Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423753
Identifier: 158423753
GI number: 158423753
Start: 2445751
End: 2446518
Strand: Direct
Name: 158423753
Synonym: AZC_2129
Alternate gene names: NA
Gene position: 2445751-2446518 (Clockwise)
Preceding gene: 158423752
Following gene: 158423754
Centisome position: 45.55
GC content: 68.88
Gene sequence:
>768_bases TTGAGAATGTTGCAGGCAGGTTTGACGGTTAAGGGGCCGGTTGCCACGGCCAATGTGGCGGCCTTCATGGGGCTCGCCAC CAAGCTCATCGAGCGCGATCCCACCGCGCCCGGCATCGGCGTCTTCCACGGCCCCTCGGGCTACGGGAAGACCTATGCCA GCATCTTCGCGCAGAACCGCACCCGCGCCATCCGCGTCGAGGTGGGCGATTACTGGACGCGCAAGACGCTTCTTAAATCC GTCCTCGCGGAAGCCGGCCTCCAGGCGCGCGGCACCATCGCCGACATGGCGGAGGCAGTCATCCGCATCCTGGGGGATGA TCCCCACCGCCCGCTCATCATCGACGAGGCCGACCGGCTCGTGGACAAGCGCATGATCGAGCTGGTGCGCGACCTGCAGG ACAAGAGCACCGCGCCCATCATCCTCATCGGCGAGGAGCACCTGCCCACCAAGCTCGCCACGGTGGAGCGCGTGCACAAC CGGGTGCTGGACTGGGTCGCCGCCGAGCCGACCGACCTTGAGGACGCCCGCGCGCTCGCCGCCTCGCTGTGCCCGCGCCT CACGCTGGAGGATGATCTCCTCGCCGAGATCGTGAACCGCTCGGACGGGCGGGCGCGGCGCATCGTGGTCAACCTCATCC GGGCCTCGGAGATCGCCCGCAACCTCGGCGTCATGCGGCTCGACCGCGCGGCCTGGGGCAATAACGGCTTCTTCGACAGC CGGCCGCCGTCGCCCCGCAACATCGCCGCGCTCGCGAGGGGGATGTGA
Upstream 100 bases:
>100_bases AATACAAGGGTTTCAAGCTCACCTTCGGAGACAGCCATGACGTAGCGCCCCGCCAGGCGCCGGTGGAAGCCGGCTGAACA CGTTCGAGCATTGGGGATTT
Downstream 100 bases:
>100_bases GATGGCGCGCCGTCCCACCCCCGATCATGTGAGCCTGACCGTGCGCGTCCCGCGCGGCCATGAAGGCTTCTGGCGCATCA TCCGCGACCTCGACGAGGCT
Product: transposase B
Products: NA
Alternate protein names: Prophage MuSo1 DNA Transposition Protein; Bacteriophage DNA Transposition B Protein; Prophage; DNA Transposition Protein; AAA ATPase Family Protein; Phage Transposition Protein B; AAA ATPase; B Protein
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MRMLQAGLTVKGPVATANVAAFMGLATKLIERDPTAPGIGVFHGPSGYGKTYASIFAQNRTRAIRVEVGDYWTRKTLLKS VLAEAGLQARGTIADMAEAVIRILGDDPHRPLIIDEADRLVDKRMIELVRDLQDKSTAPIILIGEEHLPTKLATVERVHN RVLDWVAAEPTDLEDARALAASLCPRLTLEDDLLAEIVNRSDGRARRIVVNLIRASEIARNLGVMRLDRAAWGNNGFFDS RPPSPRNIAALARGM
Sequences:
>Translated_255_residues MRMLQAGLTVKGPVATANVAAFMGLATKLIERDPTAPGIGVFHGPSGYGKTYASIFAQNRTRAIRVEVGDYWTRKTLLKS VLAEAGLQARGTIADMAEAVIRILGDDPHRPLIIDEADRLVDKRMIELVRDLQDKSTAPIILIGEEHLPTKLATVERVHN RVLDWVAAEPTDLEDARALAASLCPRLTLEDDLLAEIVNRSDGRARRIVVNLIRASEIARNLGVMRLDRAAWGNNGFFDS RPPSPRNIAALARGM >Mature_255_residues MRMLQAGLTVKGPVATANVAAFMGLATKLIERDPTAPGIGVFHGPSGYGKTYASIFAQNRTRAIRVEVGDYWTRKTLLKS VLAEAGLQARGTIADMAEAVIRILGDDPHRPLIIDEADRLVDKRMIELVRDLQDKSTAPIILIGEEHLPTKLATVERVHN RVLDWVAAEPTDLEDARALAASLCPRLTLEDDLLAEIVNRSDGRARRIVVNLIRASEIARNLGVMRLDRAAWGNNGFFDS RPPSPRNIAALARGM
Specific function: Unknown
COG id: COG2842
COG function: function code R; Uncharacterized ATPase, putative transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27929; Mature: 27929
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMLQAGLTVKGPVATANVAAFMGLATKLIERDPTAPGIGVFHGPSGYGKTYASIFAQNR CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCC TRAIRVEVGDYWTRKTLLKSVLAEAGLQARGTIADMAEAVIRILGDDPHRPLIIDEADRL CEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECHHHHH VDKRMIELVRDLQDKSTAPIILIGEEHLPTKLATVERVHNRVLDWVAAEPTDLEDARALA HHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ASLCPRLTLEDDLLAEIVNRSDGRARRIVVNLIRASEIARNLGVMRLDRAAWGNNGFFDS HHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCCCCCC RPPSPRNIAALARGM CCCCCHHHHHHHCCC >Mature Secondary Structure MRMLQAGLTVKGPVATANVAAFMGLATKLIERDPTAPGIGVFHGPSGYGKTYASIFAQNR CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCC TRAIRVEVGDYWTRKTLLKSVLAEAGLQARGTIADMAEAVIRILGDDPHRPLIIDEADRL CEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECHHHHH VDKRMIELVRDLQDKSTAPIILIGEEHLPTKLATVERVHNRVLDWVAAEPTDLEDARALA HHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ASLCPRLTLEDDLLAEIVNRSDGRARRIVVNLIRASEIARNLGVMRLDRAAWGNNGFFDS HHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCCCCCC RPPSPRNIAALARGM CCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA