Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423666
Identifier: 158423666
GI number: 158423666
Start: 2354593
End: 2356002
Strand: Direct
Name: 158423666
Synonym: AZC_2042
Alternate gene names: NA
Gene position: 2354593-2356002 (Clockwise)
Preceding gene: 158423663
Following gene: 158423668
Centisome position: 43.85
GC content: 71.06
Gene sequence:
>1410_bases ATGGCCGGGCTTTCTTCGTTTCTCGCCAAGGATGAAGGACCGCAGGTGGCGGCCCTCACGCAGGCTTTTGCGCGCCGCAC ACTGTCCCCCGTGGAAGTGACGGAGGCCGCCCTCGCGCGCGCCGAAGAGATCAACCCGGCGCTCAATGCATTCCTGTCCA TCGATCATGAGCGCGCGCTTGCCGCTGCGCGGGCGGCGGAAGCGCGCTGGGCCAACGGGACGGCGCTCTCGCCCATCGAT GGCATTCCGACGACCCTCAAGGACATCGTGTGGGTGAAGGACTGGTCGGTCCGCTACGGCAGCGGCACGACGCCCGCCCA GCCCTATGCCGAGGATGCGCCCTCCGTTCGGCGCCTGCGCAGCGCCGGCGCGGTCTTCATCGGCCTTACCTCCTCGCCTG AGTTCGGCTGGAAGGCGGTGACGGACAGCCCCGCCTGCGGCATCACGCGCAATCCCCATGATCCCAGCCGCACGCCGGGC GGGTCCTCCGGCGGTGCGGCGGTCGCGGCCGCTGCGGGAGCGGGCGTGCTCCATCTCGGCACCGACGGAGGCGGCTCGAT CCGCGTCCCCTCGGCCTTTTCAGGTATCGCCGGCCTGAAGCCGACGTTCGGCCGCGTTCCCGCTTTCCCCGCGAGCGCCT TCGGCACCGTGGCCCATATCGGTCCCATGGCTCGCCACGCCGCAGACCTCGCCCCCATGCTGGCGGCCATGTCGGGCCGT GATCTTGCAGACTGGGCGCAGGGAGCGGGCGCGCTGGCGCCGCTGGGCACGCGCCTTCATCCGGATTTTCCGAAGGGAGC GCGCATCGGCGTCTGGTCCACGCCCCCTTGTGGCGCCGTGGATGCCCCGGTGGCCGTGGCCTTCCAGGCCGCGCTGAAGG TGCTGGAGGCGCAGGGAGCGATTCTGGAGCCCATCGACCTGCCGCGGGCCGATCGGGTGACCGGCGTGTTCGAGGCCCAT TGGTACGGCGGGGCCGCGGCCCGCCTTGCAGCCATTCCAGAGGACGATCGTGGCGGCATCGACCCCGGGTTCCTGGAGAT CGCGGCGGAGGGCGCGCGTCAGTCGGCCATCGATCTGATGCGGGCACAGGCGGAGCGCGGGGCCTTCGGTGCCGCCATGG ATGCCCTGCTCGAGTCCTACGACTTCATCGTCTCGCCGGGCGTCGCGGTGCTTCCGTTCAGCGCCGGGGCGCTGGTGCCA GAGGGGAGCGGATTGAAGCGCTGGCATCTGTGGGCCGGCTTCAGTTTCCCCATCAATCTCAGCCAGCAGCCGGCCGCGGT CGTGCCGCTGGCGTCCACGGCGGAGGGACTTCCGCGCTCCTTCCAGATTGTTGGCGCCCGCGGCGCGGACGGAGCGGTGC TGGCTGCAGCCGAGGCGCTGGAGCCGCTGCTCAAGGATGCCGGGCGATGA
Upstream 100 bases:
>100_bases GTTCTCCGAATAATACATTTTGTGGGAGGCCTCGGGAAGGTCATTCTGCCTTTCAAAGGTGCAGCGGAAATTTTGCTGCA TTTGCGAGCAGGGGTTGCGT
Downstream 100 bases:
>100_bases GCGGCCTCAGCCTTTCGATTCTTCGCTCTCGCGGGCGGCAAGGAGCTTGACCACATGCGCGCGCGCTACACCGATATGAT GGTCGATGGCCGCGCACCAG
Product: amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MAGLSSFLAKDEGPQVAALTQAFARRTLSPVEVTEAALARAEEINPALNAFLSIDHERALAAARAAEARWANGTALSPID GIPTTLKDIVWVKDWSVRYGSGTTPAQPYAEDAPSVRRLRSAGAVFIGLTSSPEFGWKAVTDSPACGITRNPHDPSRTPG GSSGGAAVAAAAGAGVLHLGTDGGGSIRVPSAFSGIAGLKPTFGRVPAFPASAFGTVAHIGPMARHAADLAPMLAAMSGR DLADWAQGAGALAPLGTRLHPDFPKGARIGVWSTPPCGAVDAPVAVAFQAALKVLEAQGAILEPIDLPRADRVTGVFEAH WYGGAAARLAAIPEDDRGGIDPGFLEIAAEGARQSAIDLMRAQAERGAFGAAMDALLESYDFIVSPGVAVLPFSAGALVP EGSGLKRWHLWAGFSFPINLSQQPAAVVPLASTAEGLPRSFQIVGARGADGAVLAAAEALEPLLKDAGR
Sequences:
>Translated_469_residues MAGLSSFLAKDEGPQVAALTQAFARRTLSPVEVTEAALARAEEINPALNAFLSIDHERALAAARAAEARWANGTALSPID GIPTTLKDIVWVKDWSVRYGSGTTPAQPYAEDAPSVRRLRSAGAVFIGLTSSPEFGWKAVTDSPACGITRNPHDPSRTPG GSSGGAAVAAAAGAGVLHLGTDGGGSIRVPSAFSGIAGLKPTFGRVPAFPASAFGTVAHIGPMARHAADLAPMLAAMSGR DLADWAQGAGALAPLGTRLHPDFPKGARIGVWSTPPCGAVDAPVAVAFQAALKVLEAQGAILEPIDLPRADRVTGVFEAH WYGGAAARLAAIPEDDRGGIDPGFLEIAAEGARQSAIDLMRAQAERGAFGAAMDALLESYDFIVSPGVAVLPFSAGALVP EGSGLKRWHLWAGFSFPINLSQQPAAVVPLASTAEGLPRSFQIVGARGADGAVLAAAEALEPLLKDAGR >Mature_468_residues AGLSSFLAKDEGPQVAALTQAFARRTLSPVEVTEAALARAEEINPALNAFLSIDHERALAAARAAEARWANGTALSPIDG IPTTLKDIVWVKDWSVRYGSGTTPAQPYAEDAPSVRRLRSAGAVFIGLTSSPEFGWKAVTDSPACGITRNPHDPSRTPGG SSGGAAVAAAAGAGVLHLGTDGGGSIRVPSAFSGIAGLKPTFGRVPAFPASAFGTVAHIGPMARHAADLAPMLAAMSGRD LADWAQGAGALAPLGTRLHPDFPKGARIGVWSTPPCGAVDAPVAVAFQAALKVLEAQGAILEPIDLPRADRVTGVFEAHW YGGAAARLAAIPEDDRGGIDPGFLEIAAEGARQSAIDLMRAQAERGAFGAAMDALLESYDFIVSPGVAVLPFSAGALVPE GSGLKRWHLWAGFSFPINLSQQPAAVVPLASTAEGLPRSFQIVGARGADGAVLAAAEALEPLLKDAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amidase family [H]
Homologues:
Organism=Homo sapiens, GI195972892, Length=239, Percent_Identity=32.6359832635983, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI222831590, Length=505, Percent_Identity=23.5643564356436, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17537465, Length=480, Percent_Identity=25.8333333333333, Blast_Score=125, Evalue=6e-29, Organism=Caenorhabditis elegans, GI17556264, Length=245, Percent_Identity=30.6122448979592, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17556278, Length=191, Percent_Identity=34.0314136125654, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17556276, Length=191, Percent_Identity=34.0314136125654, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17538252, Length=190, Percent_Identity=31.5789473684211, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI71990152, Length=330, Percent_Identity=27.2727272727273, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17543272, Length=130, Percent_Identity=38.4615384615385, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17538254, Length=258, Percent_Identity=27.906976744186, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320448, Length=280, Percent_Identity=33.9285714285714, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6319685, Length=433, Percent_Identity=25.4041570438799, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI45550774, Length=233, Percent_Identity=36.0515021459227, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI24648435, Length=233, Percent_Identity=36.0515021459227, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24648437, Length=233, Percent_Identity=36.0515021459227, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24644968, Length=483, Percent_Identity=26.5010351966874, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI24652985, Length=240, Percent_Identity=34.5833333333333, Blast_Score=115, Evalue=6e-26, Organism=Drosophila melanogaster, GI19922090, Length=240, Percent_Identity=34.5833333333333, Blast_Score=115, Evalue=6e-26, Organism=Drosophila melanogaster, GI24652981, Length=240, Percent_Identity=34.5833333333333, Blast_Score=115, Evalue=6e-26, Organism=Drosophila melanogaster, GI24652983, Length=240, Percent_Identity=34.5833333333333, Blast_Score=115, Evalue=6e-26, Organism=Drosophila melanogaster, GI24648441, Length=169, Percent_Identity=39.0532544378698, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24648439, Length=169, Percent_Identity=39.0532544378698, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI21356731, Length=475, Percent_Identity=26.7368421052632, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI161078093, Length=241, Percent_Identity=32.3651452282158, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24648113, Length=314, Percent_Identity=32.1656050955414, Blast_Score=94, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000120 - InterPro: IPR020556 [H]
Pfam domain/function: PF01425 Amidase [H]
EC number: =3.5.1.4 [H]
Molecular weight: Translated: 47923; Mature: 47791
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLSSFLAKDEGPQVAALTQAFARRTLSPVEVTEAALARAEEINPALNAFLSIDHERAL CCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHH AAARAAEARWANGTALSPIDGIPTTLKDIVWVKDWSVRYGSGTTPAQPYAEDAPSVRRLR HHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEEEECCEEECCCCCCCCCCCCCCHHHHHHH SAGAVFIGLTSSPEFGWKAVTDSPACGITRNPHDPSRTPGGSSGGAAVAAAAGAGVLHLG HCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHCCCCEEEEE TDGGGSIRVPSAFSGIAGLKPTFGRVPAFPASAFGTVAHIGPMARHAADLAPMLAAMSGR CCCCCCEECCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DLADWAQGAGALAPLGTRLHPDFPKGARIGVWSTPPCGAVDAPVAVAFQAALKVLEAQGA CHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC ILEPIDLPRADRVTGVFEAHWYGGAAARLAAIPEDDRGGIDPGFLEIAAEGARQSAIDLM EECCCCCCCCCCCCEEEEECCCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH RAQAERGAFGAAMDALLESYDFIVSPGVAVLPFSAGALVPEGSGLKRWHLWAGFSFPINL HHHHHCCCHHHHHHHHHHHCCHHCCCCCEEEECCCCCCCCCCCCCCEEEEEECEECCCCC SQQPAAVVPLASTAEGLPRSFQIVGARGADGAVLAAAEALEPLLKDAGR CCCCCEEEECHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGLSSFLAKDEGPQVAALTQAFARRTLSPVEVTEAALARAEEINPALNAFLSIDHERAL CCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHH AAARAAEARWANGTALSPIDGIPTTLKDIVWVKDWSVRYGSGTTPAQPYAEDAPSVRRLR HHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEEEECCEEECCCCCCCCCCCCCCHHHHHHH SAGAVFIGLTSSPEFGWKAVTDSPACGITRNPHDPSRTPGGSSGGAAVAAAAGAGVLHLG HCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHCCCCEEEEE TDGGGSIRVPSAFSGIAGLKPTFGRVPAFPASAFGTVAHIGPMARHAADLAPMLAAMSGR CCCCCCEECCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DLADWAQGAGALAPLGTRLHPDFPKGARIGVWSTPPCGAVDAPVAVAFQAALKVLEAQGA CHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC ILEPIDLPRADRVTGVFEAHWYGGAAARLAAIPEDDRGGIDPGFLEIAAEGARQSAIDLM EECCCCCCCCCCCCEEEEECCCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH RAQAERGAFGAAMDALLESYDFIVSPGVAVLPFSAGALVPEGSGLKRWHLWAGFSFPINL HHHHHCCCHHHHHHHHHHHCCHHCCCCCEEEECCCCCCCCCCCCCCEEEEEECEECCCCC SQQPAAVVPLASTAEGLPRSFQIVGARGADGAVLAAAEALEPLLKDAGR CCCCCEEEECHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]