The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159896960

Identifier: 159896960

GI number: 159896960

Start: 499212

End: 500303

Strand: Direct

Name: 159896960

Synonym: Haur_0428

Alternate gene names: NA

Gene position: 499212-500303 (Clockwise)

Preceding gene: 159896959

Following gene: 159896962

Centisome position: 7.87

GC content: 52.47

Gene sequence:

>1092_bases
ATGAGCAATCGTGCAGTCAGCCGTCGTTGGAGCTTACAACCCAACCCAATCGTGGTCAAAGAGTTACGTTCGCGCATGCG
CGGTGGCCGAGCGTTTATCTTGCTCACCGGCTTTTTGCTTGGCTTAGGTTTGGTTGGCTATGCTTTGTTTTTGCGAGCAA
CCAGCGGCCAAGCAGCGGGCATGCCGATCTTTAGCGCCCAAATTGGCCAAACCTTGTTTGCAGGTTTAGCCTTTATGTTG
CTGTTTTTGGTGATTTTAATTGCCCCAGCAGTAACAGTTGGCGCTATCAGCAGCGAACGCGAACGGCTAACCTATGAAAT
GTTGATCGCCACGAATCTGCCATCACATCGCTTGCTGTGGGGCAAATTGATCTCAGCGCTTTCGTATATTGCGCTCTTGT
TGCTGGCGGCGATTCCACTGGGCAGTATCGTCTTTTTATTTGGCGGGATTACGCTGCGTCATGTGCTGCAAGCAGCCGCA
ATTATTGTGTTAAGCGCGATCACCAGCGCCATGCTTGGCATTTGGGCTTCGGCCATGACTGGTAAAACCGGACGGGCAGC
AGTAGTCAGTTATGTGATTATTGGCTTGGTGTTAGGTGGATTTTTGGCTGGAGCTGAAATCTGGACTAACCGCTCGACTG
AACCTGTGCCCACTGGCCTCTTAGCCCCCAACCCGATCAGCGCCTTGGCTTCAAGCATTGGCACTTTGTCGGGGCCAAGC
AATGGCGGGATGATTACCACAATGCGAGCGTTTGAAGCAGTGCCAATGGCGGCTGGCGGCGGTTGGTGGCCTGGAATGAA
TTCGTTTAGTGGGGGCTTGAATTTCCCAGGCTGGCAAACCTTTTCAATTGGAATTTACCCAGCCACCGATCAATTTGGCC
CTGATGGCATGCCAATTATTGCCGAGCCACGTTCGGTTTGGCGCACGACCTTGATTATTTTGATTATGACATGCTTGGTG
TTCTTCTGGATGGCGCTGCATGCGGTCAAACCACGTCGTCGCTGGTGGCCAACTTGGGGCGATTTGGCGATGCTGTCGGT
CACCTCGTTGAGTTTGCTTGGCCTTGGCTATTGGATTGGCTGGTGGTTTTAG

Upstream 100 bases:

>100_bases
CGCGGGCCGAGCTACCAATTGCCGATTTTCATCGTGAGGACGATTCGCTAGAACGGCTGTTTTTGCAGCTTGTCAACAAC
CATGGTCTGGAGGAACGAGT

Downstream 100 bases:

>100_bases
CAATCGTGTTCAGCAATCGTTGGTAGTATTCTCGTCTCGCTGATAACAAAGGCGGTTGCAAGTTTGCTTGCAACCGCCTT
TGACGATTAGGATTATGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSNRAVSRRWSLQPNPIVVKELRSRMRGGRAFILLTGFLLGLGLVGYALFLRATSGQAAGMPIFSAQIGQTLFAGLAFML
LFLVILIAPAVTVGAISSERERLTYEMLIATNLPSHRLLWGKLISALSYIALLLLAAIPLGSIVFLFGGITLRHVLQAAA
IIVLSAITSAMLGIWASAMTGKTGRAAVVSYVIIGLVLGGFLAGAEIWTNRSTEPVPTGLLAPNPISALASSIGTLSGPS
NGGMITTMRAFEAVPMAAGGGWWPGMNSFSGGLNFPGWQTFSIGIYPATDQFGPDGMPIIAEPRSVWRTTLIILIMTCLV
FFWMALHAVKPRRRWWPTWGDLAMLSVTSLSLLGLGYWIGWWF

Sequences:

>Translated_363_residues
MSNRAVSRRWSLQPNPIVVKELRSRMRGGRAFILLTGFLLGLGLVGYALFLRATSGQAAGMPIFSAQIGQTLFAGLAFML
LFLVILIAPAVTVGAISSERERLTYEMLIATNLPSHRLLWGKLISALSYIALLLLAAIPLGSIVFLFGGITLRHVLQAAA
IIVLSAITSAMLGIWASAMTGKTGRAAVVSYVIIGLVLGGFLAGAEIWTNRSTEPVPTGLLAPNPISALASSIGTLSGPS
NGGMITTMRAFEAVPMAAGGGWWPGMNSFSGGLNFPGWQTFSIGIYPATDQFGPDGMPIIAEPRSVWRTTLIILIMTCLV
FFWMALHAVKPRRRWWPTWGDLAMLSVTSLSLLGLGYWIGWWF
>Mature_362_residues
SNRAVSRRWSLQPNPIVVKELRSRMRGGRAFILLTGFLLGLGLVGYALFLRATSGQAAGMPIFSAQIGQTLFAGLAFMLL
FLVILIAPAVTVGAISSERERLTYEMLIATNLPSHRLLWGKLISALSYIALLLLAAIPLGSIVFLFGGITLRHVLQAAAI
IVLSAITSAMLGIWASAMTGKTGRAAVVSYVIIGLVLGGFLAGAEIWTNRSTEPVPTGLLAPNPISALASSIGTLSGPSN
GGMITTMRAFEAVPMAAGGGWWPGMNSFSGGLNFPGWQTFSIGIYPATDQFGPDGMPIIAEPRSVWRTTLIILIMTCLVF
FWMALHAVKPRRRWWPTWGDLAMLSVTSLSLLGLGYWIGWWF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38984; Mature: 38853

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRAVSRRWSLQPNPIVVKELRSRMRGGRAFILLTGFLLGLGLVGYALFLRATSGQAAG
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
MPIFSAQIGQTLFAGLAFMLLFLVILIAPAVTVGAISSERERLTYEMLIATNLPSHRLLW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCHHHHH
GKLISALSYIALLLLAAIPLGSIVFLFGGITLRHVLQAAAIIVLSAITSAMLGIWASAMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKTGRAAVVSYVIIGLVLGGFLAGAEIWTNRSTEPVPTGLLAPNPISALASSIGTLSGPS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
NGGMITTMRAFEAVPMAAGGGWWPGMNSFSGGLNFPGWQTFSIGIYPATDQFGPDGMPII
CCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEE
AEPRSVWRTTLIILIMTCLVFFWMALHAVKPRRRWWPTWGDLAMLSVTSLSLLGLGYWIG
ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHH
WWF
HCC
>Mature Secondary Structure 
SNRAVSRRWSLQPNPIVVKELRSRMRGGRAFILLTGFLLGLGLVGYALFLRATSGQAAG
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
MPIFSAQIGQTLFAGLAFMLLFLVILIAPAVTVGAISSERERLTYEMLIATNLPSHRLLW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCHHHHH
GKLISALSYIALLLLAAIPLGSIVFLFGGITLRHVLQAAAIIVLSAITSAMLGIWASAMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKTGRAAVVSYVIIGLVLGGFLAGAEIWTNRSTEPVPTGLLAPNPISALASSIGTLSGPS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
NGGMITTMRAFEAVPMAAGGGWWPGMNSFSGGLNFPGWQTFSIGIYPATDQFGPDGMPII
CCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEE
AEPRSVWRTTLIILIMTCLVFFWMALHAVKPRRRWWPTWGDLAMLSVTSLSLLGLGYWIG
ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHH
WWF
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA