Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897261
Identifier: 159897261
GI number: 159897261
Start: 841826
End: 842191
Strand: Direct
Name: 159897261
Synonym: Haur_0732
Alternate gene names: NA
Gene position: 841826-842191 (Clockwise)
Preceding gene: 159897260
Following gene: 159897265
Centisome position: 13.26
GC content: 46.17
Gene sequence:
>366_bases ATGAGCGATGTACAAGCGGTAATTCGACGAGAAGAGTGGGATGATGTCGTGCTGTTGCATATTCTGACCAACAGCGTCGA TGCGGTCTCGGCAGCAACGATCGAGCATGCCTGTACCCAGATGAAACCAATCACTGTTTTAGATTTTGCCGATGTGGCGT TTATCAACTCAGCTGGCATTTCGGTGTTGCTGAAGTTTGTGGTTGCTGCTCGCAAGAATGGCTATAAAGTCTTTTGTTTA CACGTCAGCCCGCACCATCAAAAAATCTTTAAGATGGTCGAGATGACGCGCTTTATGCCAGTAATCGAAGAACAAGATTT GGCGGCCTATACCAACGCCCAACAATCATCAATCTCCAATTCTTAA
Upstream 100 bases:
>100_bases ATCTGTCATCAAAAATTCATGCGGCTTGGTTGCCAAAAATCGTCTGCTCAACTATGATCATAGCAGAGTTGGCCGCGTTG ACCAACCTAGGAGATCTATT
Downstream 100 bases:
>100_bases CGTCCTTCTTCGTTCTTGTTGCGCGATGAGCGCTGGGTTAAATAGCAAGCGCAGGCAATCATTACTGCCTGCGCTCTAGC GTTTAATCGCAATGATTAGG
Product: anti-sigma-factor antagonist
Products: NA
Alternate protein names: Sulfate Transporter/Antisigma-Factor Antagonist STAS
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSDVQAVIRREEWDDVVLLHILTNSVDAVSAATIEHACTQMKPITVLDFADVAFINSAGISVLLKFVVAARKNGYKVFCL HVSPHHQKIFKMVEMTRFMPVIEEQDLAAYTNAQQSSISNS
Sequences:
>Translated_121_residues MSDVQAVIRREEWDDVVLLHILTNSVDAVSAATIEHACTQMKPITVLDFADVAFINSAGISVLLKFVVAARKNGYKVFCL HVSPHHQKIFKMVEMTRFMPVIEEQDLAAYTNAQQSSISNS >Mature_120_residues SDVQAVIRREEWDDVVLLHILTNSVDAVSAATIEHACTQMKPITVLDFADVAFINSAGISVLLKFVVAARKNGYKVFCLH VSPHHQKIFKMVEMTRFMPVIEEQDLAAYTNAQQSSISNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13493; Mature: 13362
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVQAVIRREEWDDVVLLHILTNSVDAVSAATIEHACTQMKPITVLDFADVAFINSAGI CCHHHHHHHHCCCCCEEHEEHHHCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCH SVLLKFVVAARKNGYKVFCLHVSPHHQKIFKMVEMTRFMPVIEEQDLAAYTNAQQSSISN HHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHCCCC S C >Mature Secondary Structure SDVQAVIRREEWDDVVLLHILTNSVDAVSAATIEHACTQMKPITVLDFADVAFINSAGI CHHHHHHHHCCCCCEEHEEHHHCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCH SVLLKFVVAARKNGYKVFCLHVSPHHQKIFKMVEMTRFMPVIEEQDLAAYTNAQQSSISN HHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA