The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897396

Identifier: 159897396

GI number: 159897396

Start: 985588

End: 986505

Strand: Reverse

Name: 159897396

Synonym: Haur_0867

Alternate gene names: NA

Gene position: 986505-985588 (Counterclockwise)

Preceding gene: 159897397

Following gene: 159897395

Centisome position: 15.54

GC content: 48.91

Gene sequence:

>918_bases
ATGCAAACTGCCGTTCCTGATATTCGAATTATGGCCTTGCGCCGTTTTGCCATCGCCATCAGCTTGCTGAATATTCTTGG
TCGCACGATTTTTGGCTTTGAGCAGCCATGGTCGTATGTATTGGCGGCCTTAGCAACCACCTATAGCCTTGAAATTGTGT
TTGAAGTGATGCTGGCTCGCCAGCAAAAGCAGCAGCCCAATTTCATGGGTGGTTTTGGCAAATTGGTTGATTTTCTGTTG
CCAGCCCACATTTCGGGCTTGGCAATTAGTATGTTGCTGTATTCGAATCAGCGGGTTACTCCAATTATTTTTGCTGCTGC
CGTGGCAATTTGCTCCAAAATTTTGTTGCGTGCGCCGCTAGGTAAGGGCTATCGCCACTTTCTCAACCCATCAAATTTTG
GCATTACCGTGACCTTGCTGCTATTTACGTCGGTGGCGAGCGCTCCGGCTTACCACTTTACCGAAAATCTGTATGGCGTA
GCCGATTTGTTGCTGCCTTTGGTGATTATCATCAGCGGCTCGTTTTTGAACATCAATTTCACCAAACGCCTACCATTAAT
TATCGGCTGGGTTGGCGGGTTTGTCTTGCAAGGGCTATTTGCCATGTTCGTGACTGGACATAGTTTGAATGCCTCGCTCT
TGCCGATGAGCAGTTTAGCCTTTGCCCTCTTTACCTTCTATATGATCACCGATCCAGGTACAACGCCCAGCCGTGGTTGG
ATGCAATTCGCCTTTGGCGCGAGCGTCGCAGCAGTGTATCGCCTATTGATCATTTTGCACATTCCCTACACGCTGTTTAT
TGCCCTGACCTTGGTGTGTATTGTGCGTGGAGCCTATTTGCACTACCACGCTTGGAACACCAAACGCCTGGCAGCAACCC
AAAATCAACCCAACCTAGCCTCAGGAGCAGAAGCATGA

Upstream 100 bases:

>100_bases
TGGCGTGGCCGCGATGGCAGTGTTCAAACCAGCGTCGTCCAACTCACACCAGGCAACCATACCTTGATACTTGGCCAATA
ATTGCGCAAGGAGTTTTTGT

Downstream 100 bases:

>100_bases
GCCACGCTATTGCCATCGTCGGGGTGGCATGTCGCTACCCCGATGCCGATTCACCCAAGGCTCTTTGGGAAATGGCCCTT
GCCAAACGCCGCGCTTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MQTAVPDIRIMALRRFAIAISLLNILGRTIFGFEQPWSYVLAALATTYSLEIVFEVMLARQQKQQPNFMGGFGKLVDFLL
PAHISGLAISMLLYSNQRVTPIIFAAAVAICSKILLRAPLGKGYRHFLNPSNFGITVTLLLFTSVASAPAYHFTENLYGV
ADLLLPLVIIISGSFLNINFTKRLPLIIGWVGGFVLQGLFAMFVTGHSLNASLLPMSSLAFALFTFYMITDPGTTPSRGW
MQFAFGASVAAVYRLLIILHIPYTLFIALTLVCIVRGAYLHYHAWNTKRLAATQNQPNLASGAEA

Sequences:

>Translated_305_residues
MQTAVPDIRIMALRRFAIAISLLNILGRTIFGFEQPWSYVLAALATTYSLEIVFEVMLARQQKQQPNFMGGFGKLVDFLL
PAHISGLAISMLLYSNQRVTPIIFAAAVAICSKILLRAPLGKGYRHFLNPSNFGITVTLLLFTSVASAPAYHFTENLYGV
ADLLLPLVIIISGSFLNINFTKRLPLIIGWVGGFVLQGLFAMFVTGHSLNASLLPMSSLAFALFTFYMITDPGTTPSRGW
MQFAFGASVAAVYRLLIILHIPYTLFIALTLVCIVRGAYLHYHAWNTKRLAATQNQPNLASGAEA
>Mature_305_residues
MQTAVPDIRIMALRRFAIAISLLNILGRTIFGFEQPWSYVLAALATTYSLEIVFEVMLARQQKQQPNFMGGFGKLVDFLL
PAHISGLAISMLLYSNQRVTPIIFAAAVAICSKILLRAPLGKGYRHFLNPSNFGITVTLLLFTSVASAPAYHFTENLYGV
ADLLLPLVIIISGSFLNINFTKRLPLIIGWVGGFVLQGLFAMFVTGHSLNASLLPMSSLAFALFTFYMITDPGTTPSRGW
MQFAFGASVAAVYRLLIILHIPYTLFIALTLVCIVRGAYLHYHAWNTKRLAATQNQPNLASGAEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33511; Mature: 33511

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTAVPDIRIMALRRFAIAISLLNILGRTIFGFEQPWSYVLAALATTYSLEIVFEVMLAR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QQKQQPNFMGGFGKLVDFLLPAHISGLAISMLLYSNQRVTPIIFAAAVAICSKILLRAPL
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
GKGYRHFLNPSNFGITVTLLLFTSVASAPAYHFTENLYGVADLLLPLVIIISGSFLNINF
CCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
TKRLPLIIGWVGGFVLQGLFAMFVTGHSLNASLLPMSSLAFALFTFYMITDPGTTPSRGW
HHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCH
MQFAFGASVAAVYRLLIILHIPYTLFIALTLVCIVRGAYLHYHAWNTKRLAATQNQPNLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCCCC
SGAEA
CCCCC
>Mature Secondary Structure
MQTAVPDIRIMALRRFAIAISLLNILGRTIFGFEQPWSYVLAALATTYSLEIVFEVMLAR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QQKQQPNFMGGFGKLVDFLLPAHISGLAISMLLYSNQRVTPIIFAAAVAICSKILLRAPL
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
GKGYRHFLNPSNFGITVTLLLFTSVASAPAYHFTENLYGVADLLLPLVIIISGSFLNINF
CCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
TKRLPLIIGWVGGFVLQGLFAMFVTGHSLNASLLPMSSLAFALFTFYMITDPGTTPSRGW
HHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCH
MQFAFGASVAAVYRLLIILHIPYTLFIALTLVCIVRGAYLHYHAWNTKRLAATQNQPNLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCCCC
SGAEA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA