAACCAACGATCTGA CAATCCATAATGAGTTTCCTCGCTCAGCCGTATTATGTGGTCGGATTCTCTGGACGTTTGCCTGTGCCTATCGCATGCTC GGCGATCCCCGCGATTTGGCGGTGGCTGAGTATGCCTATGCCTACCTCAAACAGGCTTTTTGGGATCAAACTTATGGCGG ATTGTATTGGTCGATCGATGCCAACGGCCAGCCTTTGGCCGACCATAAACAAACCTATGCTCAATCGTTCGCCATCTACG GGTTGGCCGAGTATGTTCGAGCTACAGGCGATCAGAGCGCCTTGGAATTGGCGCAAACCCTGTTTCACTTGATCGAAAAT CATGCCTTTGATGCGGTTTATGGTGGCTATATCGAGGGCTGTGATCGGGTTTGGCAACCCTTGGGCGATAGCCGCCTGAG CAAGCTTGAGCCAGAAGCCCGCAAAACCATGAACACCATGTTGCATATGATGGAGGCCTATGCCAACTTGCTGCGAGTTT GGGATGTGGCCGATGTGCGCCAGCAATTGGCCAGCCTGATCGAGGCCTGCTGCGAACATATTATCGACCCTGTGCAAGGC CGCTTTCATCTATTTTTCGATGACCAATGGAACCACCACGAACATGGTATTTCGTATGGCCACGATATCGAAGGCAGTTG GTTATTGATGGAAGCAGCCCATGTGTTGGGCGATGAACACTTAATTGCCAAGGCCGAAACTTTAGCGATTGGCATGGCCG ATGCGGTCTATCGCAATGGCCGCCACGCCGATGGCAGCATTATTCACGAACGCGCTCCCGATGGCTCGATTAATTTGGAA CGCCATTGGTGGCCCCAAGCTGAAGCCGTTGTTGGCTTCTACAACGCCTATCAGGCCACTGGCAAACCTGAGTTTGCTCA AGCCGCCTACGATAGTTGGAATTTTATTCAACGCTATTTTATCGACCACGATCATGGTGATTGGTTCAAAATTCTTGATG CTCAAAACCAACCGTTGGGAGCGATTCCAAAAGTTGGCCCATGGGAATGCCCGTATCACCATGCCCGCGTTTGTTTTGAA ATGATCGAACGTTTAGCTGAACACAACGTGAGTGTTCAGATGCGAGGGTAA
Upstream 100 bases:
>100_bases ATGCTCGCTACGAAGATGTTGATGGCTACTCCGTTGACCGTGATTTACTCGATTTGCTCCTCGCTGCCCGTATACCCGAA GCGCCAGAAGGAATACAATA
Downstream 100 bases:
>100_bases CTGCCATGCATTTTGATATGCCCTTAGAACAACTGCGCGAATATCGCCCTGATCGCAACGAGCCAGCCGATTTTGACCAA TTTTGGCAAACCACTTTAGC
Product: N-acylglucosamine 2-epimerase
Products: NA
Alternate protein names: N-Acyl-D-Glucosamine 2-Epimerase; N-Acylglucosamine 2-Epimerase Family Protein; N-Acylglucosamine 2-Epimerase Superfamily; Glucose-6-Phosphate Isomerase; LOW QUALITY PROTEIN N-Acyl-D-Glucosamine 2-Epimerase; N-Acyl-D-Glucosamine 2-Epimerase-Like Protein; Mannose-6-Phosphate Isomerase
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MANLVDGGFDHGLREMWQAQFRDEVLGNILPFWANHTLDHEHGGFYGGLTNDLTIHNEFPRSAVLCGRILWTFACAYRML GDPRDLAVAEYAYAYLKQAFWDQTYGGLYWSIDANGQPLADHKQTYAQSFAIYGLAEYVRATGDQSALELAQTLFHLIEN HAFDAVYGGYIEGCDRVWQPLGDSRLSKLEPEARKTMNTMLHMMEAYANLLRVWDVADVRQQLASLIEACCEHIIDPVQG RFHLFFDDQWNHHEHGISYGHDIEGSWLLMEAAHVLGDEHLIAKAETLAIGMADAVYRNGRHADGSIIHERAPDGSINLE RHWWPQAEAVVGFYNAYQATGKPEFAQAAYDSWNFIQRYFIDHDHGDWFKILDAQNQPLGAIPKVGPWECPYHHARVCFE MIERLAEHNVSVQMRG
Sequences:
>Translated_416_residues MANLVDGGFDHGLREMWQAQFRDEVLGNILPFWANHTLDHEHGGFYGGLTNDLTIHNEFPRSAVLCGRILWTFACAYRML GDPRDLAVAEYAYAYLKQAFWDQTYGGLYWSIDANGQPLADHKQTYAQSFAIYGLAEYVRATGDQSALELAQTLFHLIEN HAFDAVYGGYIEGCDRVWQPLGDSRLSKLEPEARKTMNTMLHMMEAYANLLRVWDVADVRQQLASLIEACCEHIIDPVQG RFHLFFDDQWNHHEHGISYGHDIEGSWLLMEAAHVLGDEHLIAKAETLAIGMADAVYRNGRHADGSIIHERAPDGSINLE RHWWPQAEAVVGFYNAYQATGKPEFAQAAYDSWNFIQRYFIDHDHGDWFKILDAQNQPLGAIPKVGPWECPYHHARVCFE MIERLAEHNVSVQMRG >Mature_415_residues ANLVDGGFDHGLREMWQAQFRDEVLGNILPFWANHTLDHEHGGFYGGLTNDLTIHNEFPRSAVLCGRILWTFACAYRMLG DPRDLAVAEYAYAYLKQAFWDQTYGGLYWSIDANGQPLADHKQTYAQSFAIYGLAEYVRATGDQSALELAQTLFHLIENH AFDAVYGGYIEGCDRVWQPLGDSRLSKLEPEARKTMNTMLHMMEAYANLLRVWDVADVRQQLASLIEACCEHIIDPVQGR FHLFFDDQWNHHEHGISYGHDIEGSWLLMEAAHVLGDEHLIAKAETLAIGMADAVYRNGRHADGSIIHERAPDGSINLER HWWPQAEAVVGFYNAYQATGKPEFAQAAYDSWNFIQRYFIDHDHGDWFKILDAQNQPLGAIPKVGPWECPYHHARVCFEM IERLAEHNVSVQMRG
Specific function: Unknown
COG id: COG2942
COG function: function code G; N-acyl-D-glucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082342, Length=353, Percent_Identity=26.3456090651558, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.-.-.- [C]
Molecular weight: Translated: 47470; Mature: 47338
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLVDGGFDHGLREMWQAQFRDEVLGNILPFWANHTLDHEHGGFYGGLTNDLTIHNEFP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEECCCCC RSAVLCGRILWTFACAYRMLGDPRDLAVAEYAYAYLKQAFWDQTYGGLYWSIDANGQPLA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCH DHKQTYAQSFAIYGLAEYVRATGDQSALELAQTLFHLIENHAFDAVYGGYIEGCDRVWQP HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC LGDSRLSKLEPEARKTMNTMLHMMEAYANLLRVWDVADVRQQLASLIEACCEHIIDPVQG CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RFHLFFDDQWNHHEHGISYGHDIEGSWLLMEAAHVLGDEHLIAKAETLAIGMADAVYRNG CEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC RHADGSIIHERAPDGSINLERHWWPQAEAVVGFYNAYQATGKPEFAQAAYDSWNFIQRYF CCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IDHDHGDWFKILDAQNQPLGAIPKVGPWECPYHHARVCFEMIERLAEHNVSVQMRG HCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECC >Mature Secondary Structure ANLVDGGFDHGLREMWQAQFRDEVLGNILPFWANHTLDHEHGGFYGGLTNDLTIHNEFP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEECCCCC RSAVLCGRILWTFACAYRMLGDPRDLAVAEYAYAYLKQAFWDQTYGGLYWSIDANGQPLA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCH DHKQTYAQSFAIYGLAEYVRATGDQSALELAQTLFHLIENHAFDAVYGGYIEGCDRVWQP HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC LGDSRLSKLEPEARKTMNTMLHMMEAYANLLRVWDVADVRQQLASLIEACCEHIIDPVQG CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RFHLFFDDQWNHHEHGISYGHDIEGSWLLMEAAHVLGDEHLIAKAETLAIGMADAVYRNG CEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC RHADGSIIHERAPDGSINLERHWWPQAEAVVGFYNAYQATGKPEFAQAAYDSWNFIQRYF CCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IDHDHGDWFKILDAQNQPLGAIPKVGPWECPYHHARVCFEMIERLAEHNVSVQMRG HCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA