The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159896955

Identifier: 159896955

GI number: 159896955

Start: 494305

End: 494784

Strand: Direct

Name: 159896955

Synonym: Haur_0423

Alternate gene names: NA

Gene position: 494305-494784 (Clockwise)

Preceding gene: 159896954

Following gene: 159896956

Centisome position: 7.79

GC content: 42.5

Gene sequence:

>480_bases
ATGCAACAGCTCGTTCTGGCCTGTGGCTACAATCCATTCGGCTATGTGATTTTCTTCTTCATCATGGTCATTCCATTTAG
CCTGACTTTAGGCATCAAATGGTTTTTTCTGGCGCAAACGCTACGCGCATCCCACCGTTCGTTATTTCTCCATAGCTTAG
GATTAACCTTTATCGTAGGATTGGTGATTGGCTTCGTTTTCATCTCTGCTTATATTCTACCAACTTCTTTATTTGTAATA
GAAATCGGGGGTTTCTATTCGTATCAATTTTTTATTTGGGCCATCGTTTGCATTGTCGATACGTTCTTGATTGAACGCTG
GTTGCTCAAACCGAAAGCCCAAGCAATCAGCCTAACCGACGATCAGCAATTACAGGTTGAGGCAGCAGCGATTAAATATC
AGCCATCCTGGGTCGCTGCCCTCCTTTCGAATACATTAATTGCGATCGTCGTCGCTTTGTTTTTTCAAATGATCGATTAA

Upstream 100 bases:

>100_bases
ATGATTAACTTGTTTGCAATTGCGGCGGCAATTCTTAGTAGTTTACTCTTGTTCTTCGTCAGCGTATTTGTATTGAGCTA
AATGAGCGCAAGGAGTAGCT

Downstream 100 bases:

>100_bases
CTAGCAGTGAGGCCGCCATGCAGCAGATTTTGATTGCTTGTGGCTCCAATCAATTAGGTCAAATTTTTGCCTTAGTTGGG
GTATTAGTTCTATTTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MQQLVLACGYNPFGYVIFFFIMVIPFSLTLGIKWFFLAQTLRASHRSLFLHSLGLTFIVGLVIGFVFISAYILPTSLFVI
EIGGFYSYQFFIWAIVCIVDTFLIERWLLKPKAQAISLTDDQQLQVEAAAIKYQPSWVAALLSNTLIAIVVALFFQMID

Sequences:

>Translated_159_residues
MQQLVLACGYNPFGYVIFFFIMVIPFSLTLGIKWFFLAQTLRASHRSLFLHSLGLTFIVGLVIGFVFISAYILPTSLFVI
EIGGFYSYQFFIWAIVCIVDTFLIERWLLKPKAQAISLTDDQQLQVEAAAIKYQPSWVAALLSNTLIAIVVALFFQMID
>Mature_159_residues
MQQLVLACGYNPFGYVIFFFIMVIPFSLTLGIKWFFLAQTLRASHRSLFLHSLGLTFIVGLVIGFVFISAYILPTSLFVI
EIGGFYSYQFFIWAIVCIVDTFLIERWLLKPKAQAISLTDDQQLQVEAAAIKYQPSWVAALLSNTLIAIVVALFFQMID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18048; Mature: 18048

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLVLACGYNPFGYVIFFFIMVIPFSLTLGIKWFFLAQTLRASHRSLFLHSLGLTFIVG
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVIGFVFISAYILPTSLFVIEIGGFYSYQFFIWAIVCIVDTFLIERWLLKPKAQAISLTD
HHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
DQQLQVEAAAIKYQPSWVAALLSNTLIAIVVALFFQMID
CCHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQQLVLACGYNPFGYVIFFFIMVIPFSLTLGIKWFFLAQTLRASHRSLFLHSLGLTFIVG
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVIGFVFISAYILPTSLFVIEIGGFYSYQFFIWAIVCIVDTFLIERWLLKPKAQAISLTD
HHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
DQQLQVEAAAIKYQPSWVAALLSNTLIAIVVALFFQMID
CCHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA