Definition | Salinispora arenicola CNS-205 chromosome, complete genome. |
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Accession | NC_009953 |
Length | 5,786,361 |
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Identifier: 159037970
GI number:
Start: 2727669
End: 2730437
Strand: Direct
Name: Not Available
Synonym: Sare_2374
Alternate gene names: NA
Gene position: NA
Preceding gene: 159037968
Following gene: 159037972
Centisome position: NA
GC content: NA
Gene sequence:
>2769_bases ATGTCGAGCCCCGCCGAGCGGTACGCCGCGGCGCGCCGCCGGGCCGCGCAGGCCTCCCAGTTCCCGGTGTTGGACGAGTT CGCCCTCGATTTGGGCGTCGACCTCGACGACTTCCAGCGGGAGGCGTGTCAGGCGTTGGAGCGGGGCAGCGGGGTCCTGG TCTGTGCCCCGACCGGTGCCGGCAAGACGGTCGTCGGTGAGTTCGCGGTTCACCTGGCGTTGCGTGGTGGGACCTCGGCC CCTGCCCAACGCCGCAAGTGCTTCTACACCACCCCGATCAAGGCATTGTCAAACCAGAAGTACCACGATCTGGTGGACCG GCACGGTGCCGCGCAGGTCGGGCTGCTCACCGGCGACAACGCGATCAACGGCGATGCGCCCGTGGTGGTGATGACCACCG AGGTGCTGCGCAACATGCTCTACGCCGGCTCGGCGACGTTGGAAGGGCTGGCGTACGTGGTGATGGACGAGGTGCACTAC CTCGCCGACCGGTTCCGCGGCGGCGTGTGGGAGGAGGTGATCATCCACCTGCCCGCCTCGGTCACGCTGGTCTCGTTGTC GGCGACCGTGTCCAACGCGGAGGAGTTCGCCGACTGGCTGGTCACGGTGCGCGGGGAGACCGCGGTGGTGGTCAGCGAGC ACCGGCCGGTGCCGTTGTGGCAGCACATGCTGGTCGGTCGGCGGATGTTCGACCTGTTCCACGACGCCGACGCCGCCCGC AAGCACGACGTGCATCCGGAGCTGTTGCGCCACACCCGGGACACGTTGCGTCGCCTCGAGCCGGGGGAGGGACGAGGCGC CGGCCCGGGAGGTCGGCGTGGGCCGCGCTGGCGGGGCCCGATGCGTCCCGACATCGTTGACCGCCTCGATCGGGAGGGCC TGCTACCGGCGATCCTGTTCATCTTCAGTCGGGCTGGCTGCGACGCGGCGGTGCAGCAGTGTCTCGCCGCCGGGTTGCGG CTGACCGGCCCGGAGGAGCGGGCCGAGATCCGCCGGGTGGTGGAGAGCCGGATCACCGCGATTCCCGGCGAGGACCTGTC GGTGCTGGGCTACTGGGACTGGCTCGACGGGCTGGAGCGGGGCCTTGCCGCGCACCATGCCGGTATGTTGCCGGCGTTCA AGGAGGTCGTCGAGGAGCTGTTCGTCCGGGGCCTGGTGAAGGCGGTTTTCGCCACCGAGACACTCGCGTTGGGCATCAAC ATGCCGGCCCGCTGCGTGGTGTTGGAGCGCCTGGTGAAGTACAACGGCGAGGCGCACGTGGACCTGACGCCAGGTGAGTA CACGCAGCTCACCGGCCGTGCCGGCCGCCGCGGCATCGACGTGGAGGGGCACGCCGTGGTGGTGTGGTCCCCGGAGACCG ACCCGCGGCACGTGGCGGGCCTGGCCTCCACCCGTACGTACCCGCTGCGGTCGAGCTTCCGGCCGTCGTACAACATGGCC GTCAACCTGGTCGGCAGCGTGGGGGCGGAGCCGGCCCGGGCGCTGTTGGAGTCCTCGTTCGCGCAGTTCCAGGCGGACCG GTCGGTGGTCGGGCTGGCGCGACAGGTCCAGCGCAACTCCGAGACGATCGAGGCGTACAGCGCGGAGGCAGCCTGCCAGC ACGGCGACTTCGACGGCTACTTCGCGATCCGCGTGGCGATCGCCGACCGGGAACGGGCGTTGGCCCGGCAGGGGCAGAGC CAGCGTAGGGCGGCGGCGGTCGTCTCGTTGGAGCGGTTGCGGGTCGGTGACGTGATCCGGGTGCCGTCCGGCCGGCGAGC CGGGCTGGCGGTGGTGCTGGACCCGGCGACAGCTGGCTTCGGGGAACCTCGTCCGCTGGTCCTGACCCAGGACCGGTGGG CGGGTCGGGTCGGACCCGGCGACTTCACCACCCCAGCGGAGGTGCTTGCCCGGATCCGGGTTCCGAAGCACTTCAACCAC CGTTCCCCGGCCGCCCGACGGGACCTGGCCGCAGAGGTCAGCGGCACGGGGCTGGACCGGCACGGCGGCCGGCGGGGCGG CCGGTCGCGGCGTGGCGGCGGGGAGGACGACCGGCTCGTGCAGCTCCGCGCCGAGCTGCGCCGCCACCCGTGTCACGCCT GCCCGGAGCGGGAGGAACATGCTCGCTGGGCGGAGCGTCGCCGACGGCTGGAGAAGGACACCGAGGAGCTGCGGCAGCGG GTGGCGGGCCGCACCGGTTCGTTGGCTCGCACCTTTGACCGGATCGTGGCGCTGTTGACGGCCCGCGGCTACCTTGCGCC CGACGGGGCGGTCACCGAGGCCGGTCGGACGCTCAGCCGGATCTGGACGGAGGCGGACCTGCTGGTCGCGGAGTGCCTGC GTCGTGGGGTGTGGGGCGGGCTCAGCCCGGCCGAGCTGGCGGCGGCGGTGTCGGTGGTGGTCTTCGAGGCCCGTCGTGAC CTTGACGAGCGGGCGTCGCTGCCGCGGGGCGCGGTGGCGACGGCGGTGGACGAGACGTTGAAGCTCTGGGGAGAGATCGA GGCCGACGAGGCGGCTCGGGGGCTGGCCGTGACCCGGGAGCCGGATCTCGGTTTTGCCTGGCCGGTCTACCGTTGGGCAC GAGGGGAGCCGCTCGCGAAGGTACTCGTCAGCGGCCACGTGGACGGCGAGATGCCGGCCGGCGACTTCGTCCGCTGGGCG CGGCAGGTCGTGGACCTGCTGGGGCAGCTGGCCGATTCCGGCGGCGCCTCGGCCGAGCTGCGCAGCAACGCGCGGCAGGC CATCACCGCGGTGAACCGTGGGGTCCTCGCCTACCAGGCCACCGCCTGA
Upstream 100 bases:
>100_bases ACGGTCCGGCACGCCGTGAACCCTACCGACCGCCTCCGATGGGCCCGGACGCGACGGCCTCGTGGGGCGTCCCGGCGCGG TACGCACTAATCTTGGTCCC
Downstream 100 bases:
>100_bases CACCACTCGTCTCGACGCCGGAAAGCCGCACCGGTAGGACGTGCCGACCGGCTGTGGTGATCAATCGGTTCGGGCGGCCA GGGCATCGACCAGGCGCCGG
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>922_residues MSSPAERYAAARRRAAQASQFPVLDEFALDLGVDLDDFQREACQALERGSGVLVCAPTGAGKTVVGEFAVHLALRGGTSA PAQRRKCFYTTPIKALSNQKYHDLVDRHGAAQVGLLTGDNAINGDAPVVVMTTEVLRNMLYAGSATLEGLAYVVMDEVHY LADRFRGGVWEEVIIHLPASVTLVSLSATVSNAEEFADWLVTVRGETAVVVSEHRPVPLWQHMLVGRRMFDLFHDADAAR KHDVHPELLRHTRDTLRRLEPGEGRGAGPGGRRGPRWRGPMRPDIVDRLDREGLLPAILFIFSRAGCDAAVQQCLAAGLR LTGPEERAEIRRVVESRITAIPGEDLSVLGYWDWLDGLERGLAAHHAGMLPAFKEVVEELFVRGLVKAVFATETLALGIN MPARCVVLERLVKYNGEAHVDLTPGEYTQLTGRAGRRGIDVEGHAVVVWSPETDPRHVAGLASTRTYPLRSSFRPSYNMA VNLVGSVGAEPARALLESSFAQFQADRSVVGLARQVQRNSETIEAYSAEAACQHGDFDGYFAIRVAIADRERALARQGQS QRRAAAVVSLERLRVGDVIRVPSGRRAGLAVVLDPATAGFGEPRPLVLTQDRWAGRVGPGDFTTPAEVLARIRVPKHFNH RSPAARRDLAAEVSGTGLDRHGGRRGGRSRRGGGEDDRLVQLRAELRRHPCHACPEREEHARWAERRRRLEKDTEELRQR VAGRTGSLARTFDRIVALLTARGYLAPDGAVTEAGRTLSRIWTEADLLVAECLRRGVWGGLSPAELAAAVSVVVFEARRD LDERASLPRGAVATAVDETLKLWGEIEADEAARGLAVTREPDLGFAWPVYRWARGEPLAKVLVSGHVDGEMPAGDFVRWA RQVVDLLGQLADSGGASAELRSNARQAITAVNRGVLAYQATA
Sequences:
NA
Specific function: NA
COG id: COG4581
COG function: function code L; Superfamily II RNA helicase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA