Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897302
Identifier: 159897302
GI number: 159897302
Start: 873880
End: 875247
Strand: Reverse
Name: 159897302
Synonym: Haur_0773
Alternate gene names: NA
Gene position: 875247-873880 (Counterclockwise)
Preceding gene: 159897304
Following gene: 159897298
Centisome position: 13.79
GC content: 52.49
Gene sequence:
>1368_bases ATGAATCCTCAAACTGCAAAACAATCGTCACACTATATCACGCAGCCAGCCAACCAATGGATGGATCGGGCAATTCCTTG GCTAATCGTTGGGTGTTTATTACCACTCTATTGCTTGATGAGCAGCCCAACCATTAGTACAGCCTATGGCAGCAGCGATA GTGGCGAGTTGGCGACGGCACTCTGGTTTGGCGCAGTGCCGCATCCGCCAGGTATGCCCACTTATTTGCTGTTTGGGCAA ATTGCGCTCAACTGGTTTGGCGGCGAGCCAGCTCAGCGTTTAGCGTGGCTGAGCGCCATCGCTACGGCCTTGAGTGCTGG CGTGGTCGCTGCGAGCGTTGGATTAAGCGCCAGCGAGCAACCAGCCAAAATCCGTTGGAGCGCCATGTTGGCTGCTGGAT TAGGCGTTGGGCTAAGTCAACGAATTTGGCAACAAGCGCTGGTAGTCGAAGTTTATGCCTTGGCAAATTTGTTTCAAGCT TTATTGCTCTGGCTCAGTTTGCGCTGGCAACGTTGGCAACAAACCAGCACATTGGCGGCGCTCGGCTTGGTTTTAGGCTT GGGTTTGAGCGTGCAACTGCCAGTTGCCGCATGGCTGGTTGGCTTCGGCTGGTTTTGGTTCAAAGCCAAATGGTCGATTA GCTGGCGGCAAATTGGGCTATGTTGGCTGATGGTTGGGCTTGGTCTCGGTTGTTATTTGGTGTTGCCATGGCGTGGCGCG GCGGTTCCTCAAGCAAGTTGGGGCGATTGGCGCAGCGTTGAGGGGGCAATTGCCCATATCAGCGCCAGCGAATATCGTTA TTTAGTTGGAGCCGTACCACTGAGCGAGCAAATTCAACGGCTTGTTTTGGCATTCCGCGATTTGCTAGCCAGCTATTGGT GGATTGTCGGGCCATTGCTAATCGGCTTTGGCTGGACAAAAATCATGGTTGCTCAACGCTCGATGTTGATTGGCTGGGCC GGAGTTACGTTGCTTTGGGCCATCAGTTATGGCGGCGCTGATGCCCAAGTCTATCTCTTGCCAATCCATTTGTTGGCTGG TTGGTTGCTGGGCATGGGCGTTGTGGGGTTGGCACACTATAAATCCATAGAACGTTGGATGTGGCTAGCGCCAGTGTTGA GTTTGATCGCATTACCCTTCGGTTGGCAATTTTCGCTACACAATCAAACCCAAAGCCGCGATCAAGCGATCGCCTTATTG CAACAACAACCGCCCAATGGTCAATTGCTCAGCAACGACGATCAAACAACATTTAGTGCATGGTATGTGCAAAAGGTCTT GGGGGTACGGCCAGATCTAGAGATTATTGATCAGCGGTTACAACAACAGCTGTGGTATCGGCAACGGGAAGGGTTACCAC TTCGCTAG
Upstream 100 bases:
>100_bases CAATCTTGGGAATCTTGTTGAGCAACAAGGCATCACGCACCAATAAAATCAATGAGGCTAGCCCTAAAAGCAGCCCAATC ACAACAGGAAGCATAGATCG
Downstream 100 bases:
>100_bases GATCTTTGATGATATCGACGACCACCAAAGTCAAGTCATCAGCTTGGCGGGCGGCTCCCCGAAACTCATCAACCGCCGCA CAGTAGGCATCGATCAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MNPQTAKQSSHYITQPANQWMDRAIPWLIVGCLLPLYCLMSSPTISTAYGSSDSGELATALWFGAVPHPPGMPTYLLFGQ IALNWFGGEPAQRLAWLSAIATALSAGVVAASVGLSASEQPAKIRWSAMLAAGLGVGLSQRIWQQALVVEVYALANLFQA LLLWLSLRWQRWQQTSTLAALGLVLGLGLSVQLPVAAWLVGFGWFWFKAKWSISWRQIGLCWLMVGLGLGCYLVLPWRGA AVPQASWGDWRSVEGAIAHISASEYRYLVGAVPLSEQIQRLVLAFRDLLASYWWIVGPLLIGFGWTKIMVAQRSMLIGWA GVTLLWAISYGGADAQVYLLPIHLLAGWLLGMGVVGLAHYKSIERWMWLAPVLSLIALPFGWQFSLHNQTQSRDQAIALL QQQPPNGQLLSNDDQTTFSAWYVQKVLGVRPDLEIIDQRLQQQLWYRQREGLPLR
Sequences:
>Translated_455_residues MNPQTAKQSSHYITQPANQWMDRAIPWLIVGCLLPLYCLMSSPTISTAYGSSDSGELATALWFGAVPHPPGMPTYLLFGQ IALNWFGGEPAQRLAWLSAIATALSAGVVAASVGLSASEQPAKIRWSAMLAAGLGVGLSQRIWQQALVVEVYALANLFQA LLLWLSLRWQRWQQTSTLAALGLVLGLGLSVQLPVAAWLVGFGWFWFKAKWSISWRQIGLCWLMVGLGLGCYLVLPWRGA AVPQASWGDWRSVEGAIAHISASEYRYLVGAVPLSEQIQRLVLAFRDLLASYWWIVGPLLIGFGWTKIMVAQRSMLIGWA GVTLLWAISYGGADAQVYLLPIHLLAGWLLGMGVVGLAHYKSIERWMWLAPVLSLIALPFGWQFSLHNQTQSRDQAIALL QQQPPNGQLLSNDDQTTFSAWYVQKVLGVRPDLEIIDQRLQQQLWYRQREGLPLR >Mature_455_residues MNPQTAKQSSHYITQPANQWMDRAIPWLIVGCLLPLYCLMSSPTISTAYGSSDSGELATALWFGAVPHPPGMPTYLLFGQ IALNWFGGEPAQRLAWLSAIATALSAGVVAASVGLSASEQPAKIRWSAMLAAGLGVGLSQRIWQQALVVEVYALANLFQA LLLWLSLRWQRWQQTSTLAALGLVLGLGLSVQLPVAAWLVGFGWFWFKAKWSISWRQIGLCWLMVGLGLGCYLVLPWRGA AVPQASWGDWRSVEGAIAHISASEYRYLVGAVPLSEQIQRLVLAFRDLLASYWWIVGPLLIGFGWTKIMVAQRSMLIGWA GVTLLWAISYGGADAQVYLLPIHLLAGWLLGMGVVGLAHYKSIERWMWLAPVLSLIALPFGWQFSLHNQTQSRDQAIALL QQQPPNGQLLSNDDQTTFSAWYVQKVLGVRPDLEIIDQRLQQQLWYRQREGLPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93277080, Length=444, Percent_Identity=25.2252252252252, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50489; Mature: 50489
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPQTAKQSSHYITQPANQWMDRAIPWLIVGCLLPLYCLMSSPTISTAYGSSDSGELATA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHH LWFGAVPHPPGMPTYLLFGQIALNWFGGEPAQRLAWLSAIATALSAGVVAASVGLSASEQ HHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PAKIRWSAMLAAGLGVGLSQRIWQQALVVEVYALANLFQALLLWLSLRWQRWQQTSTLAA CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLVLGLGLSVQLPVAAWLVGFGWFWFKAKWSISWRQIGLCWLMVGLGLGCYLVLPWRGA HHHHHHCCCCEEHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCC AVPQASWGDWRSVEGAIAHISASEYRYLVGAVPLSEQIQRLVLAFRDLLASYWWIVGPLL CCCCCCCCCCHHHCHHHHEECHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IGFGWTKIMVAQRSMLIGWAGVTLLWAISYGGADAQVYLLPIHLLAGWLLGMGVVGLAHY HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH KSIERWMWLAPVLSLIALPFGWQFSLHNQTQSRDQAIALLQQQPPNGQLLSNDDQTTFSA HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEECCCCCHHHHH WYVQKVLGVRPDLEIIDQRLQQQLWYRQREGLPLR HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNPQTAKQSSHYITQPANQWMDRAIPWLIVGCLLPLYCLMSSPTISTAYGSSDSGELATA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHH LWFGAVPHPPGMPTYLLFGQIALNWFGGEPAQRLAWLSAIATALSAGVVAASVGLSASEQ HHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PAKIRWSAMLAAGLGVGLSQRIWQQALVVEVYALANLFQALLLWLSLRWQRWQQTSTLAA CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLVLGLGLSVQLPVAAWLVGFGWFWFKAKWSISWRQIGLCWLMVGLGLGCYLVLPWRGA HHHHHHCCCCEEHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCC AVPQASWGDWRSVEGAIAHISASEYRYLVGAVPLSEQIQRLVLAFRDLLASYWWIVGPLL CCCCCCCCCCHHHCHHHHEECHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IGFGWTKIMVAQRSMLIGWAGVTLLWAISYGGADAQVYLLPIHLLAGWLLGMGVVGLAHY HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH KSIERWMWLAPVLSLIALPFGWQFSLHNQTQSRDQAIALLQQQPPNGQLLSNDDQTTFSA HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEECCCCCHHHHH WYVQKVLGVRPDLEIIDQRLQQQLWYRQREGLPLR HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA