Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159896960
Identifier: 159896960
GI number: 159896960
Start: 499212
End: 500303
Strand: Direct
Name: 159896960
Synonym: Haur_0428
Alternate gene names: NA
Gene position: 499212-500303 (Clockwise)
Preceding gene: 159896959
Following gene: 159896962
Centisome position: 7.87
GC content: 52.47
Gene sequence:
>1092_bases ATGAGCAATCGTGCAGTCAGCCGTCGTTGGAGCTTACAACCCAACCCAATCGTGGTCAAAGAGTTACGTTCGCGCATGCG CGGTGGCCGAGCGTTTATCTTGCTCACCGGCTTTTTGCTTGGCTTAGGTTTGGTTGGCTATGCTTTGTTTTTGCGAGCAA CCAGCGGCCAAGCAGCGGGCATGCCGATCTTTAGCGCCCAAATTGGCCAAACCTTGTTTGCAGGTTTAGCCTTTATGTTG CTGTTTTTGGTGATTTTAATTGCCCCAGCAGTAACAGTTGGCGCTATCAGCAGCGAACGCGAACGGCTAACCTATGAAAT GTTGATCGCCACGAATCTGCCATCACATCGCTTGCTGTGGGGCAAATTGATCTCAGCGCTTTCGTATATTGCGCTCTTGT TGCTGGCGGCGATTCCACTGGGCAGTATCGTCTTTTTATTTGGCGGGATTACGCTGCGTCATGTGCTGCAAGCAGCCGCA ATTATTGTGTTAAGCGCGATCACCAGCGCCATGCTTGGCATTTGGGCTTCGGCCATGACTGGTAAAACCGGACGGGCAGC AGTAGTCAGTTATGTGATTATTGGCTTGGTGTTAGGTGGATTTTTGGCTGGAGCTGAAATCTGGACTAACCGCTCGACTG AACCTGTGCCCACTGGCCTCTTAGCCCCCAACCCGATCAGCGCCTTGGCTTCAAGCATTGGCACTTTGTCGGGGCCAAGC AATGGCGGGATGATTACCACAATGCGAGCGTTTGAAGCAGTGCCAATGGCGGCTGGCGGCGGTTGGTGGCCTGGAATGAA TTCGTTTAGTGGGGGCTTGAATTTCCCAGGCTGGCAAACCTTTTCAATTGGAATTTACCCAGCCACCGATCAATTTGGCC CTGATGGCATGCCAATTATTGCCGAGCCACGTTCGGTTTGGCGCACGACCTTGATTATTTTGATTATGACATGCTTGGTG TTCTTCTGGATGGCGCTGCATGCGGTCAAACCACGTCGTCGCTGGTGGCCAACTTGGGGCGATTTGGCGATGCTGTCGGT CACCTCGTTGAGTTTGCTTGGCCTTGGCTATTGGATTGGCTGGTGGTTTTAG
Upstream 100 bases:
>100_bases CGCGGGCCGAGCTACCAATTGCCGATTTTCATCGTGAGGACGATTCGCTAGAACGGCTGTTTTTGCAGCTTGTCAACAAC CATGGTCTGGAGGAACGAGT
Downstream 100 bases:
>100_bases CAATCGTGTTCAGCAATCGTTGGTAGTATTCTCGTCTCGCTGATAACAAAGGCGGTTGCAAGTTTGCTTGCAACCGCCTT TGACGATTAGGATTATGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSNRAVSRRWSLQPNPIVVKELRSRMRGGRAFILLTGFLLGLGLVGYALFLRATSGQAAGMPIFSAQIGQTLFAGLAFML LFLVILIAPAVTVGAISSERERLTYEMLIATNLPSHRLLWGKLISALSYIALLLLAAIPLGSIVFLFGGITLRHVLQAAA IIVLSAITSAMLGIWASAMTGKTGRAAVVSYVIIGLVLGGFLAGAEIWTNRSTEPVPTGLLAPNPISALASSIGTLSGPS NGGMITTMRAFEAVPMAAGGGWWPGMNSFSGGLNFPGWQTFSIGIYPATDQFGPDGMPIIAEPRSVWRTTLIILIMTCLV FFWMALHAVKPRRRWWPTWGDLAMLSVTSLSLLGLGYWIGWWF
Sequences:
>Translated_363_residues MSNRAVSRRWSLQPNPIVVKELRSRMRGGRAFILLTGFLLGLGLVGYALFLRATSGQAAGMPIFSAQIGQTLFAGLAFML LFLVILIAPAVTVGAISSERERLTYEMLIATNLPSHRLLWGKLISALSYIALLLLAAIPLGSIVFLFGGITLRHVLQAAA IIVLSAITSAMLGIWASAMTGKTGRAAVVSYVIIGLVLGGFLAGAEIWTNRSTEPVPTGLLAPNPISALASSIGTLSGPS NGGMITTMRAFEAVPMAAGGGWWPGMNSFSGGLNFPGWQTFSIGIYPATDQFGPDGMPIIAEPRSVWRTTLIILIMTCLV FFWMALHAVKPRRRWWPTWGDLAMLSVTSLSLLGLGYWIGWWF >Mature_362_residues SNRAVSRRWSLQPNPIVVKELRSRMRGGRAFILLTGFLLGLGLVGYALFLRATSGQAAGMPIFSAQIGQTLFAGLAFMLL FLVILIAPAVTVGAISSERERLTYEMLIATNLPSHRLLWGKLISALSYIALLLLAAIPLGSIVFLFGGITLRHVLQAAAI IVLSAITSAMLGIWASAMTGKTGRAAVVSYVIIGLVLGGFLAGAEIWTNRSTEPVPTGLLAPNPISALASSIGTLSGPSN GGMITTMRAFEAVPMAAGGGWWPGMNSFSGGLNFPGWQTFSIGIYPATDQFGPDGMPIIAEPRSVWRTTLIILIMTCLVF FWMALHAVKPRRRWWPTWGDLAMLSVTSLSLLGLGYWIGWWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38984; Mature: 38853
Theoretical pI: Translated: 11.51; Mature: 11.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRAVSRRWSLQPNPIVVKELRSRMRGGRAFILLTGFLLGLGLVGYALFLRATSGQAAG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC MPIFSAQIGQTLFAGLAFMLLFLVILIAPAVTVGAISSERERLTYEMLIATNLPSHRLLW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCHHHHH GKLISALSYIALLLLAAIPLGSIVFLFGGITLRHVLQAAAIIVLSAITSAMLGIWASAMT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKTGRAAVVSYVIIGLVLGGFLAGAEIWTNRSTEPVPTGLLAPNPISALASSIGTLSGPS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC NGGMITTMRAFEAVPMAAGGGWWPGMNSFSGGLNFPGWQTFSIGIYPATDQFGPDGMPII CCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEE AEPRSVWRTTLIILIMTCLVFFWMALHAVKPRRRWWPTWGDLAMLSVTSLSLLGLGYWIG ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHH WWF HCC >Mature Secondary Structure SNRAVSRRWSLQPNPIVVKELRSRMRGGRAFILLTGFLLGLGLVGYALFLRATSGQAAG CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC MPIFSAQIGQTLFAGLAFMLLFLVILIAPAVTVGAISSERERLTYEMLIATNLPSHRLLW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCHHHHH GKLISALSYIALLLLAAIPLGSIVFLFGGITLRHVLQAAAIIVLSAITSAMLGIWASAMT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKTGRAAVVSYVIIGLVLGGFLAGAEIWTNRSTEPVPTGLLAPNPISALASSIGTLSGPS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC NGGMITTMRAFEAVPMAAGGGWWPGMNSFSGGLNFPGWQTFSIGIYPATDQFGPDGMPII CCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEE AEPRSVWRTTLIILIMTCLVFFWMALHAVKPRRRWWPTWGDLAMLSVTSLSLLGLGYWIG ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHH WWF HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA