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The map label for this gene is rpiR [C]

Identifier: 158423529

GI number: 158423529

Start: 2183373

End: 2184215

Strand: Direct

Name: rpiR [C]

Synonym: AZC_1905

Alternate gene names: 158423529

Gene position: 2183373-2184215 (Clockwise)

Preceding gene: 158423521

Following gene: 158423535

Centisome position: 40.66

GC content: 67.73

Gene sequence:

>843_bases
ATGATTGCCGATGGCCCTTCCTTCCTCGCGCGGGTCCGCGGCATCCTCGAAAGCCTCAGTCCGGCTGAACGGCGGCTCGG
GGATTTCGTCTGCGACTTTCCCGGCGAACTGGCCGCCTATTCGGCCTCGGAACTGGCGGCCCTCGCGCAGGTGTCGAACG
CGACCGTGTCGCGCTTCATCCGCCGGCTGGGCTATGAAAGCTATGAGGAAGCAAGGCGGCATGCGCGCGCCGAGACGCAG
ACCGGATCGCGCCTTTTCCTCGCCCGAGCAACAGACGCGCGCGGCGAGCAGTCGGTCCAGGCCCATGCGGCGCAGGGCAT
CGCCAATCTCGAGGCCACGTTCCAGTCGGTTTCGGAAGGGCAGATCAACAGCGCGGTCGAAGCCCTGCTCGGCGCCCGGA
AGGTGTGGGTGCTCGGGTTCCGCAGCAGCCATCCTTTCGCGGACTATTTCCGCTGGCAGATGACGCAGGTGATCGAGAAC
ATCGTCGCGATCCCGGGCGCCGGCGAGACGCTGGGCGAGCATCTCGTGAGCGTGCGCCCCGGGGATGTCTTCGTGGCCTT
CGGGCTGCGGCGGCGCGTCGCCCATTTCGACGATCTCTTGGCCATCGCCGAAAAGAACGGGGCGAAGGTGCTCTACATCA
CGGACGAGGGGGCTCCCCCGCGCCCGACCGCGGCCTGGCATTTCCGCTGCCAGACGCTGGCGCCGGGGCCGCTGTTCAAC
CACGTGTCCGTGCTCGCCCTCTGCCATCTCCTCGTGACGCGGGCCATCGAGAAGAGCGGCGCAGCGGGGCGCAAGCGGCT
GCGCGGCATCGAGGCCATCGGGGATAGCCTGGAAGAATTGTGA

Upstream 100 bases:

>100_bases
CTAATTATTGGGCAGAAAGGCGTCCCAGCCTGTCCGTGCGTTTGCCGGCCCGACGGATGCCGGATAGGAAGCTGAAAATG
AGTTTTCGTGGGAGCGCAGC

Downstream 100 bases:

>100_bases
CGCGCCGCCGCTGGACGGCGGCGCGCGGTTTTCCTCAGACGAGGACCATCCCGCCATCCACCAGCAGCGACTGGCCGGTC
ATGAAATCGGAGTCGGACGA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; RpiR-Family Transcriptional Regulatory Protein; SIS Domain Protein; Sugar Isomerase; Asparaginase; RpiR-Family Transcriptional Regulator; RpiR Family Transcriptional Regulatory Protein; Transcriptional Regulator Rpir Family; Transcriptional Regulator Protein; Helix-Turn-Helix Domain RpiR Family; RpiR Family Transcription Regulator

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MIADGPSFLARVRGILESLSPAERRLGDFVCDFPGELAAYSASELAALAQVSNATVSRFIRRLGYESYEEARRHARAETQ
TGSRLFLARATDARGEQSVQAHAAQGIANLEATFQSVSEGQINSAVEALLGARKVWVLGFRSSHPFADYFRWQMTQVIEN
IVAIPGAGETLGEHLVSVRPGDVFVAFGLRRRVAHFDDLLAIAEKNGAKVLYITDEGAPPRPTAAWHFRCQTLAPGPLFN
HVSVLALCHLLVTRAIEKSGAAGRKRLRGIEAIGDSLEEL

Sequences:

>Translated_280_residues
MIADGPSFLARVRGILESLSPAERRLGDFVCDFPGELAAYSASELAALAQVSNATVSRFIRRLGYESYEEARRHARAETQ
TGSRLFLARATDARGEQSVQAHAAQGIANLEATFQSVSEGQINSAVEALLGARKVWVLGFRSSHPFADYFRWQMTQVIEN
IVAIPGAGETLGEHLVSVRPGDVFVAFGLRRRVAHFDDLLAIAEKNGAKVLYITDEGAPPRPTAAWHFRCQTLAPGPLFN
HVSVLALCHLLVTRAIEKSGAAGRKRLRGIEAIGDSLEEL
>Mature_280_residues
MIADGPSFLARVRGILESLSPAERRLGDFVCDFPGELAAYSASELAALAQVSNATVSRFIRRLGYESYEEARRHARAETQ
TGSRLFLARATDARGEQSVQAHAAQGIANLEATFQSVSEGQINSAVEALLGARKVWVLGFRSSHPFADYFRWQMTQVIEN
IVAIPGAGETLGEHLVSVRPGDVFVAFGLRRRVAHFDDLLAIAEKNGAKVLYITDEGAPPRPTAAWHFRCQTLAPGPLFN
HVSVLALCHLLVTRAIEKSGAAGRKRLRGIEAIGDSLEEL

Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788159, Length=284, Percent_Identity=23.2394366197183, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30449; Mature: 30449

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIADGPSFLARVRGILESLSPAERRLGDFVCDFPGELAAYSASELAALAQVSNATVSRFI
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RRLGYESYEEARRHARAETQTGSRLFLARATDARGEQSVQAHAAQGIANLEATFQSVSEG
HHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
QINSAVEALLGARKVWVLGFRSSHPFADYFRWQMTQVIENIVAIPGAGETLGEHLVSVRP
HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
GDVFVAFGLRRRVAHFDDLLAIAEKNGAKVLYITDEGAPPRPTAAWHFRCQTLAPGPLFN
CCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCHHH
HVSVLALCHLLVTRAIEKSGAAGRKRLRGIEAIGDSLEEL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIADGPSFLARVRGILESLSPAERRLGDFVCDFPGELAAYSASELAALAQVSNATVSRFI
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RRLGYESYEEARRHARAETQTGSRLFLARATDARGEQSVQAHAAQGIANLEATFQSVSEG
HHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
QINSAVEALLGARKVWVLGFRSSHPFADYFRWQMTQVIENIVAIPGAGETLGEHLVSVRP
HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
GDVFVAFGLRRRVAHFDDLLAIAEKNGAKVLYITDEGAPPRPTAAWHFRCQTLAPGPLFN
CCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCHHH
HVSVLALCHLLVTRAIEKSGAAGRKRLRGIEAIGDSLEEL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA