| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897350
Identifier: 159897350
GI number: 159897350
Start: 929042
End: 930097
Strand: Reverse
Name: 159897350
Synonym: Haur_0821
Alternate gene names: NA
Gene position: 930097-929042 (Counterclockwise)
Preceding gene: 159897351
Following gene: 159897349
Centisome position: 14.66
GC content: 53.12
Gene sequence:
>1056_bases ATGAGTATCACGATCTATCCGATTCCGCGTTTACTGGCAACCAACCCATATCTTGATTTGTTGTATGCGCCATTTGCCGC CTGGCCTGATGTGCAGATTGCACGTCAGCCGTTTGCCCAAACCTTGCGTCATGGCTTGTTGCATGGCGGTCAGCGGGTGT TGCATTGGCATTTTTTCGATGAACTAACCCAGCAGCCTAACCAAGCGGCAACGGCATTGCGCAGCATAAGCTTTATTGCG CTATTGCGTTTGCTGGCTTTGCGTGAGGCAAAATTGGTTTGGACGGCTCACAACTTGGAGCCGCATGAATTGCGTTACCC TCAATGGGCGCAGCGTTGTTATCAGGCGATGGCGCAGGCGGCTGGGCAAATTATTGTACATTCGCAGCCCGCTGCCCAAC TGCTCGATCAACGTTATCAGGTTGCTACAAAAACCCAAGTAATTGCCCATGGCTCGTATATTGGTGTCTATGGCGAAGCT TGGGAGCAAGCGGCAGCCCGTAAGCATTTGCAACTAACGCCCGAAGGCTTTGTTGCGCTCAATCTTGGCACATTGCGACC CTACAAAGGTGTGGAATTGTTGCTTGAAGCGTGGTCAGCCGAGCTTGGCCGTTTGCTGATCGTGGGCGCGGCCAAAGATC AACGCTATGCTGAGCAATTGCAACAACAGGCAACCAACCCCAGCATCACGCTACGGCCCCAGTTTATTGCCGATTCTCTC TTGCCTGCTTGGTTTGCCGCCGCCGATGTGGTAGTGTTGCCCTATCGCAAAACCTTGACCTCAGGCATGTTGCTGGCAGC ACTTTCGTATGCAGCACCTGTCGTTGCGCCTGATTTGCCGCCAGTCCGCGAATTGATTCGCGATGGAGAGAATGGCTTTT TGTTTGAGGTCAATAATGCGGCTAGTCTAAGGGCCGCGTTGCAACGAGCCGCTGCTCATCCCGACCGACAAGCTTTGCGC CAAAATGCGCTCCAAACAGTTCAAGCGCTTGATTGGGGCCAGATTGCCAACCAAACAGCGGCAGTCTATCGCCGTTTATT TGAGAAACCCGCATGA
Upstream 100 bases:
>100_bases ATTTCACGACTGGCGGCGGAACCAACAGCTATCGTGGAATTCCCACACCATAGCATTATTTTGCAGGGCGTTGGTCGCGT TTGGCGGCCAACGCAAAATT
Downstream 100 bases:
>100_bases TTCCAGGCCAAATTTCGATTATCATCGTGAGCTATAACAGCGCCGCCCTATTGCCCGCTTGTTTTGCCAGCCTCGCCATG ACCAACGACGACAATTATCA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase Gt4J; Group 1 Glycosyl Transferase; Lipopolysaccharide Transferase Family Protein; GumI Protein; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSITIYPIPRLLATNPYLDLLYAPFAAWPDVQIARQPFAQTLRHGLLHGGQRVLHWHFFDELTQQPNQAATALRSISFIA LLRLLALREAKLVWTAHNLEPHELRYPQWAQRCYQAMAQAAGQIIVHSQPAAQLLDQRYQVATKTQVIAHGSYIGVYGEA WEQAAARKHLQLTPEGFVALNLGTLRPYKGVELLLEAWSAELGRLLIVGAAKDQRYAEQLQQQATNPSITLRPQFIADSL LPAWFAAADVVVLPYRKTLTSGMLLAALSYAAPVVAPDLPPVRELIRDGENGFLFEVNNAASLRAALQRAAAHPDRQALR QNALQTVQALDWGQIANQTAAVYRRLFEKPA
Sequences:
>Translated_351_residues MSITIYPIPRLLATNPYLDLLYAPFAAWPDVQIARQPFAQTLRHGLLHGGQRVLHWHFFDELTQQPNQAATALRSISFIA LLRLLALREAKLVWTAHNLEPHELRYPQWAQRCYQAMAQAAGQIIVHSQPAAQLLDQRYQVATKTQVIAHGSYIGVYGEA WEQAAARKHLQLTPEGFVALNLGTLRPYKGVELLLEAWSAELGRLLIVGAAKDQRYAEQLQQQATNPSITLRPQFIADSL LPAWFAAADVVVLPYRKTLTSGMLLAALSYAAPVVAPDLPPVRELIRDGENGFLFEVNNAASLRAALQRAAAHPDRQALR QNALQTVQALDWGQIANQTAAVYRRLFEKPA >Mature_350_residues SITIYPIPRLLATNPYLDLLYAPFAAWPDVQIARQPFAQTLRHGLLHGGQRVLHWHFFDELTQQPNQAATALRSISFIAL LRLLALREAKLVWTAHNLEPHELRYPQWAQRCYQAMAQAAGQIIVHSQPAAQLLDQRYQVATKTQVIAHGSYIGVYGEAW EQAAARKHLQLTPEGFVALNLGTLRPYKGVELLLEAWSAELGRLLIVGAAKDQRYAEQLQQQATNPSITLRPQFIADSLL PAWFAAADVVVLPYRKTLTSGMLLAALSYAAPVVAPDLPPVRELIRDGENGFLFEVNNAASLRAALQRAAAHPDRQALRQ NALQTVQALDWGQIANQTAAVYRRLFEKPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39121; Mature: 38990
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITIYPIPRLLATNPYLDLLYAPFAAWPDVQIARQPFAQTLRHGLLHGGQRVLHWHFFD CEEEEEECHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ELTQQPNQAATALRSISFIALLRLLALREAKLVWTAHNLEPHELRYPQWAQRCYQAMAQA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHCCCHHHHHHHHHHHHHH AGQIIVHSQPAAQLLDQRYQVATKTQVIAHGSYIGVYGEAWEQAAARKHLQLTPEGFVAL CCEEEEECCHHHHHHHHHHHHHHHHHHEECCCEEECCHHHHHHHHHHHCCEECCCCEEEE NLGTLRPYKGVELLLEAWSAELGRLLIVGAAKDQRYAEQLQQQATNPSITLRPQFIADSL EECCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCEEECHHHHHHHH LPAWFAAADVVVLPYRKTLTSGMLLAALSYAAPVVAPDLPPVRELIRDGENGFLFEVNNA HHHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEECCH ASLRAALQRAAAHPDRQALRQNALQTVQALDWGQIANQTAAVYRRLFEKPA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SITIYPIPRLLATNPYLDLLYAPFAAWPDVQIARQPFAQTLRHGLLHGGQRVLHWHFFD EEEEEECHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ELTQQPNQAATALRSISFIALLRLLALREAKLVWTAHNLEPHELRYPQWAQRCYQAMAQA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHCCCHHHHHHHHHHHHHH AGQIIVHSQPAAQLLDQRYQVATKTQVIAHGSYIGVYGEAWEQAAARKHLQLTPEGFVAL CCEEEEECCHHHHHHHHHHHHHHHHHHEECCCEEECCHHHHHHHHHHHCCEECCCCEEEE NLGTLRPYKGVELLLEAWSAELGRLLIVGAAKDQRYAEQLQQQATNPSITLRPQFIADSL EECCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCEEECHHHHHHHH LPAWFAAADVVVLPYRKTLTSGMLLAALSYAAPVVAPDLPPVRELIRDGENGFLFEVNNA HHHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEECCH ASLRAALQRAAAHPDRQALRQNALQTVQALDWGQIANQTAAVYRRLFEKPA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA