Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423657
Identifier: 158423657
GI number: 158423657
Start: 2345197
End: 2345916
Strand: Direct
Name: 158423657
Synonym: AZC_2033
Alternate gene names: NA
Gene position: 2345197-2345916 (Clockwise)
Preceding gene: 158423647
Following gene: 158423658
Centisome position: 43.67
GC content: 61.39
Gene sequence:
>720_bases ATGCTGGCTGTGTCTTCAGCCCACCGGGCACCTTTCAAGGACGAAACCGGCATGACCCGCTTCCGGCCCAAATACGTGAC CTTCGACTGCTACGGCACTCTCACCCACTTCCAGATGGCCGAGGCCGCGCGGGACATCTACGGGGCGCAGCTCGACGAGC CGCGCATGGCGCAGTTCGTGAAGAATTTCGCGGCCTACCGGCTCGATGAGATCCTCGGGGATTGGAAGCCCTATGATGAG GTGATCCATAATTCAGTGGAGCGCACCTGCAAGAAGAACGGCGTCGCGTTCCGGCCCGAGGATGCGCTGGCGATCTACAA CCGGGTGCCCTCCTGGGGCCCGCATCCGGATGTACCCGAGGGGCTGGCCAAGGTGGCGAAGGAGATCCCGCTCGTCATCC TCTCCAATGCCATGGATGTGCAGATCCCTTCCAACGTCGCCAAGCTCGGCGCGCCTTTCCACGCGGTCTATACGGCACAG CAGGCCGAGGCCTACAAGCCCCGCTTCCAGGCCTTCGAATATATGTTCGACATGCTGGGCTGCGGGCCGGAGGATGTGCT GCATTGCTCTTCTTCCTTCCGCTATGACCTCATGTCCGCCTATGATCTCGGCATCAAGAACAAGGTGTGGGTGAACCGCG GCCACGAGCCGGCCAACCCCTATTATGAATATACCGAGATCAAGGATATCCGCGGCTTGCCCGGCGTCCTGGGCCTCTGA
Upstream 100 bases:
>100_bases GCCCCGGTCGCGCAACTCTCTACCGGGCATCCGTCGAGATACGGAACATTCTGCTTCGCCGGCTTGCGGATTGCGGTGAA GCGGCTGGCGGGGCGCTCCT
Downstream 100 bases:
>100_bases GAAACGGCGGCCCGTCATGCGCTTCACATCCTATTGGGCCGACACCGCGCCGGCGTTCACGGGCGGGACGCCCGGCTCCG TTGAAGGCGCCTATGACGTC
Product: dehalogenase
Products: NA
Alternate protein names: HAD Family Hydrolase; Hydrolase; Haloalkanoic Acid Dehalogenase; Haloacid Dehalogenase; Dehalogenase; 2-Haloacid Dehalogenase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase I; 2-Haloalkanoic Acid Dehalogenase; Haloacid Dehalogenase-Like Family Hydrolase; Haloacid Dehydrogenase; 2-Haloacid Halidohydrolase Type II; HAD-Superfamily Hydrolase; Haloacid Dehalogenase Type II Truncated; 2-Haloacid Halidohydrolase IVa; 2-Haloacid Halidohydrolase IVA; Dehalogenase Protein; HAD Superfamily Haloalkanoic Acid Dehalogenase
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MLAVSSAHRAPFKDETGMTRFRPKYVTFDCYGTLTHFQMAEAARDIYGAQLDEPRMAQFVKNFAAYRLDEILGDWKPYDE VIHNSVERTCKKNGVAFRPEDALAIYNRVPSWGPHPDVPEGLAKVAKEIPLVILSNAMDVQIPSNVAKLGAPFHAVYTAQ QAEAYKPRFQAFEYMFDMLGCGPEDVLHCSSSFRYDLMSAYDLGIKNKVWVNRGHEPANPYYEYTEIKDIRGLPGVLGL
Sequences:
>Translated_239_residues MLAVSSAHRAPFKDETGMTRFRPKYVTFDCYGTLTHFQMAEAARDIYGAQLDEPRMAQFVKNFAAYRLDEILGDWKPYDE VIHNSVERTCKKNGVAFRPEDALAIYNRVPSWGPHPDVPEGLAKVAKEIPLVILSNAMDVQIPSNVAKLGAPFHAVYTAQ QAEAYKPRFQAFEYMFDMLGCGPEDVLHCSSSFRYDLMSAYDLGIKNKVWVNRGHEPANPYYEYTEIKDIRGLPGVLGL >Mature_239_residues MLAVSSAHRAPFKDETGMTRFRPKYVTFDCYGTLTHFQMAEAARDIYGAQLDEPRMAQFVKNFAAYRLDEILGDWKPYDE VIHNSVERTCKKNGVAFRPEDALAIYNRVPSWGPHPDVPEGLAKVAKEIPLVILSNAMDVQIPSNVAKLGAPFHAVYTAQ QAEAYKPRFQAFEYMFDMLGCGPEDVLHCSSSFRYDLMSAYDLGIKNKVWVNRGHEPANPYYEYTEIKDIRGLPGVLGL
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27037; Mature: 27037
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAVSSAHRAPFKDETGMTRFRPKYVTFDCYGTLTHFQMAEAARDIYGAQLDEPRMAQFV CCCCCCCCCCCCCCCCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH KNFAAYRLDEILGDWKPYDEVIHNSVERTCKKNGVAFRPEDALAIYNRVPSWGPHPDVPE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHCCCCCCCCCCCHH GLAKVAKEIPLVILSNAMDVQIPSNVAKLGAPFHAVYTAQQAEAYKPRFQAFEYMFDMLG HHHHHHHHCCEEEECCCCCEECCHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHC CGPEDVLHCSSSFRYDLMSAYDLGIKNKVWVNRGHEPANPYYEYTEIKDIRGLPGVLGL CCHHHHHHHCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLAVSSAHRAPFKDETGMTRFRPKYVTFDCYGTLTHFQMAEAARDIYGAQLDEPRMAQFV CCCCCCCCCCCCCCCCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH KNFAAYRLDEILGDWKPYDEVIHNSVERTCKKNGVAFRPEDALAIYNRVPSWGPHPDVPE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHCCCCCCCCCCCHH GLAKVAKEIPLVILSNAMDVQIPSNVAKLGAPFHAVYTAQQAEAYKPRFQAFEYMFDMLG HHHHHHHHCCEEEECCCCCEECCHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHC CGPEDVLHCSSSFRYDLMSAYDLGIKNKVWVNRGHEPANPYYEYTEIKDIRGLPGVLGL CCHHHHHHHCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA