Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897189
Identifier: 159897189
GI number: 159897189
Start: 756590
End: 757039
Strand: Direct
Name: 159897189
Synonym: Haur_0660
Alternate gene names: NA
Gene position: 756590-757039 (Clockwise)
Preceding gene: 159897188
Following gene: 159897190
Centisome position: 11.92
GC content: 59.56
Gene sequence:
>450_bases ATGACCATCACCTATCAGGCCATCATTGACCAGCTGCACCTACGTTTCGCCCTGCTGCCGAGCTTGGTCCGGCTGAATGC CAGTGGCCAGAATGTCGCGTTGCTAACCGAAGAACCCAAGACGATCAGCCAGTGCCCGACGCTCTACAGTTTGCTCGAGC ACGTCACCTATGCCCCCAGTACGCCTGTGGCGATCAGCGAGGTCGTGATTCTCTCGCGCCTCGTGGTGGCCGATGCTGGC AGCGATCGCTGTGAAGCGGCGGTGATGCCCTATGTCTTTGACCTGCCAGCCACGATCAACGGTTCCTCAGAAGGGCGACG CTTAGGCAACTGGATCGCCCTGCGACGAGGGATTGCGACGGTCGAACGGGCGGAAGCGGTGTGGGTCGCGATTGGTGGCA AGAACCTGTACCGAGCGCTCGATCTGTATACAAGGATTACCCTGCAATGA
Upstream 100 bases:
>100_bases ATCCGTTCATGCGGCGCGGCCTGACCGACGCGCGGCCCAGTCTGTCCTTGCTGCTGAAGCTGGCTGCTGCCGACTTAATG AGTGAGTTACGAGGTCGCCC
Downstream 100 bases:
>100_bases TCTATTTTACCTACGTGGCCACGCCTGATGACGGCTTTTTGCCGGGCATTCCGTTGGCCAACCTGACCGCAACCCACGGC GAACAGATGGCCGATTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTITYQAIIDQLHLRFALLPSLVRLNASGQNVALLTEEPKTISQCPTLYSLLEHVTYAPSTPVAISEVVILSRLVVADAG SDRCEAAVMPYVFDLPATINGSSEGRRLGNWIALRRGIATVERAEAVWVAIGGKNLYRALDLYTRITLQ
Sequences:
>Translated_149_residues MTITYQAIIDQLHLRFALLPSLVRLNASGQNVALLTEEPKTISQCPTLYSLLEHVTYAPSTPVAISEVVILSRLVVADAG SDRCEAAVMPYVFDLPATINGSSEGRRLGNWIALRRGIATVERAEAVWVAIGGKNLYRALDLYTRITLQ >Mature_148_residues TITYQAIIDQLHLRFALLPSLVRLNASGQNVALLTEEPKTISQCPTLYSLLEHVTYAPSTPVAISEVVILSRLVVADAGS DRCEAAVMPYVFDLPATINGSSEGRRLGNWIALRRGIATVERAEAVWVAIGGKNLYRALDLYTRITLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16325; Mature: 16194
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITYQAIIDQLHLRFALLPSLVRLNASGQNVALLTEEPKTISQCPTLYSLLEHVTYAPS CEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC TPVAISEVVILSRLVVADAGSDRCEAAVMPYVFDLPATINGSSEGRRLGNWIALRRGIAT CCHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEECCCEECCCCCCHHHHHHHHHHHHHHH VERAEAVWVAIGGKNLYRALDLYTRITLQ HHHCCEEEEEECCCHHHHHHHHHHHEECC >Mature Secondary Structure TITYQAIIDQLHLRFALLPSLVRLNASGQNVALLTEEPKTISQCPTLYSLLEHVTYAPS EEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC TPVAISEVVILSRLVVADAGSDRCEAAVMPYVFDLPATINGSSEGRRLGNWIALRRGIAT CCHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEECCCEECCCCCCHHHHHHHHHHHHHHH VERAEAVWVAIGGKNLYRALDLYTRITLQ HHHCCEEEEEECCCHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA