The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is cheW [H]

Identifier: 159897251

GI number: 159897251

Start: 830680

End: 831111

Strand: Direct

Name: cheW [H]

Synonym: Haur_0722

Alternate gene names: 159897251

Gene position: 830680-831111 (Clockwise)

Preceding gene: 159897250

Following gene: 159897252

Centisome position: 13.09

GC content: 50.23

Gene sequence:

>432_bases
GTGAGCCAAGTTGAGGATCAATTGGCGCAATTTGTGGTTTTTATCCTCGATCAAGAACGGTTTGCTTTGCCAGTTGAGCA
GGCGCGTGGCATCGAACGTTGGCGTAATCCAACTCGCATTCCAGGCACTGCGACGGCAATTATGGGTATTATCAATCAAC
GTGGGGTGCTGCTGACGGTGGTTGATATGCGGGTGGTTTTAGGCATGAAGCCAATTACCCCAACTCGGCGTAGTCGTTTT
TTGCTCGTTCACGAACAGATTGATTGTGCAATTGCGGTTGATCAGGTGATCGATATGTTGACCTTGGATGTGGGTTTGGC
CGAGCCAACTCCCCATCGTGGAACGGTCGCGAGCCGAGGTTTGCTGCCAACGCCATTTGGGTTTGCAACTTGGCTTGATC
TTAATGCTCTACTTGGGTCGATCAATGGTTAA

Upstream 100 bases:

>100_bases
ACGATTTGCTGCTTTAGAACGCGCCATTTGTGATGATTCAATGCTTGGTTGCTGCTCAATTGAGCCACACAACCATTATT
GAATCATGCGGGAGCCTATT

Downstream 100 bases:

>100_bases
TCCAGTCATTGTCAGCGATCTTTATCCAGTTAATGTTGGCGATCAAACGGTCTTGATTCGCCAAACCGCCTTGGTTGGTG
TGGATTATGTTGCCAATAGC

Product: CheW protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSQVEDQLAQFVVFILDQERFALPVEQARGIERWRNPTRIPGTATAIMGIINQRGVLLTVVDMRVVLGMKPITPTRRSRF
LLVHEQIDCAIAVDQVIDMLTLDVGLAEPTPHRGTVASRGLLPTPFGFATWLDLNALLGSING

Sequences:

>Translated_143_residues
MSQVEDQLAQFVVFILDQERFALPVEQARGIERWRNPTRIPGTATAIMGIINQRGVLLTVVDMRVVLGMKPITPTRRSRF
LLVHEQIDCAIAVDQVIDMLTLDVGLAEPTPHRGTVASRGLLPTPFGFATWLDLNALLGSING
>Mature_142_residues
SQVEDQLAQFVVFILDQERFALPVEQARGIERWRNPTRIPGTATAIMGIINQRGVLLTVVDMRVVLGMKPITPTRRSRFL
LVHEQIDCAIAVDQVIDMLTLDVGLAEPTPHRGTVASRGLLPTPFGFATWLDLNALLGSING

Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]

COG id: COG0835

COG function: function code NT; Chemotaxis signal transduction protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cheW-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002545 [H]

Pfam domain/function: PF01584 CheW [H]

EC number: NA

Molecular weight: Translated: 15787; Mature: 15656

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50851 CHEW

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVEDQLAQFVVFILDQERFALPVEQARGIERWRNPTRIPGTATAIMGIINQRGVLLTV
CCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEH
VDMRVVLGMKPITPTRRSRFLLVHEQIDCAIAVDQVIDMLTLDVGLAEPTPHRGTVASRG
HHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LLPTPFGFATWLDLNALLGSING
CCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQVEDQLAQFVVFILDQERFALPVEQARGIERWRNPTRIPGTATAIMGIINQRGVLLTV
CHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEH
VDMRVVLGMKPITPTRRSRFLLVHEQIDCAIAVDQVIDMLTLDVGLAEPTPHRGTVASRG
HHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LLPTPFGFATWLDLNALLGSING
CCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1601874; 9384377 [H]