Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is ordL [H]
Identifier: 158423658
GI number: 158423658
Start: 2345933
End: 2347213
Strand: Direct
Name: ordL [H]
Synonym: AZC_2034
Alternate gene names: 158423658
Gene position: 2345933-2347213 (Clockwise)
Preceding gene: 158423657
Following gene: 158423663
Centisome position: 43.69
GC content: 67.84
Gene sequence:
>1281_bases ATGCGCTTCACATCCTATTGGGCCGACACCGCGCCGGCGTTCACGGGCGGGACGCCCGGCTCCGTTGAAGGCGCCTATGA CGTCGCCATCGTGGGCGGCGGCTTCACCGGCCTTGAAGCCGCCCGCAGGCTCGCCAAGGCAGGCGCCAGAGTGGTGGTGC TGGAGGGCGGGAGCATCGGCTCCGGCGCCTCCGGCCGCAACGGGGGGCACCTGAACAACGGGCTTGCCCATTCCTATCTC GCGGCGAAATCGCACCTCGGAGCGGAGCGGGCGGCCACGCTCTACAGGGCCTTCGACGCCGCGGTGGATCACATCGAGCG GACCGTCGCCGAAGAGCAGATCCAGTGCAATTTCAAGCGCGTGGGCAAGCTGAAGCTGGCCTCGAAGCCCGCTCATTACG AGGGGCTGGCCCGCAATTTCGAGGCGCTGCATCGCGAGGTTGATCCAGATACGGCCATGCTCGACCGGTCGGCCATCGCG GACGAGGTGCGGTCGCAGGCGTTCCACGGCGGCATGCTGTCGCGCAAGAGCGCGGTGATGCACATGGGGCGCTACGCGGC AGGTCTCGCGGATGCCGCCGTGCGCCACGGGGCGACCATCTTCGAGAATGCGGCGGTGACGGCGCGCCGTCGGGAGGGCG CTCTCCATGTGCTCGAAACCCCGCGGGGGCAGGTCTCGGCGCGGGAGGTTCTGGTGGCCACCGGCGCCTACACGTCAGGC CCCTTCTCGTGGTTCCGCCGGCGGATCGTGGCCGTCGGCAGCTTCATCGTTGCCACGCGCCCGCTCAGCAGGGCGGAGAT CGCCTCCGTCATCGTGCGCGAACGCACCTTCGTGACCTCGCTGAACATCGGCAACTATTTCCGTCTGTCGCCCGACGACC GCCTGATCTTCGGCGGCCGCGCCCGCTTTTCCGCAGTCTCGGATCAGCGCTCCGATGCCAGGAGCGGCGAGATCCTGAAG GCGAACCTCGTCGGCCTCTTCCCGCAAATGTCCGGCGTGCCGCTCGATTATTGCTGGGGCGGTCTCGTGGACATGACGCA GGACCGTTATCCCCGCGCCGGGCGAACAGAAGACGGCCTGTGGTACGCCATGGGCTATTCCGGCCACGGGGCCCAGATGT CCAACCTGATGGGGCGCGTGATGGCCGAAGCCATGCTCGGCCGGGAGGACCGCAATCCGGTGAAGGGCCTCGACTGGCCG GCTGTACCCGGCCATCTCGGCACGCCCTGGTTCCTGCCGCTGGTCGGCTTTTATTACAAGATGCTCGACCGTTTCCAGTA A
Upstream 100 bases:
>100_bases CGCGGCCACGAGCCGGCCAACCCCTATTATGAATATACCGAGATCAAGGATATCCGCGGCTTGCCCGGCGTCCTGGGCCT CTGAGAAACGGCGGCCCGTC
Downstream 100 bases:
>100_bases GCTTCCGACAGGCGCATGGGACAGGGCGGGCCTATCGAGACCCGCCCTTTCTGCGTCAGGCCAGCCCGCCGATGTGGAAG CTCTTCGTCTCCAGATATTC
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MRFTSYWADTAPAFTGGTPGSVEGAYDVAIVGGGFTGLEAARRLAKAGARVVVLEGGSIGSGASGRNGGHLNNGLAHSYL AAKSHLGAERAATLYRAFDAAVDHIERTVAEEQIQCNFKRVGKLKLASKPAHYEGLARNFEALHREVDPDTAMLDRSAIA DEVRSQAFHGGMLSRKSAVMHMGRYAAGLADAAVRHGATIFENAAVTARRREGALHVLETPRGQVSAREVLVATGAYTSG PFSWFRRRIVAVGSFIVATRPLSRAEIASVIVRERTFVTSLNIGNYFRLSPDDRLIFGGRARFSAVSDQRSDARSGEILK ANLVGLFPQMSGVPLDYCWGGLVDMTQDRYPRAGRTEDGLWYAMGYSGHGAQMSNLMGRVMAEAMLGREDRNPVKGLDWP AVPGHLGTPWFLPLVGFYYKMLDRFQ
Sequences:
>Translated_426_residues MRFTSYWADTAPAFTGGTPGSVEGAYDVAIVGGGFTGLEAARRLAKAGARVVVLEGGSIGSGASGRNGGHLNNGLAHSYL AAKSHLGAERAATLYRAFDAAVDHIERTVAEEQIQCNFKRVGKLKLASKPAHYEGLARNFEALHREVDPDTAMLDRSAIA DEVRSQAFHGGMLSRKSAVMHMGRYAAGLADAAVRHGATIFENAAVTARRREGALHVLETPRGQVSAREVLVATGAYTSG PFSWFRRRIVAVGSFIVATRPLSRAEIASVIVRERTFVTSLNIGNYFRLSPDDRLIFGGRARFSAVSDQRSDARSGEILK ANLVGLFPQMSGVPLDYCWGGLVDMTQDRYPRAGRTEDGLWYAMGYSGHGAQMSNLMGRVMAEAMLGREDRNPVKGLDWP AVPGHLGTPWFLPLVGFYYKMLDRFQ >Mature_426_residues MRFTSYWADTAPAFTGGTPGSVEGAYDVAIVGGGFTGLEAARRLAKAGARVVVLEGGSIGSGASGRNGGHLNNGLAHSYL AAKSHLGAERAATLYRAFDAAVDHIERTVAEEQIQCNFKRVGKLKLASKPAHYEGLARNFEALHREVDPDTAMLDRSAIA DEVRSQAFHGGMLSRKSAVMHMGRYAAGLADAAVRHGATIFENAAVTARRREGALHVLETPRGQVSAREVLVATGAYTSG PFSWFRRRIVAVGSFIVATRPLSRAEIASVIVRERTFVTSLNIGNYFRLSPDDRLIFGGRARFSAVSDQRSDARSGEILK ANLVGLFPQMSGVPLDYCWGGLVDMTQDRYPRAGRTEDGLWYAMGYSGHGAQMSNLMGRVMAEAMLGREDRNPVKGLDWP AVPGHLGTPWFLPLVGFYYKMLDRFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=426, Percent_Identity=31.924882629108, Blast_Score=182, Evalue=3e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 46158; Mature: 46158
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFTSYWADTAPAFTGGTPGSVEGAYDVAIVGGGFTGLEAARRLAKAGARVVVLEGGSIG CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCC SGASGRNGGHLNNGLAHSYLAAKSHLGAERAATLYRAFDAAVDHIERTVAEEQIQCNFKR CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VGKLKLASKPAHYEGLARNFEALHREVDPDTAMLDRSAIADEVRSQAFHGGMLSRKSAVM HCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH HMGRYAAGLADAAVRHGATIFENAAVTARRREGALHVLETPRGQVSAREVLVATGAYTSG HHHHHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCEEEEECCCCCCCHHEEEEEECCCCCC PFSWFRRRIVAVGSFIVATRPLSRAEIASVIVRERTFVTSLNIGNYFRLSPDDRLIFGGR HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCCEEEECCCCEEEECCC ARFSAVSDQRSDARSGEILKANLVGLFPQMSGVPLDYCWGGLVDMTQDRYPRAGRTEDGL CHHHHHHCHHCCCCCCCEEEEHHHHHCCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCCE WYAMGYSGHGAQMSNLMGRVMAEAMLGREDRNPVKGLDWPAVPGHLGTPWFLPLVGFYYK EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH MLDRFQ HHHHCC >Mature Secondary Structure MRFTSYWADTAPAFTGGTPGSVEGAYDVAIVGGGFTGLEAARRLAKAGARVVVLEGGSIG CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCC SGASGRNGGHLNNGLAHSYLAAKSHLGAERAATLYRAFDAAVDHIERTVAEEQIQCNFKR CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VGKLKLASKPAHYEGLARNFEALHREVDPDTAMLDRSAIADEVRSQAFHGGMLSRKSAVM HCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH HMGRYAAGLADAAVRHGATIFENAAVTARRREGALHVLETPRGQVSAREVLVATGAYTSG HHHHHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCEEEEECCCCCCCHHEEEEEECCCCCC PFSWFRRRIVAVGSFIVATRPLSRAEIASVIVRERTFVTSLNIGNYFRLSPDDRLIFGGR HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCCEEEECCCCEEEECCC ARFSAVSDQRSDARSGEILKANLVGLFPQMSGVPLDYCWGGLVDMTQDRYPRAGRTEDGL CHHHHHHCHHCCCCCCCEEEEHHHHHCCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCCE WYAMGYSGHGAQMSNLMGRVMAEAMLGREDRNPVKGLDWPAVPGHLGTPWFLPLVGFYYK EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH MLDRFQ HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]