Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159896921
Identifier: 159896921
GI number: 159896921
Start: 459645
End: 460040
Strand: Direct
Name: 159896921
Synonym: Haur_0389
Alternate gene names: NA
Gene position: 459645-460040 (Clockwise)
Preceding gene: 159896920
Following gene: 159896925
Centisome position: 7.24
GC content: 48.23
Gene sequence:
>396_bases ATGCTCAAACGCAACGAATCTTTAGCCTTTGGCCGCCCATTTTTGATTACGGTGATTGCAATTGGCTATGTTTTGACGGC GATGTTGGAAGTTGCAGTCGCCTTGTATGGGCGAGTGCCAGCATTCCTTGAACAATTTATTTTGTCTGATGATCCGCTTT TGTTGATTGTGACCGCATGTTTTCAAGTAATGATGGGTTTGGCGCTCTTTCAAGGCTGGCGGGTGATGTGGTGGGTGGTG ATTGGCAGCGCCTATCTTTCAATTGGCAGCTATATTTTGGATGGGATGTTGGGTGAACGTTGGGCTTGGGGCGGGATGTT GTGGAATGTGGTTGTGCTGGCCTATATGAATTCGCGCGATGTGCAGGCCTTTTTCGGGCGCGAAGTCTATTATTGA
Upstream 100 bases:
>100_bases GAATTAACCTTGGCCGAATGGATTAAGCGCCCATGGTATACCAAGGCCGCCGAGTTGGTGCTCTCGCCATTATGGCCAAT TTTGTAGAAATGGAGCAAGC
Downstream 100 bases:
>100_bases GTTTGCAAAGCTTGAGCGATTAAGTGCTCATCAGTTTCATGTTGCTGCAAAAAATCGCTCAAATGCGGGCTTTGTCGCCA GCGCAAGGCCATGGGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MLKRNESLAFGRPFLITVIAIGYVLTAMLEVAVALYGRVPAFLEQFILSDDPLLLIVTACFQVMMGLALFQGWRVMWWVV IGSAYLSIGSYILDGMLGERWAWGGMLWNVVVLAYMNSRDVQAFFGREVYY
Sequences:
>Translated_131_residues MLKRNESLAFGRPFLITVIAIGYVLTAMLEVAVALYGRVPAFLEQFILSDDPLLLIVTACFQVMMGLALFQGWRVMWWVV IGSAYLSIGSYILDGMLGERWAWGGMLWNVVVLAYMNSRDVQAFFGREVYY >Mature_131_residues MLKRNESLAFGRPFLITVIAIGYVLTAMLEVAVALYGRVPAFLEQFILSDDPLLLIVTACFQVMMGLALFQGWRVMWWVV IGSAYLSIGSYILDGMLGERWAWGGMLWNVVVLAYMNSRDVQAFFGREVYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14874; Mature: 14874
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRNESLAFGRPFLITVIAIGYVLTAMLEVAVALYGRVPAFLEQFILSDDPLLLIVTAC CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHH FQVMMGLALFQGWRVMWWVVIGSAYLSIGSYILDGMLGERWAWGGMLWNVVVLAYMNSRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC VQAFFGREVYY HHHHHCCCCCC >Mature Secondary Structure MLKRNESLAFGRPFLITVIAIGYVLTAMLEVAVALYGRVPAFLEQFILSDDPLLLIVTAC CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHH FQVMMGLALFQGWRVMWWVVIGSAYLSIGSYILDGMLGERWAWGGMLWNVVVLAYMNSRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC VQAFFGREVYY HHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA