Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423791
Identifier: 158423791
GI number: 158423791
Start: 2484608
End: 2485222
Strand: Direct
Name: 158423791
Synonym: AZC_2167
Alternate gene names: NA
Gene position: 2484608-2485222 (Clockwise)
Preceding gene: 158423790
Following gene: 158423792
Centisome position: 46.27
GC content: 69.27
Gene sequence:
>615_bases ATGGCCATCCGCAAGCCCATCGTCATCGTTGAGGGCCCGAAGACCGCGAACCTGCTGTCGGTGTGGGGCGATACGCTCAC CTCGGTGCGGATCCGCGATGCGGTGGGCCATGAGAGCGACACCTGCACGCTCACCTTCCGGGTGAGCCCGCCGTTCCCGG CCATGCCGCCCAGGGGCACCCGCTACACGGTGCGCATCGGCTGGGCGCAGAACGCCATGGCCAAGGTCGGCGTCTACACC GTCCAGCGCACCGGCCTTGCCGGCAATCCGGACGGCGGCCACCTGATGACGGTGGAGTGCCGGGCGGCCGATTTGATCGA GAAAGCCAAGTCCGTGGACAGCGGCCATTGGGACAACACCACCCTCGGCGCCATCGTCGCGGACGTGGCCAAGGGGCTGG GCCTCAAGGCTGCGGTGGATCCGAAGCTCAAGGGGATCAGGATCCCGTACCGCGCCCGCGTGAACCAGGAGGCCATGGAC TTCCTCTCCGACCTTGCGGACGACTTCGGGGCGGCGGTGAAGGTGGCCGGCGGGCAGATCGTCATGACCGAGCGCGGCGC CGGCCGCACCGCCTCGGGCGGCGCCTTGCCCGGTCTCACCATCCCCTATGCCTAG
Upstream 100 bases:
>100_bases CGCCCTCGGCCCGGTGGTGCCCGCCGGCACCCGCGTCACGGTGCCAGACCTGCCGGAGCCGGAGGCCAGCTCCGCCTTCG TGCGCGTGTGGGAATAGGCC
Downstream 100 bases:
>100_bases GCTTACGACTTCGCCTTCGACTTGGAGCCGCGCGGCGCCTACGCGACCAGCGAGGGCCGCTGGTATGACGAGGAGACCGG CACCTGGAAGGGCGAGGATG
Product: phage late control gene D protein
Products: NA
Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Phage Late Control Gene D Protein; Tail Protein D; Late Control Gene D Protein; Regulator Of Late Gene Expression; Pyocin R2_PP Tail Formation; Phage-Related Tail Protein; Phage Protein D; Phage Late Control D Protein; Pyocin R2_PP Tail Formation GPD; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Prophage Tail Protein; Bacteriophage Late Control D Protein; Prophage; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Late Control D Protein; Phage Regulator; Fels-2 Prophage Protein; Phage Protein D-Like; Phage Late Control; Regulator Of Late Phage Gene Expression; Phage Late Control Gene D Protein-Like Protein; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Bacteriophage Tail Protein D; Gene D Protein; Late Gene Regulator; Phage-Related Late Control Gene Protein; Phage Tail Protein D
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MAIRKPIVIVEGPKTANLLSVWGDTLTSVRIRDAVGHESDTCTLTFRVSPPFPAMPPRGTRYTVRIGWAQNAMAKVGVYT VQRTGLAGNPDGGHLMTVECRAADLIEKAKSVDSGHWDNTTLGAIVADVAKGLGLKAAVDPKLKGIRIPYRARVNQEAMD FLSDLADDFGAAVKVAGGQIVMTERGAGRTASGGALPGLTIPYA
Sequences:
>Translated_204_residues MAIRKPIVIVEGPKTANLLSVWGDTLTSVRIRDAVGHESDTCTLTFRVSPPFPAMPPRGTRYTVRIGWAQNAMAKVGVYT VQRTGLAGNPDGGHLMTVECRAADLIEKAKSVDSGHWDNTTLGAIVADVAKGLGLKAAVDPKLKGIRIPYRARVNQEAMD FLSDLADDFGAAVKVAGGQIVMTERGAGRTASGGALPGLTIPYA >Mature_203_residues AIRKPIVIVEGPKTANLLSVWGDTLTSVRIRDAVGHESDTCTLTFRVSPPFPAMPPRGTRYTVRIGWAQNAMAKVGVYTV QRTGLAGNPDGGHLMTVECRAADLIEKAKSVDSGHWDNTTLGAIVADVAKGLGLKAAVDPKLKGIRIPYRARVNQEAMDF LSDLADDFGAAVKVAGGQIVMTERGAGRTASGGALPGLTIPYA
Specific function: Unknown
COG id: COG3500
COG function: function code R; Phage protein D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21511; Mature: 21380
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRKPIVIVEGPKTANLLSVWGDTLTSVRIRDAVGHESDTCTLTFRVSPPFPAMPPRGT CCCCCCEEEEECCCCCHHHHHHCCHHHEEEEEHHCCCCCCEEEEEEEECCCCCCCCCCCC RYTVRIGWAQNAMAKVGVYTVQRTGLAGNPDGGHLMTVECRAADLIEKAKSVDSGHWDNT EEEEEEECCCCCHHHHEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCC TLGAIVADVAKGLGLKAAVDPKLKGIRIPYRARVNQEAMDFLSDLADDFGAAVKVAGGQI HHHHHHHHHHHCCCCEEECCCCCCCEECCHHHCCCHHHHHHHHHHHHHHCCEEEECCCEE VMTERGAGRTASGGALPGLTIPYA EEEECCCCCCCCCCCCCCEECCCC >Mature Secondary Structure AIRKPIVIVEGPKTANLLSVWGDTLTSVRIRDAVGHESDTCTLTFRVSPPFPAMPPRGT CCCCCEEEEECCCCCHHHHHHCCHHHEEEEEHHCCCCCCEEEEEEEECCCCCCCCCCCC RYTVRIGWAQNAMAKVGVYTVQRTGLAGNPDGGHLMTVECRAADLIEKAKSVDSGHWDNT EEEEEEECCCCCHHHHEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCC TLGAIVADVAKGLGLKAAVDPKLKGIRIPYRARVNQEAMDFLSDLADDFGAAVKVAGGQI HHHHHHHHHHHCCCCEEECCCCCCCEECCHHHCCCHHHHHHHHHHHHHHCCEEEECCCEE VMTERGAGRTASGGALPGLTIPYA EEEECCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA