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The map label for this gene is lrgB [H]

Identifier: 158423807

GI number: 158423807

Start: 2499521

End: 2500210

Strand: Direct

Name: lrgB [H]

Synonym: AZC_2183

Alternate gene names: 158423807

Gene position: 2499521-2500210 (Clockwise)

Preceding gene: 158423806

Following gene: 158423809

Centisome position: 46.55

GC content: 67.68

Gene sequence:

>690_bases
TTGCAGAGCCTTCTGGGCGCGCTGTTCTGGTCGCTGGTGACCATCGGCTGCTACGCGCTGGCGCGGCTCATCAATCAGAA
GGCGCGGGCCTGGTGGTCGTCGCCGCTGATGCTCACGCCGGTCGCCGTGGGCGCCATCGTTGTCCTGCTGCACACGGGCT
ATGCCTCCTACATCCAGGGCACGCACTGGCTGGCGCTGATGATGGGTCCGGCGACGGTTGCCTTCGCCATTCCGCTCTAT
GAACACCGCGCCACCATCCGCAAGCATTGGCCGGTGCTGCTGGCGGGCGTCGCCATCGGCAGCATCACCGCCATGGGAAC
GGCCTTTGCGCTCGCCTACTGGCTGGACATTCCTTCCGTGCTGCGGGCGAGCCTCATGCCCCGCTCCACCAGCACGCCCT
TCGCCATGGCGGCCTCCAGCGAGATCGGCGGCATGCCGGAACTGACCGCCGTCTTCGTCATCATCACCGGCGCGACCGGT
GCGGCGGTCGGCGAGACGTTGCTACGCTTCATGCCCGTCCGCTCCTCGCTGGCCCGTGGCGCCGTGCTCGGCATGGGCGC
CCATGGCGCAGGCGTCGCCAAGGCTCACCAGATGGGATCGGAAGAAGGGTCCATCGCCGGCCTCGTGATGATCCTCGCCG
GCTGCTTCAATCTGCTCATGGCGCCGATCGTGGCGATGGTCATGGGCTGA

Upstream 100 bases:

>100_bases
ATCGCCGCCGTGATCTTCGTCGGCACGGTCATGGTGATGGTGGTCACGGCCCTCACCGTGGACCTCTGCTACCGCTGGCA
GGCCCGTCATGCCTGATGCC

Downstream 100 bases:

>100_bases
GGCGCATCTCCGCGCCCGCCTGATCCCCGATCGGCAGAACCGCCCGCGCAGGTGCCGCTGCGCGGGCGGTTTCGTTTGTT
GCGTCTTGGGCTCAGGCCAC

Product: LrgB-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MQSLLGALFWSLVTIGCYALARLINQKARAWWSSPLMLTPVAVGAIVVLLHTGYASYIQGTHWLALMMGPATVAFAIPLY
EHRATIRKHWPVLLAGVAIGSITAMGTAFALAYWLDIPSVLRASLMPRSTSTPFAMAASSEIGGMPELTAVFVIITGATG
AAVGETLLRFMPVRSSLARGAVLGMGAHGAGVAKAHQMGSEEGSIAGLVMILAGCFNLLMAPIVAMVMG

Sequences:

>Translated_229_residues
MQSLLGALFWSLVTIGCYALARLINQKARAWWSSPLMLTPVAVGAIVVLLHTGYASYIQGTHWLALMMGPATVAFAIPLY
EHRATIRKHWPVLLAGVAIGSITAMGTAFALAYWLDIPSVLRASLMPRSTSTPFAMAASSEIGGMPELTAVFVIITGATG
AAVGETLLRFMPVRSSLARGAVLGMGAHGAGVAKAHQMGSEEGSIAGLVMILAGCFNLLMAPIVAMVMG
>Mature_229_residues
MQSLLGALFWSLVTIGCYALARLINQKARAWWSSPLMLTPVAVGAIVVLLHTGYASYIQGTHWLALMMGPATVAFAIPLY
EHRATIRKHWPVLLAGVAIGSITAMGTAFALAYWLDIPSVLRASLMPRSTSTPFAMAASSEIGGMPELTAVFVIITGATG
AAVGETLLRFMPVRSSLARGAVLGMGAHGAGVAKAHQMGSEEGSIAGLVMILAGCFNLLMAPIVAMVMG

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=231, Percent_Identity=34.1991341991342, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 23926; Mature: 23926

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLLGALFWSLVTIGCYALARLINQKARAWWSSPLMLTPVAVGAIVVLLHTGYASYIQG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCC
THWLALMMGPATVAFAIPLYEHRATIRKHWPVLLAGVAIGSITAMGTAFALAYWLDIPSV
CHHEEHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LRASLMPRSTSTPFAMAASSEIGGMPELTAVFVIITGATGAAVGETLLRFMPVRSSLARG
HHHHHCCCCCCCCEEEECCCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
AVLGMGAHGAGVAKAHQMGSEEGSIAGLVMILAGCFNLLMAPIVAMVMG
HHEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQSLLGALFWSLVTIGCYALARLINQKARAWWSSPLMLTPVAVGAIVVLLHTGYASYIQG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCC
THWLALMMGPATVAFAIPLYEHRATIRKHWPVLLAGVAIGSITAMGTAFALAYWLDIPSV
CHHEEHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LRASLMPRSTSTPFAMAASSEIGGMPELTAVFVIITGATGAAVGETLLRFMPVRSSLARG
HHHHHCCCCCCCCEEEECCCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
AVLGMGAHGAGVAKAHQMGSEEGSIAGLVMILAGCFNLLMAPIVAMVMG
HHEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]