Click here to switch to the map view.

The map label for this gene is 159046597

Identifier: 159046597

GI number: 159046597

Start: 118813

End: 119406

Strand: Direct

Name: 159046597

Synonym: Dshi_4059

Alternate gene names: NA

Gene position: 118813-119406 (Clockwise)

Preceding gene: 159046596

Following gene: 159046598

Centisome position: 94.07

GC content: 61.45

Gene sequence:

>594_bases
ATGAAAAAGACGACTATCGTAGCGGCAGTGTTGATTGCAGGTACTGCGGTCACGGCATTCGCGCATAGCGGTGCCACCGG
CATCGTGAAAGAGCGCATGGATGCCATGCTTGCAATGGGGAAGGCGGTCAAGACCGTGGCCCCGATGATGCGGGGCGAAA
CGGCCTATGACGCAGAAACAGTGCGCGATGCCGCGCGCCTGTTCCAGCAGCACGCCGGTGAGAGCATGACAAAGCTGTTC
CCAGAGGGCACAGGGGGCATGCCCTCGGAAGCCAAGGACGAGGTGTGGACCGACTGGGAGCGCTTCGCGGCATTGGCAAG
TCAGCTGGAAGAATACTCTGAGGGCCTGGAACGCGCAGCCGACAATGGATTGGGCGGCATGAGCGGCAATACCTCCATGG
ATGGCGCCTCGATGATGGGCGGCGGGTCAATGATGGGAGGCGATACAACCATGATGGGCGGGAGCACGATGATGGGCCGA
GGCGACATGATGGATGCGGCCGCCATTGCCGAAATGCCCGCCGACGCAGCATTCGCGATGACGACCCAGGTCTGTTCCGC
ATGCCATGAACGCTTCCGGGCGGAAGAAGACTGA

Upstream 100 bases:

>100_bases
CAACGAACCGAATTGCGCCCGATCAGCGATCCTCCACCGCCCCGACGGTGGGTCTGATTTCACATCGCTCGAAAAGCAGA
CCCAAAGAAGGATCGAAGAC

Downstream 100 bases:

>100_bases
CCATGCGCCGGTTCTTGACACTCGTCAGCGGGGCCGCCGTGCTGGGCGCGGCCAGCCTCGGCGTCGTGATTGCATGGCCT
GTCGGCAGTGCAGTGACTCC

Product: putative cytochrome c-like protein

Products: NA

Alternate protein names: Cytochrome C Class II; CytoChrome C Class II; CytoChrome C-

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKKTTIVAAVLIAGTAVTAFAHSGATGIVKERMDAMLAMGKAVKTVAPMMRGETAYDAETVRDAARLFQQHAGESMTKLF
PEGTGGMPSEAKDEVWTDWERFAALASQLEEYSEGLERAADNGLGGMSGNTSMDGASMMGGGSMMGGDTTMMGGSTMMGR
GDMMDAAAIAEMPADAAFAMTTQVCSACHERFRAEED

Sequences:

>Translated_197_residues
MKKTTIVAAVLIAGTAVTAFAHSGATGIVKERMDAMLAMGKAVKTVAPMMRGETAYDAETVRDAARLFQQHAGESMTKLF
PEGTGGMPSEAKDEVWTDWERFAALASQLEEYSEGLERAADNGLGGMSGNTSMDGASMMGGGSMMGGDTTMMGGSTMMGR
GDMMDAAAIAEMPADAAFAMTTQVCSACHERFRAEED
>Mature_197_residues
MKKTTIVAAVLIAGTAVTAFAHSGATGIVKERMDAMLAMGKAVKTVAPMMRGETAYDAETVRDAARLFQQHAGESMTKLF
PEGTGGMPSEAKDEVWTDWERFAALASQLEEYSEGLERAADNGLGGMSGNTSMDGASMMGGGSMMGGDTTMMGGSTMMGR
GDMMDAAAIAEMPADAAFAMTTQVCSACHERFRAEED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20625; Mature: 20625

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS51009 CYTCII

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
11.2 %Met     (Translated Protein)
12.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
11.2 %Met     (Mature Protein)
12.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTIVAAVLIAGTAVTAFAHSGATGIVKERMDAMLAMGKAVKTVAPMMRGETAYDAET
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VRDAARLFQQHAGESMTKLFPEGTGGMPSEAKDEVWTDWERFAALASQLEEYSEGLERAA
HHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNGLGGMSGNTSMDGASMMGGGSMMGGDTTMMGGSTMMGRGDMMDAAAIAEMPADAAFAM
HCCCCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCHHHHHH
TTQVCSACHERFRAEED
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKTTIVAAVLIAGTAVTAFAHSGATGIVKERMDAMLAMGKAVKTVAPMMRGETAYDAET
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VRDAARLFQQHAGESMTKLFPEGTGGMPSEAKDEVWTDWERFAALASQLEEYSEGLERAA
HHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNGLGGMSGNTSMDGASMMGGGSMMGGDTTMMGGSTMMGRGDMMDAAAIAEMPADAAFAM
HCCCCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCHHHHHH
TTQVCSACHERFRAEED
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA