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The map label for this gene is nusB

Identifier: 159897280

GI number: 159897280

Start: 855430

End: 855870

Strand: Direct

Name: nusB

Synonym: Haur_0751

Alternate gene names: 159897280

Gene position: 855430-855870 (Clockwise)

Preceding gene: 159897279

Following gene: 159897281

Centisome position: 13.48

GC content: 49.21

Gene sequence:

>441_bases
ATGTCGAGCAGAACCGTGGGTAGCCTTCGCCACCGAGTGCGTGCTGCGGCACTTCAGGCACTCTTTGAACTTGATCAAAC
CACCCACGACCTTGATTCGGTTGTTGCACGCATCAGTGATGATGAAATGTTCAGCGCAGAAGGTCGTGATTTTTTTGCCC
GAATTGTCAATGGTGCATGGGTTAATCGTCAAGAGATTGATGATTTAATTGCCAAAATTGCCCCATCTTGGCCTGTCCAC
CAAATGCCTGGGGTGGATATTGCGGTGCTGCGCATCGCTTTGTTTGAAATTCTCTACGATGCGGCGGCGGATAAAGCTCC
GGTTAAAGCCGTGATTAATGAAGCGGTCGAGCTTGCAAAACATTTCGGCAGCGATAATTCGGGCCGTTTTGTCAATGGTG
TGCTCAGTACCGTGGTCAATAAACCTGAATCCGAGGAATAA

Upstream 100 bases:

>100_bases
AACTTGCTTGATCTCGGCGCTCGTGTTCAATCGGCGGTAACCGAAGCATTAAACGAAATGGTCGGCATGCCGGTCAGTGC
GGTTAATGTCTATATTCAGG

Downstream 100 bases:

>100_bases
CTCGGTAATCCCTTTGATTGCCTCGGACTTATCCTTATCTATACGGAGAATCCAACAATGTCAGACTTAAACGAACGCTT
GAAGAAATTGGTTGCTGAAC

Product: NusB antitermination factor

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSSRTVGSLRHRVRAAALQALFELDQTTHDLDSVVARISDDEMFSAEGRDFFARIVNGAWVNRQEIDDLIAKIAPSWPVH
QMPGVDIAVLRIALFEILYDAAADKAPVKAVINEAVELAKHFGSDNSGRFVNGVLSTVVNKPESEE

Sequences:

>Translated_146_residues
MSSRTVGSLRHRVRAAALQALFELDQTTHDLDSVVARISDDEMFSAEGRDFFARIVNGAWVNRQEIDDLIAKIAPSWPVH
QMPGVDIAVLRIALFEILYDAAADKAPVKAVINEAVELAKHFGSDNSGRFVNGVLSTVVNKPESEE
>Mature_145_residues
SSRTVGSLRHRVRAAALQALFELDQTTHDLDSVVARISDDEMFSAEGRDFFARIVNGAWVNRQEIDDLIAKIAPSWPVHQ
MPGVDIAVLRIALFEILYDAAADKAPVKAVINEAVELAKHFGSDNSGRFVNGVLSTVVNKPESEE

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

Organism=Escherichia coli, GI1786618, Length=120, Percent_Identity=34.1666666666667, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_HERA2 (A9AXI5)

Other databases:

- EMBL:   CP000875
- RefSeq:   YP_001543527.1
- ProteinModelPortal:   A9AXI5
- SMR:   A9AXI5
- GeneID:   5732474
- GenomeReviews:   CP000875_GR
- KEGG:   hau:Haur_0751
- HOGENOM:   HBG734409
- OMA:   DINQSAM
- ProtClustDB:   CLSK973269
- BioCyc:   HAUR316274:HAUR_0751-MONOMER
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 16045; Mature: 15914

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRTVGSLRHRVRAAALQALFELDQTTHDLDSVVARISDDEMFSAEGRDFFARIVNGAW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCC
VNRQEIDDLIAKIAPSWPVHQMPGVDIAVLRIALFEILYDAAADKAPVKAVINEAVELAK
CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
HFGSDNSGRFVNGVLSTVVNKPESEE
HHCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSRTVGSLRHRVRAAALQALFELDQTTHDLDSVVARISDDEMFSAEGRDFFARIVNGAW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCC
VNRQEIDDLIAKIAPSWPVHQMPGVDIAVLRIALFEILYDAAADKAPVKAVINEAVELAK
CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
HFGSDNSGRFVNGVLSTVVNKPESEE
HHCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA