The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897385

Identifier: 159897385

GI number: 159897385

Start: 969042

End: 970256

Strand: Reverse

Name: 159897385

Synonym: Haur_0856

Alternate gene names: NA

Gene position: 970256-969042 (Counterclockwise)

Preceding gene: 159897388

Following gene: 159897384

Centisome position: 15.29

GC content: 52.18

Gene sequence:

>1215_bases
ATGCGCCGTTTCGCCACAGTCTTTGCGCTGTGTAGCATTTTAAGCTTTACTTTGCCCTCAATTGCTGCCGCTTGTGGAGC
GTTGATTCCCGCCGACGATCAGATTCGCCAAGCTGGCCTCAACGTGATTTTTGCTGTCGATGGCCAAGCCAACCAAACCA
CCGCCTATATTCAAATTAACTATGTTGGCGATCCCGCTGAGTTTGCTTGGATCTTGCCAGTGCCCAGTAATCCCAAGGTC
GATGTGATTGAAGCTAGCACGTTTGCTGAATTACATACTCTGACCGATCCACGGGTGACCTTCCCTTCGCCACCTGAATG
TTTTCCGGCGATCGTTGGAGCAGCACCCGATGGCGCTGGTCAAGCACCAAATGTGTTGCAACAAGGTCAAGTCGGCCCCT
ACGACTACAGCGTAATTGAGGATCGTGATCCAGCGGCGCTTGAAACATGGCTCAAAACCAACGGCTATCAAACTCCAGCT
GGTTTAGAAGCTGCCCTAAAACCCTATACCGAAGCTGGCATGCCGTTGATCGCCATGAAACTTAAGCCTGGCGCTGATAC
CAACGATATTCAACCGGTCGCGATCAGCTTCACGGGCACAACCCCAATGCTGCCGTTGCGCTTAGCAGCCTTGAGCAGCG
AACCCAAAACTCCAATTACGGTCTGGATTTTTGGTGAAGCTCAGGCAATTCCAACCAATACTGAACGCTTTACCATGCGC
GAAAACGATTTGGCGCTGACGGCCTACGATGGCTCGAATAATTATAAAGAATTGCGCAGCGGCGTGTTGGCAAGCGTAGC
GGGCAAAGGCTTTTTGACCGAGTACGCCCAACAAAGCAAATTTCTCAACCCTCAAGATAGCCTGCTGAAGGAATTGACCA
GCAAATATGCCTTCTTGACGCGGTTGTATGCTGAAATTTCACCTGAAGAGATGCTGTTTGATCCAACCTTTGGTTATAGC
CCTGATCTGCCACCACTTTCCAACAACATCGATTTGACCTATCGCGCCGAGCCATACGATTGCGAAACTGCGACCTTGCA
CACGGTGCGTCGCCAGCAATACGATGCGGCCAAAGGCAATCGCTCATCCGAAGAAGAAGCGACTGCCAATTTGCGTCGTG
GCCCCTTGCGCATCGGCACACTGTTGGTGATTGGCGTAACCATGGGTTCGATCTGGCTCTTGGCTCGTCGGCCCAAACGT
CGCCCCAGCGCCTAG

Upstream 100 bases:

>100_bases
AACAACAATGTCCATCACAAGGATCAGGCCTTGGAAGGAATAACAGCATGCAACGCGGCGTGTTATGATTGAGCTTGCAT
ACATTTCAAGGAGGATTTCC

Downstream 100 bases:

>100_bases
AACTACGCTCAACCCCGCTCTCACTGCGGCAGGAGTGGGGCATTCCAAACGTCGTGCTGGGATGCTTCCCCCTCGCTCGG
CGGGAGAGGGGGTCAGGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MRRFATVFALCSILSFTLPSIAAACGALIPADDQIRQAGLNVIFAVDGQANQTTAYIQINYVGDPAEFAWILPVPSNPKV
DVIEASTFAELHTLTDPRVTFPSPPECFPAIVGAAPDGAGQAPNVLQQGQVGPYDYSVIEDRDPAALETWLKTNGYQTPA
GLEAALKPYTEAGMPLIAMKLKPGADTNDIQPVAISFTGTTPMLPLRLAALSSEPKTPITVWIFGEAQAIPTNTERFTMR
ENDLALTAYDGSNNYKELRSGVLASVAGKGFLTEYAQQSKFLNPQDSLLKELTSKYAFLTRLYAEISPEEMLFDPTFGYS
PDLPPLSNNIDLTYRAEPYDCETATLHTVRRQQYDAAKGNRSSEEEATANLRRGPLRIGTLLVIGVTMGSIWLLARRPKR
RPSA

Sequences:

>Translated_404_residues
MRRFATVFALCSILSFTLPSIAAACGALIPADDQIRQAGLNVIFAVDGQANQTTAYIQINYVGDPAEFAWILPVPSNPKV
DVIEASTFAELHTLTDPRVTFPSPPECFPAIVGAAPDGAGQAPNVLQQGQVGPYDYSVIEDRDPAALETWLKTNGYQTPA
GLEAALKPYTEAGMPLIAMKLKPGADTNDIQPVAISFTGTTPMLPLRLAALSSEPKTPITVWIFGEAQAIPTNTERFTMR
ENDLALTAYDGSNNYKELRSGVLASVAGKGFLTEYAQQSKFLNPQDSLLKELTSKYAFLTRLYAEISPEEMLFDPTFGYS
PDLPPLSNNIDLTYRAEPYDCETATLHTVRRQQYDAAKGNRSSEEEATANLRRGPLRIGTLLVIGVTMGSIWLLARRPKR
RPSA
>Mature_404_residues
MRRFATVFALCSILSFTLPSIAAACGALIPADDQIRQAGLNVIFAVDGQANQTTAYIQINYVGDPAEFAWILPVPSNPKV
DVIEASTFAELHTLTDPRVTFPSPPECFPAIVGAAPDGAGQAPNVLQQGQVGPYDYSVIEDRDPAALETWLKTNGYQTPA
GLEAALKPYTEAGMPLIAMKLKPGADTNDIQPVAISFTGTTPMLPLRLAALSSEPKTPITVWIFGEAQAIPTNTERFTMR
ENDLALTAYDGSNNYKELRSGVLASVAGKGFLTEYAQQSKFLNPQDSLLKELTSKYAFLTRLYAEISPEEMLFDPTFGYS
PDLPPLSNNIDLTYRAEPYDCETATLHTVRRQQYDAAKGNRSSEEEATANLRRGPLRIGTLLVIGVTMGSIWLLARRPKR
RPSA

Specific function: Unknown

COG id: COG4402

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43981; Mature: 43981

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFATVFALCSILSFTLPSIAAACGALIPADDQIRQAGLNVIFAVDGQANQTTAYIQIN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCCCCEEEEEEEE
YVGDPAEFAWILPVPSNPKVDVIEASTFAELHTLTDPRVTFPSPPECFPAIVGAAPDGAG
EECCCCCEEEEEECCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC
QAPNVLQQGQVGPYDYSVIEDRDPAALETWLKTNGYQTPAGLEAALKPYTEAGMPLIAMK
CCCCHHHCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCHHHHHCCHHHCCCCEEEEE
LKPGADTNDIQPVAISFTGTTPMLPLRLAALSSEPKTPITVWIFGEAQAIPTNTERFTMR
ECCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEEECCEECCCCCCEEEEE
ENDLALTAYDGSNNYKELRSGVLASVAGKGFLTEYAQQSKFLNPQDSLLKELTSKYAFLT
CCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RLYAEISPEEMLFDPTFGYSPDLPPLSNNIDLTYRAEPYDCETATLHTVRRQQYDAAKGN
HHHHHCCHHHEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
RSSEEEATANLRRGPLRIGTLLVIGVTMGSIWLLARRPKRRPSA
CCCHHHHHHHHHCCCEEHHHHEEEHHHHHHEEEEECCCCCCCCC
>Mature Secondary Structure
MRRFATVFALCSILSFTLPSIAAACGALIPADDQIRQAGLNVIFAVDGQANQTTAYIQIN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCCCCEEEEEEEE
YVGDPAEFAWILPVPSNPKVDVIEASTFAELHTLTDPRVTFPSPPECFPAIVGAAPDGAG
EECCCCCEEEEEECCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCC
QAPNVLQQGQVGPYDYSVIEDRDPAALETWLKTNGYQTPAGLEAALKPYTEAGMPLIAMK
CCCCHHHCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCHHHHHCCHHHCCCCEEEEE
LKPGADTNDIQPVAISFTGTTPMLPLRLAALSSEPKTPITVWIFGEAQAIPTNTERFTMR
ECCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEEECCEECCCCCCEEEEE
ENDLALTAYDGSNNYKELRSGVLASVAGKGFLTEYAQQSKFLNPQDSLLKELTSKYAFLT
CCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RLYAEISPEEMLFDPTFGYSPDLPPLSNNIDLTYRAEPYDCETATLHTVRRQQYDAAKGN
HHHHHCCHHHEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
RSSEEEATANLRRGPLRIGTLLVIGVTMGSIWLLARRPKRRPSA
CCCHHHHHHHHHCCCEEHHHHEEEHHHHHHEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA