Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897154
Identifier: 159897154
GI number: 159897154
Start: 720923
End: 721573
Strand: Direct
Name: 159897154
Synonym: Haur_0625
Alternate gene names: NA
Gene position: 720923-721573 (Clockwise)
Preceding gene: 159897153
Following gene: 159897158
Centisome position: 11.36
GC content: 43.63
Gene sequence:
>651_bases ATGTACGAGGTTGCTCATGCACGCTCACAACGGCTGCACATTCCGATCGTTACATGGCTTTATTGGATTGGCGTGCATAT CCCAGCACTGGTATTGTATGCCCTAGTACTACCCTATTTTTACCAAGATCATCCTGATGGTGGCGAATTATTTGTTTTCG GCTTGCTGATTGTCATCATGCTAAGCGCTATTGGAAGCATGAGCTATGGTCAGGCTTGGATTTTAAAACGGACAATCGAT CCAAACTCGTTCAAACACTGGTTTAGGGCAACAATTGCAGCATATTGTGCAGTGAGTATTGCGAAATATATGCTGAGTAT CGATCATCTTCTCTTTTCGATGTTTCGTACTTCTAATACGAGCAACCCCTTCGTCCACTGGATAGAACCGCAATTAATCT CAGTTGCAATTACATGTTTGGTGATTAGCAGTGTTCAAGCCTGGATTTTACGCAAAGCTGGCTATCGCATGCTGCATTGG ATTCCAACGATGCTGCTTAGTTGGGTCGTCGTATCACTAACCATCGCCTCGTTTAATAGTTTGTACGCTGAAGCTTTCTC TGGATCAACGGTGCTCGTCATGGGTTGCGCTAGTCTACTGAATGGTTTAGGTTTGTTTTTGATTCAATCTAGAAACCCAA ACTCCCTTTAA
Upstream 100 bases:
>100_bases CGATCGTGTGACGATTCCGAATGTATTGATGCAAAAGCCGTTGGTAACAAACTAAGATCAAGAAAACTCACGCTCCAATC GTTTGAGAAAGAGGCTGACG
Downstream 100 bases:
>100_bases CGAGCCACAATCGCCTTGAGCAATAGTTGCAAGGCTGCTTGCAATTGTTCGGTCAAACGCTGGGGCATTGGCTCTAGCAG CCAGAGCACGGTCGAGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MYEVAHARSQRLHIPIVTWLYWIGVHIPALVLYALVLPYFYQDHPDGGELFVFGLLIVIMLSAIGSMSYGQAWILKRTID PNSFKHWFRATIAAYCAVSIAKYMLSIDHLLFSMFRTSNTSNPFVHWIEPQLISVAITCLVISSVQAWILRKAGYRMLHW IPTMLLSWVVVSLTIASFNSLYAEAFSGSTVLVMGCASLLNGLGLFLIQSRNPNSL
Sequences:
>Translated_216_residues MYEVAHARSQRLHIPIVTWLYWIGVHIPALVLYALVLPYFYQDHPDGGELFVFGLLIVIMLSAIGSMSYGQAWILKRTID PNSFKHWFRATIAAYCAVSIAKYMLSIDHLLFSMFRTSNTSNPFVHWIEPQLISVAITCLVISSVQAWILRKAGYRMLHW IPTMLLSWVVVSLTIASFNSLYAEAFSGSTVLVMGCASLLNGLGLFLIQSRNPNSL >Mature_216_residues MYEVAHARSQRLHIPIVTWLYWIGVHIPALVLYALVLPYFYQDHPDGGELFVFGLLIVIMLSAIGSMSYGQAWILKRTID PNSFKHWFRATIAAYCAVSIAKYMLSIDHLLFSMFRTSNTSNPFVHWIEPQLISVAITCLVISSVQAWILRKAGYRMLHW IPTMLLSWVVVSLTIASFNSLYAEAFSGSTVLVMGCASLLNGLGLFLIQSRNPNSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24358; Mature: 24358
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEVAHARSQRLHIPIVTWLYWIGVHIPALVLYALVLPYFYQDHPDGGELFVFGLLIVIM CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LSAIGSMSYGQAWILKRTIDPNSFKHWFRATIAAYCAVSIAKYMLSIDHLLFSMFRTSNT HHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SNPFVHWIEPQLISVAITCLVISSVQAWILRKAGYRMLHWIPTMLLSWVVVSLTIASFNS CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH LYAEAFSGSTVLVMGCASLLNGLGLFLIQSRNPNSL HHHHHHCCCCHHHHHHHHHHCCHHEEEEECCCCCCC >Mature Secondary Structure MYEVAHARSQRLHIPIVTWLYWIGVHIPALVLYALVLPYFYQDHPDGGELFVFGLLIVIM CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LSAIGSMSYGQAWILKRTIDPNSFKHWFRATIAAYCAVSIAKYMLSIDHLLFSMFRTSNT HHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SNPFVHWIEPQLISVAITCLVISSVQAWILRKAGYRMLHWIPTMLLSWVVVSLTIASFNS CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH LYAEAFSGSTVLVMGCASLLNGLGLFLIQSRNPNSL HHHHHHCCCCHHHHHHHHHHCCHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA