Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is tatB [C]
Identifier: 159897282
GI number: 159897282
Start: 856572
End: 857042
Strand: Direct
Name: tatB [C]
Synonym: Haur_0753
Alternate gene names: 159897282
Gene position: 856572-857042 (Clockwise)
Preceding gene: 159897281
Following gene: 159897283
Centisome position: 13.5
GC content: 54.35
Gene sequence:
>471_bases ATGACAATTTTTGGGATTGGCCCGTTTGAATTTGTAATCATCTTGGTGATTGCCCTGGTGGTGGTCGGCCCTGAGCGCTT GCCTGAAATGTTGTTTCAGATTGGCCAGTGGATCAGCAAAGGCCGTAAGATGATCAGCGATCTGCGCAATCAGGCTCGTA ACGAGCTGGGCGATGATTATGAATCGGTCGAAAAAATGGCCCGCCAAATTCGCGAACTCGACCCGCGCCGCCAAATTCAA GAGCTTGGGCGCTCGATTCTCTCCGATGATGATCGGGCGATGATTGTCGATCTTGGCTTAGATCCCAAAACGACGGCTGC GGCCAATGTGATCGACCCAACCCCCAAACCCCCAGCAGCACGGCCTGAGATTGCCCGCCAAGCGCGAATGATGCTCGATG ACGATTTGCTAGATCAGCCGCTAGACCAAGCATTGCGTGCGCCAGCCGCCGAGGAGCAAACCAATGGCTAA
Upstream 100 bases:
>100_bases TGAGGGGACGCAACGATAAACCATTGCAGTTATTTGTTGGGCTTTTGGTTAACACTGCTTAAAGCGTTGCCCCAAGCCTG TAGCCAGTGGTCAGACGCTT
Downstream 100 bases:
>100_bases ATCAACAACCGCGATTGATGGCACCATGACCTTGCTCGACCACTTGCGCGAGTTGCGTTCACGGCTCACCAAGGTCTCGA TTGCCGTATTAATTGGCATG
Product: twin-arginine translocation protein subunit TatB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTIFGIGPFEFVIILVIALVVVGPERLPEMLFQIGQWISKGRKMISDLRNQARNELGDDYESVEKMARQIRELDPRRQIQ ELGRSILSDDDRAMIVDLGLDPKTTAAANVIDPTPKPPAARPEIARQARMMLDDDLLDQPLDQALRAPAAEEQTNG
Sequences:
>Translated_156_residues MTIFGIGPFEFVIILVIALVVVGPERLPEMLFQIGQWISKGRKMISDLRNQARNELGDDYESVEKMARQIRELDPRRQIQ ELGRSILSDDDRAMIVDLGLDPKTTAAANVIDPTPKPPAARPEIARQARMMLDDDLLDQPLDQALRAPAAEEQTNG >Mature_155_residues TIFGIGPFEFVIILVIALVVVGPERLPEMLFQIGQWISKGRKMISDLRNQARNELGDDYESVEKMARQIRELDPRRQIQE LGRSILSDDDRAMIVDLGLDPKTTAAANVIDPTPKPPAARPEIARQARMMLDDDLLDQPLDQALRAPAAEEQTNG
Specific function: Required For Correct Localization Of Precursor Proteins Bearing Signal Peptides With The Twin Arginine Conserved Motif S/T-R-R-X-F-L-K. This Sec-Independent Pathway Is Termed Tat For Twin-Arginine Translocation System. This System Mainly Transports Protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Inner-membrane bound [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17460; Mature: 17329
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIFGIGPFEFVIILVIALVVVGPERLPEMLFQIGQWISKGRKMISDLRNQARNELGDDY CCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ESVEKMARQIRELDPRRQIQELGRSILSDDDRAMIVDLGLDPKTTAAANVIDPTPKPPAA HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCC RPEIARQARMMLDDDLLDQPLDQALRAPAAEEQTNG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TIFGIGPFEFVIILVIALVVVGPERLPEMLFQIGQWISKGRKMISDLRNQARNELGDDY CCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ESVEKMARQIRELDPRRQIQELGRSILSDDDRAMIVDLGLDPKTTAAANVIDPTPKPPAA HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCC RPEIARQARMMLDDDLLDQPLDQALRAPAAEEQTNG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA