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The map label for this gene is ybaT [H]

Identifier: 159046481

GI number: 159046481

Start: 10774

End: 12111

Strand: Direct

Name: ybaT [H]

Synonym: Dshi_3942

Alternate gene names: 159046481

Gene position: 10774-12111 (Clockwise)

Preceding gene: 159046480

Following gene: 159046483

Centisome position: 8.53

GC content: 60.01

Gene sequence:

>1338_bases
ATGCAGAGCGAAAAAGAAACGTACCGCGAAAATTCCATCAGTCTGGGCGGAGCCGTTGCGATGGGGACAGGCGTGATGAT
CGGCGCTGGAATCTTTGCGTTGACGGGGCAAATCGCGCAGCTCGCCGGCCCGCTTTTCCCGCTTGCATTCATCGCCGGCG
CGGTCGTCACAAGCTTCAGCGCCTACAGCTACATCAGGATGTCGAACAAATGGCCGTCCTCGGGTGGCATCGCCATGATC
CTGCAGAAATGCTATGGCCCCGGAGCCATCGCGGGCGGGGCCGCACTGCTGATGGCGCTCAGCATGGTGATCGCGGAAAG
CCTCGTCGCGCGAACCTTCGCCACCTATGTCCTGCGCCCTTTCGATATCGAAGGTGGCCCATTGGTCCCCGCTCTGGCTG
TGGCCGTGATCGTTTTCGCCTTTTTGGTGAACATGGCCGGAAACCGCTCGGTCGGGCTGTTCTCGTTGATCATGGCCGCG
ATCAAGATCGGAGGCATAGCTCTGTTTGGCATCGCGGCCCTGTGGTCCAGTGGTTTTGCGTTCGCCGCGGCGTCCGAGAC
CTCACAATCCTACGGGCTCACGGGGTTCATCGCCTCTACGGCGCTGGCCATCCTTGCGTTCAAGGGATTCACCACGATCA
CCAACAGCGGAGCCGAGATCACTGAACCAAATCGCAATGTTGGCCGAGCGATCATGTTCTCTATCGGAATCTGCGTCGTC
GTCTACCTGTTGGTCGCCTACGGGGTCGGTTCGAGTCTCACGATCGAGGAGATCATCTCAGCGCGTGACTATTCGCTGGC
ACAAGCGGCGCAGCCCGCCCTTGGACAAACCGGCTTCATACTCACGGTGATCCTGGCCGCTGTCGCAACGGCGTCCGGCG
TTCTGGCCAGCGTCTTCGCGGTGTCGCGTATGCTGGCGATGCTGACCGACATGGAAATGATCCCGCACAGCCACTTCGGT
ATGCCAGGTCCCATCCAACGCCACACCCTGGTCTATACTGTCGTCATCGCCGCGACGTTGGCCGTGCTCTTTGATTTAGG
CCGGATCGCATCCCTCGGTGCTTTCTTTTACCTCGTCATGGACATGATCATACATTGGGGCGTGTTCCGCTATCGTCGAG
CAGACGTCGGCGCCTTCGGTATCGTGCTTTTGACTGCCCTGGCGCTCGATGCGATAGTACTGGCAGCTTTCACCGTGATG
AAGCTTCAAAGCGACCCGATGATCGTTCTCTACGCCGCTGTCGGGATGATCGCTGTGTTCGCCTTCGAGCGCGTTTACTT
GTCGCAATGGGTGGCACCGCAAGTCGCCCCCGCCCCCGCCCACGCCCACGGTGATTAG

Upstream 100 bases:

>100_bases
GTCAATCTCGGTGGTGCTCAATTCGCTGCGCCTTCGCGGCGTTCGTATCTAGAAGCGCGCAACAGCGTTCGGATGAACCA
AAATTAAAAGGGGGCCATTT

Downstream 100 bases:

>100_bases
CCTGCCATCACCTGGCCTGAAGAGATGCGATGCCTTGTGCGCCGATCGTGATCAGCCCGACCGACAAGGCAAACGCAGCC
AGGGCAAGCAGCATCACGCC

Product: amino acid permease-associated region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MQSEKETYRENSISLGGAVAMGTGVMIGAGIFALTGQIAQLAGPLFPLAFIAGAVVTSFSAYSYIRMSNKWPSSGGIAMI
LQKCYGPGAIAGGAALLMALSMVIAESLVARTFATYVLRPFDIEGGPLVPALAVAVIVFAFLVNMAGNRSVGLFSLIMAA
IKIGGIALFGIAALWSSGFAFAAASETSQSYGLTGFIASTALAILAFKGFTTITNSGAEITEPNRNVGRAIMFSIGICVV
VYLLVAYGVGSSLTIEEIISARDYSLAQAAQPALGQTGFILTVILAAVATASGVLASVFAVSRMLAMLTDMEMIPHSHFG
MPGPIQRHTLVYTVVIAATLAVLFDLGRIASLGAFFYLVMDMIIHWGVFRYRRADVGAFGIVLLTALALDAIVLAAFTVM
KLQSDPMIVLYAAVGMIAVFAFERVYLSQWVAPQVAPAPAHAHGD

Sequences:

>Translated_445_residues
MQSEKETYRENSISLGGAVAMGTGVMIGAGIFALTGQIAQLAGPLFPLAFIAGAVVTSFSAYSYIRMSNKWPSSGGIAMI
LQKCYGPGAIAGGAALLMALSMVIAESLVARTFATYVLRPFDIEGGPLVPALAVAVIVFAFLVNMAGNRSVGLFSLIMAA
IKIGGIALFGIAALWSSGFAFAAASETSQSYGLTGFIASTALAILAFKGFTTITNSGAEITEPNRNVGRAIMFSIGICVV
VYLLVAYGVGSSLTIEEIISARDYSLAQAAQPALGQTGFILTVILAAVATASGVLASVFAVSRMLAMLTDMEMIPHSHFG
MPGPIQRHTLVYTVVIAATLAVLFDLGRIASLGAFFYLVMDMIIHWGVFRYRRADVGAFGIVLLTALALDAIVLAAFTVM
KLQSDPMIVLYAAVGMIAVFAFERVYLSQWVAPQVAPAPAHAHGD
>Mature_445_residues
MQSEKETYRENSISLGGAVAMGTGVMIGAGIFALTGQIAQLAGPLFPLAFIAGAVVTSFSAYSYIRMSNKWPSSGGIAMI
LQKCYGPGAIAGGAALLMALSMVIAESLVARTFATYVLRPFDIEGGPLVPALAVAVIVFAFLVNMAGNRSVGLFSLIMAA
IKIGGIALFGIAALWSSGFAFAAASETSQSYGLTGFIASTALAILAFKGFTTITNSGAEITEPNRNVGRAIMFSIGICVV
VYLLVAYGVGSSLTIEEIISARDYSLAQAAQPALGQTGFILTVILAAVATASGVLASVFAVSRMLAMLTDMEMIPHSHFG
MPGPIQRHTLVYTVVIAATLAVLFDLGRIASLGAFFYLVMDMIIHWGVFRYRRADVGAFGIVLLTALALDAIVLAAFTVM
KLQSDPMIVLYAAVGMIAVFAFERVYLSQWVAPQVAPAPAHAHGD

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786694, Length=384, Percent_Identity=29.1666666666667, Blast_Score=130, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24667468, Length=378, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 46486; Mature: 46486

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSEKETYRENSISLGGAVAMGTGVMIGAGIFALTGQIAQLAGPLFPLAFIAGAVVTSFS
CCCHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AYSYIRMSNKWPSSGGIAMILQKCYGPGAIAGGAALLMALSMVIAESLVARTFATYVLRP
HHHHEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FDIEGGPLVPALAVAVIVFAFLVNMAGNRSVGLFSLIMAAIKIGGIALFGIAALWSSGFA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FAAASETSQSYGLTGFIASTALAILAFKGFTTITNSGAEITEPNRNVGRAIMFSIGICVV
EEECCCCCCCCCHHHHHHHHHHHHHHHHCHHHEECCCCCCCCCCCHHHHHHHHHHHHHHH
VYLLVAYGVGSSLTIEEIISARDYSLAQAAQPALGQTGFILTVILAAVATASGVLASVFA
HHHHHHHCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSRMLAMLTDMEMIPHSHFGMPGPIQRHTLVYTVVIAATLAVLFDLGRIASLGAFFYLVM
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMIIHWGVFRYRRADVGAFGIVLLTALALDAIVLAAFTVMKLQSDPMIVLYAAVGMIAVF
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHH
AFERVYLSQWVAPQVAPAPAHAHGD
HHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQSEKETYRENSISLGGAVAMGTGVMIGAGIFALTGQIAQLAGPLFPLAFIAGAVVTSFS
CCCHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AYSYIRMSNKWPSSGGIAMILQKCYGPGAIAGGAALLMALSMVIAESLVARTFATYVLRP
HHHHEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FDIEGGPLVPALAVAVIVFAFLVNMAGNRSVGLFSLIMAAIKIGGIALFGIAALWSSGFA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FAAASETSQSYGLTGFIASTALAILAFKGFTTITNSGAEITEPNRNVGRAIMFSIGICVV
EEECCCCCCCCCHHHHHHHHHHHHHHHHCHHHEECCCCCCCCCCCHHHHHHHHHHHHHHH
VYLLVAYGVGSSLTIEEIISARDYSLAQAAQPALGQTGFILTVILAAVATASGVLASVFA
HHHHHHHCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSRMLAMLTDMEMIPHSHFGMPGPIQRHTLVYTVVIAATLAVLFDLGRIASLGAFFYLVM
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMIIHWGVFRYRRADVGAFGIVLLTALALDAIVLAAFTVMKLQSDPMIVLYAAVGMIAVF
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHH
AFERVYLSQWVAPQVAPAPAHAHGD
HHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]