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The map label for this gene is tetR

Identifier: 158423487

GI number: 158423487

Start: 2133162

End: 2133743

Strand: Direct

Name: tetR

Synonym: AZC_1863

Alternate gene names: NA

Gene position: 2133162-2133743 (Clockwise)

Preceding gene: 158423484

Following gene: 158423488

Centisome position: 39.73

GC content: 70.45

Gene sequence:

>582_bases
GTGAGAATGGGTGAGGAGACGGGTCGCAAGGGGCTGAGGCCGGGCGGGCGCAGTGCGCGCGTTCAGGCCGCTGTCCATGC
CGCCGTCCGGGACCTTCTGGCCGAGCGCGAGCGGGGCGAGATCAGCGTGCCGCTGGTGGCCGCCCGCGCCGGCGTCACGC
CCTCGACCATCTATCGCCGCTGGGGCGATCTGCAGGACCTTCTGGCCGATGTGGCGCTGGAGCAGATGCGCCCCGACACG
GATCCGGCGGAGACCGGCACGCTCCGAGGCGATCTCATCGCCTGGGTGGACCAGTATCGCGAGGAGATGTCCTCGGCGCC
CGGCACGGCCATGATCCGGGATGTTCTCGCCAGTCTCGAAGGCTCCGACCCCGCACGCCAGTGCTGCGCCATCTCGCAGG
CGCAACTGTCGGTGATCTTCGCGCGGGCGGCAGCCCGGGGGGAGGCGGTGCCGGACCTCGATCTGGCAACCGACCTGTGC
ATCGCGCCTGTCGTCTACCGCATCCTCTTCACGGACCGCCCCATGGACGGCGACTACGTGCGCACCCTGGTGGACCGCCT
TCTGATGTCGCTGCGGCCGTAA

Upstream 100 bases:

>100_bases
GACATGGGAGGCCTGAACTCTTATTGCAAAGAATGTGCGTTAGTGCGTTCTTAGCGCCTTCACGTAGCTAAAGCAAATTA
TTTGCGTTAATAGGATCGCA

Downstream 100 bases:

>100_bases
ATCTCTCTGGACGAAGATGCGACAGTCTTGCGCTGCGTCAGGACGCCATGCTGCCTCTTGGAGCATCATGGAACCGTCTG
GATCGGGCGAGGCGGCAGTG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR; TetR Family Receptor Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; TetR-Family Transcriptional Regulartory; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein; TetR Family Regulatory Protein; Transcriptional Regulator TetR

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRMGEETGRKGLRPGGRSARVQAAVHAAVRDLLAERERGEISVPLVAARAGVTPSTIYRRWGDLQDLLADVALEQMRPDT
DPAETGTLRGDLIAWVDQYREEMSSAPGTAMIRDVLASLEGSDPARQCCAISQAQLSVIFARAAARGEAVPDLDLATDLC
IAPVVYRILFTDRPMDGDYVRTLVDRLLMSLRP

Sequences:

>Translated_193_residues
MRMGEETGRKGLRPGGRSARVQAAVHAAVRDLLAERERGEISVPLVAARAGVTPSTIYRRWGDLQDLLADVALEQMRPDT
DPAETGTLRGDLIAWVDQYREEMSSAPGTAMIRDVLASLEGSDPARQCCAISQAQLSVIFARAAARGEAVPDLDLATDLC
IAPVVYRILFTDRPMDGDYVRTLVDRLLMSLRP
>Mature_193_residues
MRMGEETGRKGLRPGGRSARVQAAVHAAVRDLLAERERGEISVPLVAARAGVTPSTIYRRWGDLQDLLADVALEQMRPDT
DPAETGTLRGDLIAWVDQYREEMSSAPGTAMIRDVLASLEGSDPARQCCAISQAQLSVIFARAAARGEAVPDLDLATDLC
IAPVVYRILFTDRPMDGDYVRTLVDRLLMSLRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21062; Mature: 21062

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMGEETGRKGLRPGGRSARVQAAVHAAVRDLLAERERGEISVPLVAARAGVTPSTIYRR
CCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHH
WGDLQDLLADVALEQMRPDTDPAETGTLRGDLIAWVDQYREEMSSAPGTAMIRDVLASLE
HCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
GSDPARQCCAISQAQLSVIFARAAARGEAVPDLDLATDLCIAPVVYRILFTDRPMDGDYV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RTLVDRLLMSLRP
HHHHHHHHHHCCC
>Mature Secondary Structure
MRMGEETGRKGLRPGGRSARVQAAVHAAVRDLLAERERGEISVPLVAARAGVTPSTIYRR
CCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHH
WGDLQDLLADVALEQMRPDTDPAETGTLRGDLIAWVDQYREEMSSAPGTAMIRDVLASLE
HCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
GSDPARQCCAISQAQLSVIFARAAARGEAVPDLDLATDLCIAPVVYRILFTDRPMDGDYV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RTLVDRLLMSLRP
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA