Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897297
Identifier: 159897297
GI number: 159897297
Start: 869184
End: 870107
Strand: Direct
Name: 159897297
Synonym: Haur_0768
Alternate gene names: NA
Gene position: 869184-870107 (Clockwise)
Preceding gene: 159897288
Following gene: 159897299
Centisome position: 13.7
GC content: 50.87
Gene sequence:
>924_bases ATGATGCAAGTTCCGCTAACCCAACTAAGCGATCATATCGCCATGATCGATAATGGCCTGCTGACAACCGATGGTTTTGG GGCAACCTATGTGATACAAGGCGATCAGGTTGCCTTGATCGAAACTGGCACATCATTAACTGCTGAAGCAACTTTGGCTG GTTTGCAACAATTGGGGATTGCGCCCGAAGCCGTTGAACACATCCTCTTAACGCATGTGCATATGGATCACAGCGGCGGT GCGGGAATTTTGGCGCAACATTTGCCCAATGCCAAGGTTTATTTACATTCAATGACCGCCGAGCATTTGATAGAGCCAAG CCGTTTGATGCGTAGCGTCGAACGGGCGGTTGGTCAGATGTGGCATGTCTATGGCACGATGCTGCCGATTGCTGCCGAAC GCATGCTTGCCGCTGAGCATTTGAAGCTGAATCTTGGTAAGGGGATTGTCTTGCAGGCCGTGCCAACGCCTGGCCACTCG CCCGATCATCTGGCATTTTGGGAAGCGCACTCAGGCACAATGTGGGCTGGCGATTCAATTGGCATTTTGATGAGCACGTT TAATCTGAATATGCCCGTTACTCCGCCACCAGCCTTCAATTTGGCTGATCAACTGCAAGCCTTCCAAACCTTGGCGCAGT ATCCAATTCGCCAATTGTTGCCTTCGCACTTTGGCCCAACTGTGGCAGCACCAGCCTTGGCAATTGAAGAAATGCACCAA CGCTTAGTCAAGATCGTGCGCGATGTGCGTGATCATCTGCATCTGACAGAATTGCCAGTTGAGGCGATTGTTGAACGAGC GCTACCAACCAACGAGCCAGTTTCGCCAGCGCTGAATTTGGTGTTGTGGGGCAATTTGTCGATGAGCGTGCGTGGCTTGA AACTATTTTTCGAACGTAACCCGCAGGCTGTCGAATTAATTTAA
Upstream 100 bases:
>100_bases TCTATGCCTAACAATTAAATATTGCTAAATAGCTAGGTCTGCGATTTGCTGAATCAGGTAGAATAGCTGTGCGTTGATTT TGTAACCTATTCGGAGTGCA
Downstream 100 bases:
>100_bases ATGTTGAAACGCAGGATCAGCCTGATCCTGCGTTTTTAATTAATCGTTCAAGCTCAAAATCGTATTCGAAATTTGCTCGC CCAAATCGCGGCGGCGTTGC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MMQVPLTQLSDHIAMIDNGLLTTDGFGATYVIQGDQVALIETGTSLTAEATLAGLQQLGIAPEAVEHILLTHVHMDHSGG AGILAQHLPNAKVYLHSMTAEHLIEPSRLMRSVERAVGQMWHVYGTMLPIAAERMLAAEHLKLNLGKGIVLQAVPTPGHS PDHLAFWEAHSGTMWAGDSIGILMSTFNLNMPVTPPPAFNLADQLQAFQTLAQYPIRQLLPSHFGPTVAAPALAIEEMHQ RLVKIVRDVRDHLHLTELPVEAIVERALPTNEPVSPALNLVLWGNLSMSVRGLKLFFERNPQAVELI
Sequences:
>Translated_307_residues MMQVPLTQLSDHIAMIDNGLLTTDGFGATYVIQGDQVALIETGTSLTAEATLAGLQQLGIAPEAVEHILLTHVHMDHSGG AGILAQHLPNAKVYLHSMTAEHLIEPSRLMRSVERAVGQMWHVYGTMLPIAAERMLAAEHLKLNLGKGIVLQAVPTPGHS PDHLAFWEAHSGTMWAGDSIGILMSTFNLNMPVTPPPAFNLADQLQAFQTLAQYPIRQLLPSHFGPTVAAPALAIEEMHQ RLVKIVRDVRDHLHLTELPVEAIVERALPTNEPVSPALNLVLWGNLSMSVRGLKLFFERNPQAVELI >Mature_307_residues MMQVPLTQLSDHIAMIDNGLLTTDGFGATYVIQGDQVALIETGTSLTAEATLAGLQQLGIAPEAVEHILLTHVHMDHSGG AGILAQHLPNAKVYLHSMTAEHLIEPSRLMRSVERAVGQMWHVYGTMLPIAAERMLAAEHLKLNLGKGIVLQAVPTPGHS PDHLAFWEAHSGTMWAGDSIGILMSTFNLNMPVTPPPAFNLADQLQAFQTLAQYPIRQLLPSHFGPTVAAPALAIEEMHQ RLVKIVRDVRDHLHLTELPVEAIVERALPTNEPVSPALNLVLWGNLSMSVRGLKLFFERNPQAVELI
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 33480; Mature: 33480
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQVPLTQLSDHIAMIDNGLLTTDGFGATYVIQGDQVALIETGTSLTAEATLAGLQQLGI CCCCCHHHHHHHHHHHCCCEEEECCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHCC APEAVEHILLTHVHMDHSGGAGILAQHLPNAKVYLHSMTAEHLIEPSRLMRSVERAVGQM CHHHHHHHHHHHEEECCCCCCCHHHHHCCCCEEEEEECCHHHHCCHHHHHHHHHHHHHHH WHVYGTMLPIAAERMLAAEHLKLNLGKGIVLQAVPTPGHSPDHLAFWEAHSGTMWAGDSI HHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCEEEEECCCCCEECCCCC GILMSTFNLNMPVTPPPAFNLADQLQAFQTLAQYPIRQLLPSHFGPTVAAPALAIEEMHQ EEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RLVKIVRDVRDHLHLTELPVEAIVERALPTNEPVSPALNLVLWGNLSMSVRGLKLFFERN HHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEHEEEEEECC PQAVELI CCEEECC >Mature Secondary Structure MMQVPLTQLSDHIAMIDNGLLTTDGFGATYVIQGDQVALIETGTSLTAEATLAGLQQLGI CCCCCHHHHHHHHHHHCCCEEEECCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHCC APEAVEHILLTHVHMDHSGGAGILAQHLPNAKVYLHSMTAEHLIEPSRLMRSVERAVGQM CHHHHHHHHHHHEEECCCCCCCHHHHHCCCCEEEEEECCHHHHCCHHHHHHHHHHHHHHH WHVYGTMLPIAAERMLAAEHLKLNLGKGIVLQAVPTPGHSPDHLAFWEAHSGTMWAGDSI HHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCEEEEECCCCCEECCCCC GILMSTFNLNMPVTPPPAFNLADQLQAFQTLAQYPIRQLLPSHFGPTVAAPALAIEEMHQ EEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RLVKIVRDVRDHLHLTELPVEAIVERALPTNEPVSPALNLVLWGNLSMSVRGLKLFFERN HHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEHEEEEEECC PQAVELI CCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2153661; 10984043 [H]