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The map label for this gene is crtI [H]

Identifier: 159897138

GI number: 159897138

Start: 701931

End: 703418

Strand: Direct

Name: crtI [H]

Synonym: Haur_0609

Alternate gene names: 159897138

Gene position: 701931-703418 (Clockwise)

Preceding gene: 159897137

Following gene: 159897139

Centisome position: 11.06

GC content: 52.15

Gene sequence:

>1488_bases
ATGCAGCATGTGGTGATTGTTGGCGGCGGTTTAGGTGGTTTGGCAGCAGCCTTGCGGCTACGGGCGGCTGGTGTCGCCGT
AACTTTATTTGAAAAAAACACGGCCCTTGGTGGCAAAATGGCCCAAGTTGTGCAACATGGCTTTCGCTTTGATACAGGAC
CATCGCTGTTTACGATGCCATGGGTGGTGGAAGAATTGCTCGCCAGTGTTGGGCGTGATCTCGCCAGCGAACTGACAATT
AAGCCGGTTGATCCAACCTGCCGTTATCAATGGCCTGATGGCACACGCCTCGATGCTTGGAGCGATCTGCCCAAGCTTTT
GAAAGAAATTGAACGCCTCGAACCAGCCGATGTTGCAGGCTTTTTGGGCTTTATGGCATTTAGCGCCCAGATTTATCAAG
CAGCGGCTGAGCCATTTTTGCTTGAGCCATTTCAGGGCTTGCGCACAATGCTGCAACCACGTTTACTGCGCGATGTTTGG
AAAATTGCCCCCTTGAAAACTGTTGATCAAGCGGTGCGCCACTATTTCAAACACCCCTATCTGCGCCAGTTGTTCAATCG
CTATGCTACCTATAATGGCTCCTCGCCCTATCGTTCGCCCGCGACGTTTTGTATTATTCCTTATGTTGAAATCGCCCAAG
GCGGCTGGTATATCGACGGTGGTATGTATCAATTGGCGGCGACGCTAGGCCGAATTGCTGGCGAAATGGGTGTCGATATT
CAGTTAAATAGTTTGGTTAGCGAAGTTATTGTAACCAACAAAACCGCTACTGGTGTGCGTTTGAGCGATGGCCGCACGAT
TAATGCCGATTATGTGATTGTGAATGCTGATGCGATGTATGCGCTTGATCAGCTGATTCCAACCACCAAAGCGCCAACCC
ACGAATTGGCGTGCTCAGGTTTTGTGTTGCTGTTGGGGGTTAATCGCGATTACGCTCAATTGCAGCATCACAACATTTTC
TTTAGCGGCGATTATGCCGCCGAATTTCGGGCAATTTTTGAGCATGGTGTGCCAGCAGTTGACCCGACAATCTATATCGC
TGCAACCTGCCGCTCGAACCCTGAGCATGCCCCGCCTGGAATGCTGAATTTATTTGTGCTGGTCAATGCCCCAGTCACAG
GTCGGGTGAATTGGCAACGCGAGGCGGCGGCCTATCGTGATTTAGTGGTGCGCCGTTTGGAGCAGCATGGCTTGGTTGGG
CTGAATCAAGCGATTATCAGCGAAACTATGCTCACGCCTGCTGATCTGGCGAGCATGACCAATGCCCAGCGTGGCTCGTT
GTATGGCCCTGCCTCGCATGGCTTACAGGCAGCCTTTTTGCGGCCAGCCAATCAGCCAGCAGGCTTGCAGAATTTGGCCC
TTGTTGGTGGGGCGACCCATCCTGGTGGTGGAATTCCGCTGGTGTTGTTGTCGGGCAAAGCTGGGGCACGCTGGGCATTG
CAAAGATTAGGAGTTGCTGAGAAGCCCAAACTTGGGACTATTTTCTGA

Upstream 100 bases:

>100_bases
CGCTCACCCGCCGTTAAGCGATATTTTCGGCTTGGCAACTCAACACGCGGTACAATAGCACAGAATGCGGAGTATCAGGC
ATTGATTTAAGGATGAGTGC

Downstream 100 bases:

>100_bases
TAGTCAGGTTGGTCAAAGATCGCTACGATGCGACTGTGGTAGCAGTTTGCTTGCCAAAATACAGCTGTTGGATGAAAGGA
ATAATGTTATGAGTAATACC

Product: zeta-phytoene desaturase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MQHVVIVGGGLGGLAAALRLRAAGVAVTLFEKNTALGGKMAQVVQHGFRFDTGPSLFTMPWVVEELLASVGRDLASELTI
KPVDPTCRYQWPDGTRLDAWSDLPKLLKEIERLEPADVAGFLGFMAFSAQIYQAAAEPFLLEPFQGLRTMLQPRLLRDVW
KIAPLKTVDQAVRHYFKHPYLRQLFNRYATYNGSSPYRSPATFCIIPYVEIAQGGWYIDGGMYQLAATLGRIAGEMGVDI
QLNSLVSEVIVTNKTATGVRLSDGRTINADYVIVNADAMYALDQLIPTTKAPTHELACSGFVLLLGVNRDYAQLQHHNIF
FSGDYAAEFRAIFEHGVPAVDPTIYIAATCRSNPEHAPPGMLNLFVLVNAPVTGRVNWQREAAAYRDLVVRRLEQHGLVG
LNQAIISETMLTPADLASMTNAQRGSLYGPASHGLQAAFLRPANQPAGLQNLALVGGATHPGGGIPLVLLSGKAGARWAL
QRLGVAEKPKLGTIF

Sequences:

>Translated_495_residues
MQHVVIVGGGLGGLAAALRLRAAGVAVTLFEKNTALGGKMAQVVQHGFRFDTGPSLFTMPWVVEELLASVGRDLASELTI
KPVDPTCRYQWPDGTRLDAWSDLPKLLKEIERLEPADVAGFLGFMAFSAQIYQAAAEPFLLEPFQGLRTMLQPRLLRDVW
KIAPLKTVDQAVRHYFKHPYLRQLFNRYATYNGSSPYRSPATFCIIPYVEIAQGGWYIDGGMYQLAATLGRIAGEMGVDI
QLNSLVSEVIVTNKTATGVRLSDGRTINADYVIVNADAMYALDQLIPTTKAPTHELACSGFVLLLGVNRDYAQLQHHNIF
FSGDYAAEFRAIFEHGVPAVDPTIYIAATCRSNPEHAPPGMLNLFVLVNAPVTGRVNWQREAAAYRDLVVRRLEQHGLVG
LNQAIISETMLTPADLASMTNAQRGSLYGPASHGLQAAFLRPANQPAGLQNLALVGGATHPGGGIPLVLLSGKAGARWAL
QRLGVAEKPKLGTIF
>Mature_495_residues
MQHVVIVGGGLGGLAAALRLRAAGVAVTLFEKNTALGGKMAQVVQHGFRFDTGPSLFTMPWVVEELLASVGRDLASELTI
KPVDPTCRYQWPDGTRLDAWSDLPKLLKEIERLEPADVAGFLGFMAFSAQIYQAAAEPFLLEPFQGLRTMLQPRLLRDVW
KIAPLKTVDQAVRHYFKHPYLRQLFNRYATYNGSSPYRSPATFCIIPYVEIAQGGWYIDGGMYQLAATLGRIAGEMGVDI
QLNSLVSEVIVTNKTATGVRLSDGRTINADYVIVNADAMYALDQLIPTTKAPTHELACSGFVLLLGVNRDYAQLQHHNIF
FSGDYAAEFRAIFEHGVPAVDPTIYIAATCRSNPEHAPPGMLNLFVLVNAPVTGRVNWQREAAAYRDLVVRRLEQHGLVG
LNQAIISETMLTPADLASMTNAQRGSLYGPASHGLQAAFLRPANQPAGLQNLALVGGATHPGGGIPLVLLSGKAGARWAL
QRLGVAEKPKLGTIF

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 53770; Mature: 53770

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHVVIVGGGLGGLAAALRLRAAGVAVTLFEKNTALGGKMAQVVQHGFRFDTGPSLFTMP
CCEEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEHH
WVVEELLASVGRDLASELTIKPVDPTCRYQWPDGTRLDAWSDLPKLLKEIERLEPADVAG
HHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
FLGFMAFSAQIYQAAAEPFLLEPFQGLRTMLQPRLLRDVWKIAPLKTVDQAVRHYFKHPY
HHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHH
LRQLFNRYATYNGSSPYRSPATFCIIPYVEIAQGGWYIDGGMYQLAATLGRIAGEMGVDI
HHHHHHHHHCCCCCCCCCCCCCEEEEECCEECCCCEEECCHHHHHHHHHHHHHHHCCCCE
QLNSLVSEVIVTNKTATGVRLSDGRTINADYVIVNADAMYALDQLIPTTKAPTHELACSG
EHHHHHHHHHHCCCCCCCEEECCCCEECCCEEEEECHHHHHHHHHCCCCCCCCHHHHHCC
FVLLLGVNRDYAQLQHHNIFFSGDYAAEFRAIFEHGVPAVDPTIYIAATCRSNPEHAPPG
EEEEEECCCHHHHHHHCEEEEECCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCC
MLNLFVLVNAPVTGRVNWQREAAAYRDLVVRRLEQHGLVGLNQAIISETMLTPADLASMT
CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHC
NAQRGSLYGPASHGLQAAFLRPANQPAGLQNLALVGGATHPGGGIPLVLLSGKAGARWAL
CCCCCCCCCCHHCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHH
QRLGVAEKPKLGTIF
HHCCCCCCCCCCCCC
>Mature Secondary Structure
MQHVVIVGGGLGGLAAALRLRAAGVAVTLFEKNTALGGKMAQVVQHGFRFDTGPSLFTMP
CCEEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEHH
WVVEELLASVGRDLASELTIKPVDPTCRYQWPDGTRLDAWSDLPKLLKEIERLEPADVAG
HHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
FLGFMAFSAQIYQAAAEPFLLEPFQGLRTMLQPRLLRDVWKIAPLKTVDQAVRHYFKHPY
HHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHH
LRQLFNRYATYNGSSPYRSPATFCIIPYVEIAQGGWYIDGGMYQLAATLGRIAGEMGVDI
HHHHHHHHHCCCCCCCCCCCCCEEEEECCEECCCCEEECCHHHHHHHHHHHHHHHCCCCE
QLNSLVSEVIVTNKTATGVRLSDGRTINADYVIVNADAMYALDQLIPTTKAPTHELACSG
EHHHHHHHHHHCCCCCCCEEECCCCEECCCEEEEECHHHHHHHHHCCCCCCCCHHHHHCC
FVLLLGVNRDYAQLQHHNIFFSGDYAAEFRAIFEHGVPAVDPTIYIAATCRSNPEHAPPG
EEEEEECCCHHHHHHHCEEEEECCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCC
MLNLFVLVNAPVTGRVNWQREAAAYRDLVVRRLEQHGLVGLNQAIISETMLTPADLASMT
CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHC
NAQRGSLYGPASHGLQAAFLRPANQPAGLQNLALVGGATHPGGGIPLVLLSGKAGARWAL
CCCCCCCCCCHHCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHH
QRLGVAEKPKLGTIF
HHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2263648 [H]