Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423773
Identifier: 158423773
GI number: 158423773
Start: 2466913
End: 2467815
Strand: Direct
Name: 158423773
Synonym: AZC_2149
Alternate gene names: NA
Gene position: 2466913-2467815 (Clockwise)
Preceding gene: 158423772
Following gene: 158423774
Centisome position: 45.94
GC content: 67.22
Gene sequence:
>903_bases ATGCCCCGCGTCCTCACGCCCCCGCTGCTGGAAGCCATCAACAAGGGCTTCAAGACCAATTTCCAGAAGGGTTTTTCGGG CGTCACGGCGCTCTACTGGAACCTCTGCACCATCGTGCCCTCCACCTCCTCGGAGGAAACCTATGGCTGGCTCGGCGACA TCCCCAAGATGCGGGAGTGGATCGGCGACCGGCACGTGCACGGCCTGCGCGCCCATGGCTATGCCATCCGGAACCGCAAG TTCGAGCTGACGGTCTCCGTGCAGCGGGACGACATCGAGGACGACCGGCTCGGCATCTATGCCCCGCGCTTCGAGCTGCT GGGCCAGGCCGCCGCCGAGCATCCCGACGACCTCGTCTTCGGCGAGCTGATCCCCCAGGCCTGGACGCGCGCCTGCTATG ACGGCCAGCCCTTCTTCGACACCGACCATCCGGTGGGCCTGCCGGGTGCGCAGGCGACCGTCTCCAACATGCAGGCGGGG ACGGGCGAGCCCTGGATGCTGCTGGACCTCAGCCGGCCGCTGAAGCCCTTCATCTTCCAGAAGCGCCGCGACTACAATTT CGTGGCCAAGGAGGACGCCAAGACCAGCGACCGCGTCTTCGAGCGCGACGAATATGTCTATGGCTCGGATGCCCGCGTGG GCGCCGGCTACGGCTTCTGGCAGATGGCCTTCGGCTCGCGGGCCGAGCTGACGGCGGCCAACCTGCGCGCCGCCTGGAAC GCCATCACCGCCTTCAGGAGCGACAACGGCACGCCGCTCGGCGTCACGCCCACGCACCTGGTGGTGGGCAACACCAACTT CTTCACCGCCAAGGACATCCTGGAGCGCGACGTGATCGACGGCTCCACCAACACCAACCGCAACCTCGTGACGCTCCTGC GGGCGCCGAAGCTCGCGGCCTGA
Upstream 100 bases:
>100_bases CGCGGTCCGAAGCCGGCACGGTGATCGACGTGGACGCCCAGGGCGTCTGGGTCCGCCTCGGCTTCTGATCCTCCTCTCTC CTCCATCCGCGAGACGTCTC
Downstream 100 bases:
>100_bases GGAGAGGCGTGATGGCGAAAGCTCCTGCCACTTCCACCGCTCCCGAGGCGACCGAGCCCTGCCTTCGGATCACGGCGCCC GGCGGCTCCCGCTGGCGGGC
Product: Mu-like prophage major head subunit gpT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MPRVLTPPLLEAINKGFKTNFQKGFSGVTALYWNLCTIVPSTSSEETYGWLGDIPKMREWIGDRHVHGLRAHGYAIRNRK FELTVSVQRDDIEDDRLGIYAPRFELLGQAAAEHPDDLVFGELIPQAWTRACYDGQPFFDTDHPVGLPGAQATVSNMQAG TGEPWMLLDLSRPLKPFIFQKRRDYNFVAKEDAKTSDRVFERDEYVYGSDARVGAGYGFWQMAFGSRAELTAANLRAAWN AITAFRSDNGTPLGVTPTHLVVGNTNFFTAKDILERDVIDGSTNTNRNLVTLLRAPKLAA
Sequences:
>Translated_300_residues MPRVLTPPLLEAINKGFKTNFQKGFSGVTALYWNLCTIVPSTSSEETYGWLGDIPKMREWIGDRHVHGLRAHGYAIRNRK FELTVSVQRDDIEDDRLGIYAPRFELLGQAAAEHPDDLVFGELIPQAWTRACYDGQPFFDTDHPVGLPGAQATVSNMQAG TGEPWMLLDLSRPLKPFIFQKRRDYNFVAKEDAKTSDRVFERDEYVYGSDARVGAGYGFWQMAFGSRAELTAANLRAAWN AITAFRSDNGTPLGVTPTHLVVGNTNFFTAKDILERDVIDGSTNTNRNLVTLLRAPKLAA >Mature_299_residues PRVLTPPLLEAINKGFKTNFQKGFSGVTALYWNLCTIVPSTSSEETYGWLGDIPKMREWIGDRHVHGLRAHGYAIRNRKF ELTVSVQRDDIEDDRLGIYAPRFELLGQAAAEHPDDLVFGELIPQAWTRACYDGQPFFDTDHPVGLPGAQATVSNMQAGT GEPWMLLDLSRPLKPFIFQKRRDYNFVAKEDAKTSDRVFERDEYVYGSDARVGAGYGFWQMAFGSRAELTAANLRAAWNA ITAFRSDNGTPLGVTPTHLVVGNTNFFTAKDILERDVIDGSTNTNRNLVTLLRAPKLAA
Specific function: Unknown
COG id: COG4397
COG function: function code R; Mu-like prophage major head subunit gpT
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein T [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018774 [H]
Pfam domain/function: PF10124 Mu-like_gpT [H]
EC number: NA
Molecular weight: Translated: 33533; Mature: 33402
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRVLTPPLLEAINKGFKTNFQKGFSGVTALYWNLCTIVPSTSSEETYGWLGDIPKMREW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHH IGDRHVHGLRAHGYAIRNRKFELTVSVQRDDIEDDRLGIYAPRFELLGQAAAEHPDDLVF HCCCCCCCHHHCCEEEECCEEEEEEEEECCCCCCCCEEEECCHHHHHHHHHHCCCCCHHH GELIPQAWTRACYDGQPFFDTDHPVGLPGAQATVSNMQAGTGEPWMLLDLSRPLKPFIFQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCHHHHHH KRRDYNFVAKEDAKTSDRVFERDEYVYGSDARVGAGYGFWQMAFGSRAELTAANLRAAWN HCCCCCEEECCCCCCHHHHHHCCCEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHH AITAFRSDNGTPLGVTPTHLVVGNTNFFTAKDILERDVIDGSTNTNRNLVTLLRAPKLAA HHHHEECCCCCCCCCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure PRVLTPPLLEAINKGFKTNFQKGFSGVTALYWNLCTIVPSTSSEETYGWLGDIPKMREW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHH IGDRHVHGLRAHGYAIRNRKFELTVSVQRDDIEDDRLGIYAPRFELLGQAAAEHPDDLVF HCCCCCCCHHHCCEEEECCEEEEEEEEECCCCCCCCEEEECCHHHHHHHHHHCCCCCHHH GELIPQAWTRACYDGQPFFDTDHPVGLPGAQATVSNMQAGTGEPWMLLDLSRPLKPFIFQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCHHHHHH KRRDYNFVAKEDAKTSDRVFERDEYVYGSDARVGAGYGFWQMAFGSRAELTAANLRAAWN HCCCCCEEECCCCCCHHHHHHCCCEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHH AITAFRSDNGTPLGVTPTHLVVGNTNFFTAKDILERDVIDGSTNTNRNLVTLLRAPKLAA HHHHEECCCCCCCCCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]