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The map label for this gene is dppB [H]

Identifier: 158423670

GI number: 158423670

Start: 2359324

End: 2360301

Strand: Direct

Name: dppB [H]

Synonym: AZC_2046

Alternate gene names: 158423670

Gene position: 2359324-2360301 (Clockwise)

Preceding gene: 158423669

Following gene: 158423671

Centisome position: 43.94

GC content: 66.77

Gene sequence:

>978_bases
ATGCAGACCCTGCAGTTTCTCCTTTGGCGGCTGGCCAAGGGCATCCTTGTGGTGCTCGCCATCGTCATTCTTGATTTCTT
TCTCATCCACATGGCGCCGGGCGATCCGGCTTCCGTGATGGCCGGCGAGTCCGGCGCCACCGACGAGGCCTTCGTCCAGC
AACTGCGGGTGAAGTTCGGGCTGGATCAGCCGCTCACCACGCAGCTCGGCCTCTATCTGTGGGGCGTCGTGCGGCTTGAT
CTCGGCTTCTCGCACCGCCAGCAGATGCCGGTGCTGGATCTGGTGCTCGACCGCCTGCCGGCGACCCTGCTGCTCACCGG
CGCGGCCTTCGTCTTCTCGCTCACGCTCGGCGTCGTCCTCGGCGCGTGGGCGGCGGCCCACAAGGGGCGTCCCCTGGATC
GCATCATCACCACCGTTTCGCTGGTGTTCTATGCCGCGCCGCTATTCTGGATGGCGCTCATGGCCGTGCTCATCTTCTCC
GTCTGGCTCGACTGGCTGCCGGCCTTCGGCATCCGTGATGTGGGCGGCGACGCCGGCCTGCTCGACCGGACGCTCGACGT
GGCGCGCCATCTGGTGCTGCCGGCGGTGACGCTCGGCCTCTTCTTCACTGCGGTCTATGTGCGCATGACGCGGGCTTCCA
TGATCGAGGTGGCGCGGCAGGATTTCGTGAAGACCTGCCGGGCCAAGGGCCTGCCCGAGCGCGTGATCCTGCGCCGGCAC
GTGCTGCGCAACGCGGTGCTCCCCGTCGTCACCCTCGCCGGTCTTCAGGCCGGACAGATGGTGGGCGGCGCGGTGATGAC
AGAGACGGTGTTCGCCTGGCCGGGCATCGGCCGCCTCATGTACGAGGCGCTGATCCAGCGCGACTACAACCTGCTGCTCG
GCGTCTTCGTGGTCTCTGCCGCCATGGTGGTGGTGTTCAACATCCTGACCGATCTCGTCTACCGCATGGTGGACCCGCGC
ATCGAGGTGTCGCGATGA

Upstream 100 bases:

>100_bases
CGAGTGATCCGCCAGCCCCGAAACGGGCTTCGCGCAGCGCACCCGGGCGGCGGTTCCCCCTCCGCCGCCCCGTCGTTTCC
GCCGACGAGATCCGCCCTAC

Downstream 100 bases:

>100_bases
AGGGCTTCTGGTCCCGCTTCTGCCGGCACAAGGCTGCCGTCGCCGGGCTTGTCGTGGTGGTGCTGCTGGTCGCCGTCGCG
CTCGCCGCGCCCTATCTCTA

Product: ABC transporter permease

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MQTLQFLLWRLAKGILVVLAIVILDFFLIHMAPGDPASVMAGESGATDEAFVQQLRVKFGLDQPLTTQLGLYLWGVVRLD
LGFSHRQQMPVLDLVLDRLPATLLLTGAAFVFSLTLGVVLGAWAAAHKGRPLDRIITTVSLVFYAAPLFWMALMAVLIFS
VWLDWLPAFGIRDVGGDAGLLDRTLDVARHLVLPAVTLGLFFTAVYVRMTRASMIEVARQDFVKTCRAKGLPERVILRRH
VLRNAVLPVVTLAGLQAGQMVGGAVMTETVFAWPGIGRLMYEALIQRDYNLLLGVFVVSAAMVVVFNILTDLVYRMVDPR
IEVSR

Sequences:

>Translated_325_residues
MQTLQFLLWRLAKGILVVLAIVILDFFLIHMAPGDPASVMAGESGATDEAFVQQLRVKFGLDQPLTTQLGLYLWGVVRLD
LGFSHRQQMPVLDLVLDRLPATLLLTGAAFVFSLTLGVVLGAWAAAHKGRPLDRIITTVSLVFYAAPLFWMALMAVLIFS
VWLDWLPAFGIRDVGGDAGLLDRTLDVARHLVLPAVTLGLFFTAVYVRMTRASMIEVARQDFVKTCRAKGLPERVILRRH
VLRNAVLPVVTLAGLQAGQMVGGAVMTETVFAWPGIGRLMYEALIQRDYNLLLGVFVVSAAMVVVFNILTDLVYRMVDPR
IEVSR
>Mature_325_residues
MQTLQFLLWRLAKGILVVLAIVILDFFLIHMAPGDPASVMAGESGATDEAFVQQLRVKFGLDQPLTTQLGLYLWGVVRLD
LGFSHRQQMPVLDLVLDRLPATLLLTGAAFVFSLTLGVVLGAWAAAHKGRPLDRIITTVSLVFYAAPLFWMALMAVLIFS
VWLDWLPAFGIRDVGGDAGLLDRTLDVARHLVLPAVTLGLFFTAVYVRMTRASMIEVARQDFVKTCRAKGLPERVILRRH
VLRNAVLPVVTLAGLQAGQMVGGAVMTETVFAWPGIGRLMYEALIQRDYNLLLGVFVVSAAMVVVFNILTDLVYRMVDPR
IEVSR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=339, Percent_Identity=39.2330383480826, Blast_Score=235, Evalue=3e-63,
Organism=Escherichia coli, GI1789888, Length=320, Percent_Identity=38.125, Blast_Score=211, Evalue=4e-56,
Organism=Escherichia coli, GI1787053, Length=319, Percent_Identity=34.4827586206897, Blast_Score=195, Evalue=3e-51,
Organism=Escherichia coli, GI1787497, Length=321, Percent_Identity=33.3333333333333, Blast_Score=175, Evalue=4e-45,
Organism=Escherichia coli, GI1787761, Length=322, Percent_Identity=35.0931677018634, Blast_Score=160, Evalue=8e-41,
Organism=Escherichia coli, GI1787550, Length=262, Percent_Identity=33.969465648855, Blast_Score=154, Evalue=7e-39,
Organism=Escherichia coli, GI1788504, Length=361, Percent_Identity=27.7008310249307, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35872; Mature: 35872

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLQFLLWRLAKGILVVLAIVILDFFLIHMAPGDPASVMAGESGATDEAFVQQLRVKFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHC
LDQPLTTQLGLYLWGVVRLDLGFSHRQQMPVLDLVLDRLPATLLLTGAAFVFSLTLGVVL
CCCCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAWAAAHKGRPLDRIITTVSLVFYAAPLFWMALMAVLIFSVWLDWLPAFGIRDVGGDAGL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
LDRTLDVARHLVLPAVTLGLFFTAVYVRMTRASMIEVARQDFVKTCRAKGLPERVILRRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VLRNAVLPVVTLAGLQAGQMVGGAVMTETVFAWPGIGRLMYEALIQRDYNLLLGVFVVSA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMVVVFNILTDLVYRMVDPRIEVSR
HHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQTLQFLLWRLAKGILVVLAIVILDFFLIHMAPGDPASVMAGESGATDEAFVQQLRVKFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHC
LDQPLTTQLGLYLWGVVRLDLGFSHRQQMPVLDLVLDRLPATLLLTGAAFVFSLTLGVVL
CCCCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAWAAAHKGRPLDRIITTVSLVFYAAPLFWMALMAVLIFSVWLDWLPAFGIRDVGGDAGL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
LDRTLDVARHLVLPAVTLGLFFTAVYVRMTRASMIEVARQDFVKTCRAKGLPERVILRRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VLRNAVLPVVTLAGLQAGQMVGGAVMTETVFAWPGIGRLMYEALIQRDYNLLLGVFVVSA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMVVVFNILTDLVYRMVDPRIEVSR
HHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]