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The map label for this gene is ylbH [H]

Identifier: 159897268

GI number: 159897268

Start: 846423

End: 846998

Strand: Direct

Name: ylbH [H]

Synonym: Haur_0739

Alternate gene names: 159897268

Gene position: 846423-846998 (Clockwise)

Preceding gene: 159897267

Following gene: 159897269

Centisome position: 13.34

GC content: 49.65

Gene sequence:

>576_bases
ATGCGGGTGATTACTGGCAGTGCCAAAGGGCGACAATTAAAAGGCCCGCCAGATATTGGCACGCGCCCGATGCTTGATCG
GGTCAAAGAATCGTTATTTGGCATTTTAGAGGGCTTTAATGCTTTTGAAGGCCGTGCCCTCGATTTATTTGCGGGCACTG
GCTCGTTGGGGATCGAATGCTTATCGCGCGGCGCTGAATGGGCCGATTTTGTTGAGGCGCGTAGCCATGTTGCTGCTGTG
ACCAAAGACAACCTAAAAACCACCAAATTGGCTGAGCGAGCCAAAGTTTGGAACGTTTCGGTCGATAAATTTCTGCAAAT
CATCGACGAAAAAACAAAATATGCTATAATCCTGCTCGATCCGCCATATGCTATGGAAGGTATACCCGACCTTGTGGTGC
GGGTTGCTGAACACGGCATTTTAGATCCAAATGGCGTTTTAGTTTTAGGCCATTGGCCAAAGCTGGTGATGCCGCCCCAA
CTTGGGCCACTGAGTTTGCTAAAGCATCGGCGTATCGGCGATTCCTGCTTCTCAATTTATGAATTGAGCCCAGCGTTACC
GCCGCAATCGGAGTAA

Upstream 100 bases:

>100_bases
TCCCGCCGCCGTGGGAGAGGGGTTGGGGTGAGGGCTTATAAACCTGACTGTTTTGACTTTTGCCCTTTGACTTTTGCCTT
TATTTACGGGGTTACTACCA

Downstream 100 bases:

>100_bases
TCACCTGTGACTATTGCTGTCTACCCTGCAAGCTTCGACCCAATTACCAATGGACATCTTGATGTTGCGGCTCGCGCATC
ACGTTTGTTCGATGAATTGG

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MRVITGSAKGRQLKGPPDIGTRPMLDRVKESLFGILEGFNAFEGRALDLFAGTGSLGIECLSRGAEWADFVEARSHVAAV
TKDNLKTTKLAERAKVWNVSVDKFLQIIDEKTKYAIILLDPPYAMEGIPDLVVRVAEHGILDPNGVLVLGHWPKLVMPPQ
LGPLSLLKHRRIGDSCFSIYELSPALPPQSE

Sequences:

>Translated_191_residues
MRVITGSAKGRQLKGPPDIGTRPMLDRVKESLFGILEGFNAFEGRALDLFAGTGSLGIECLSRGAEWADFVEARSHVAAV
TKDNLKTTKLAERAKVWNVSVDKFLQIIDEKTKYAIILLDPPYAMEGIPDLVVRVAEHGILDPNGVLVLGHWPKLVMPPQ
LGPLSLLKHRRIGDSCFSIYELSPALPPQSE
>Mature_191_residues
MRVITGSAKGRQLKGPPDIGTRPMLDRVKESLFGILEGFNAFEGRALDLFAGTGSLGIECLSRGAEWADFVEARSHVAAV
TKDNLKTTKLAERAKVWNVSVDKFLQIIDEKTKYAIILLDPPYAMEGIPDLVVRVAEHGILDPNGVLVLGHWPKLVMPPQ
LGPLSLLKHRRIGDSCFSIYELSPALPPQSE

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=181, Percent_Identity=30.3867403314917, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 20940; Mature: 20940

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVITGSAKGRQLKGPPDIGTRPMLDRVKESLFGILEGFNAFEGRALDLFAGTGSLGIEC
CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHH
LSRGAEWADFVEARSHVAAVTKDNLKTTKLAERAKVWNVSVDKFLQIIDEKTKYAIILLD
HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEC
PPYAMEGIPDLVVRVAEHGILDPNGVLVLGHWPKLVMPPQLGPLSLLKHRRIGDSCFSIY
CCHHHHCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHH
ELSPALPPQSE
HCCCCCCCCCC
>Mature Secondary Structure
MRVITGSAKGRQLKGPPDIGTRPMLDRVKESLFGILEGFNAFEGRALDLFAGTGSLGIEC
CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHH
LSRGAEWADFVEARSHVAAVTKDNLKTTKLAERAKVWNVSVDKFLQIIDEKTKYAIILLD
HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEC
PPYAMEGIPDLVVRVAEHGILDPNGVLVLGHWPKLVMPPQLGPLSLLKHRRIGDSCFSIY
CCHHHHCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHH
ELSPALPPQSE
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]