Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is gmk [H]
Identifier: 159897148
GI number: 159897148
Start: 715409
End: 716041
Strand: Direct
Name: gmk [H]
Synonym: Haur_0619
Alternate gene names: 159897148
Gene position: 715409-716041 (Clockwise)
Preceding gene: 159897146
Following gene: 159897149
Centisome position: 11.27
GC content: 53.08
Gene sequence:
>633_bases GTGTCACACCCAGAACTCAACCCGATTTTGCACAACCAAGCTCCTGTGCCATTACTGGTCATTATTTCAGGCCCATCAGG GGTTGGCAAAGATACGGTGTTGATGCGAATGCGCGAATTTGGCATGCCCTTTCATTTTGTGGTCACCACTACCAGCCGTG GCCAACGCCCAGGTGAATTAGAGGGCTTTGATTATAATTTTGTTTCCAAAGCCGAGTTTGAGACCATGATCGCCCAAAAC GACCTTTTGGAGCATGCGGTCGTTTATGGCGAATACAAGGGCATTCCCAAATCGCAGGTACGCGATGCCTTGGCGAGCGG CAAAGATGTAATTTTGCGGATCGATGTGCAGGGCGCGGCCACCATGCGCAAATTAGTGCCCGATGCGGTGTTGATTTTCA TCGTGCCACCTTCAAGCGCCGAATTGGCCAACCGCTTACGCCTACGCCGCACCGAATCAGCAGAGGGCTTAGAACGGCGC ATGGCCTTGGCCGAAGAAGAAATGGGTCGCGTCGATGAATTTGATTATGTGGTGATGAACCCCGAATCGCGGCCTGACGA AGCCGCCAGCATGATTCAAGCGATCATTCGCGCCGAAAAATCACGCATCCGCCCCCGCCGCATTAAACTGTAG
Upstream 100 bases:
>100_bases CAACTAGCGCATCAATGTGCATAGACGATTCTCCTTCAATGGCTCAATCGTACTCAAGCATTGGCAGAACGTCAATAATT CCCTTAGTTTAGGAGGCATT
Downstream 100 bases:
>100_bases CCTCTCAAATGGGCTTAATTGGCCAAAGCATGGCTGATTAAGCCCATTTCCTCAGCATTTTTTCATCAAACGAGTACTTT CGTGCAAACGAAAAACCCCC
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSHPELNPILHNQAPVPLLVIISGPSGVGKDTVLMRMREFGMPFHFVVTTTSRGQRPGELEGFDYNFVSKAEFETMIAQN DLLEHAVVYGEYKGIPKSQVRDALASGKDVILRIDVQGAATMRKLVPDAVLIFIVPPSSAELANRLRLRRTESAEGLERR MALAEEEMGRVDEFDYVVMNPESRPDEAASMIQAIIRAEKSRIRPRRIKL
Sequences:
>Translated_210_residues MSHPELNPILHNQAPVPLLVIISGPSGVGKDTVLMRMREFGMPFHFVVTTTSRGQRPGELEGFDYNFVSKAEFETMIAQN DLLEHAVVYGEYKGIPKSQVRDALASGKDVILRIDVQGAATMRKLVPDAVLIFIVPPSSAELANRLRLRRTESAEGLERR MALAEEEMGRVDEFDYVVMNPESRPDEAASMIQAIIRAEKSRIRPRRIKL >Mature_209_residues SHPELNPILHNQAPVPLLVIISGPSGVGKDTVLMRMREFGMPFHFVVTTTSRGQRPGELEGFDYNFVSKAEFETMIAQND LLEHAVVYGEYKGIPKSQVRDALASGKDVILRIDVQGAATMRKLVPDAVLIFIVPPSSAELANRLRLRRTESAEGLERRM ALAEEEMGRVDEFDYVVMNPESRPDEAASMIQAIIRAEKSRIRPRRIKL
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=168, Percent_Identity=38.0952380952381, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI4504221, Length=168, Percent_Identity=38.0952380952381, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI226874831, Length=168, Percent_Identity=38.0952380952381, Blast_Score=104, Evalue=4e-23, Organism=Homo sapiens, GI14780902, Length=203, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI38570142, Length=124, Percent_Identity=33.0645161290323, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1790080, Length=188, Percent_Identity=41.4893617021277, Blast_Score=137, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17508835, Length=168, Percent_Identity=37.5, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI193203132, Length=168, Percent_Identity=37.5, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6320662, Length=186, Percent_Identity=39.247311827957, Blast_Score=123, Evalue=2e-29, Organism=Drosophila melanogaster, GI21356141, Length=156, Percent_Identity=38.4615384615385, Blast_Score=103, Evalue=9e-23, Organism=Drosophila melanogaster, GI45554489, Length=167, Percent_Identity=27.5449101796407, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24640542, Length=167, Percent_Identity=27.5449101796407, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI116007136, Length=167, Percent_Identity=27.5449101796407, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI85724806, Length=167, Percent_Identity=27.5449101796407, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI161077626, Length=167, Percent_Identity=27.5449101796407, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI45554481, Length=167, Percent_Identity=27.5449101796407, Blast_Score=67, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 23542; Mature: 23410
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPELNPILHNQAPVPLLVIISGPSGVGKDTVLMRMREFGMPFHFVVTTTSRGQRPGEL CCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCC EGFDYNFVSKAEFETMIAQNDLLEHAVVYGEYKGIPKSQVRDALASGKDVILRIDVQGAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCHH TMRKLVPDAVLIFIVPPSSAELANRLRLRRTESAEGLERRMALAEEEMGRVDEFDYVVMN HHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEC PESRPDEAASMIQAIIRAEKSRIRPRRIKL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SHPELNPILHNQAPVPLLVIISGPSGVGKDTVLMRMREFGMPFHFVVTTTSRGQRPGEL CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCC EGFDYNFVSKAEFETMIAQNDLLEHAVVYGEYKGIPKSQVRDALASGKDVILRIDVQGAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCHH TMRKLVPDAVLIFIVPPSSAELANRLRLRRTESAEGLERRMALAEEEMGRVDEFDYVVMN HHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEC PESRPDEAASMIQAIIRAEKSRIRPRRIKL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA