Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is yusP [H]
Identifier: 158423484
GI number: 158423484
Start: 2127120
End: 2128778
Strand: Direct
Name: yusP [H]
Synonym: AZC_1860
Alternate gene names: 158423484
Gene position: 2127120-2128778 (Clockwise)
Preceding gene: 158423478
Following gene: 158423487
Centisome position: 39.61
GC content: 67.09
Gene sequence:
>1659_bases GTGGCAGGATTGTGGTGGCGGCGCGCACCTGCCGCATACGTTGCGTCGGCGCCATGCGGCACCGGCCTTGTCCGGTTGGT GGTTGTGAAGAACAATAATCAGTACAACTTAGCATCTGAGGGCACCCCGGACACCGCCGCGCCGCCGGGCGTGCCAGAGG CCCCCATGTCCGTCACTGCCGCCGCTCCTGCCCAGCTCGACCATTCCGAAATCCGCTCCATCCTCTTCGGCGTCATGCTG GCCATGCTGCTGGCGGCGCTGGACCAGACCATCGTGGCCACGGCCCTGCCCACGATCGGCGCCGATCTCGGGGATTTCGA GAGCCTGTCCTGGGTGGTGACGGCCTATCTGCTGACCTCGACCGCCGTGACGCCGCTCTATGGCCGGCTCAGCGACGTGC ATGGGCGGCGCATGATGATGCTCATCGCCATCTCGATCTTCTCGGTCGGCTCGCTCGCCTGCGCGCTCGCCCCCAACATG GTGGTGCTGATCTTCGCCCGCGGTCTTCAGGGGCTCGGCGGCGGCGGACTGATCTCGCTGGCCCAGACCATCATTGCGGA CATCGTGTCTCCCCGCGAGCGCGGACGCTATCAGGGCTATTTCGCAAGTGTCTTCATGGCGAGCAGCCTGTGCGGGCCGG TGCTCGGCGGCGTGCTGGCGCAGCATCTGCACTGGTCGCTCATCTTCTGGATCAACCTGCCGCTCGGCCTCGCGGCCTAT TTCATGACCGACCGCCAGCTCCGCCGCCTGCCGCGCCACGAGCGCAAGGCCAAGGTGGATGTCATCGGCGCCGTGCTGAT GGTCGTCTCCACCATTTCCCTGCTGCTGCTTCTGACCTGGGGCGGTGTGCGCTACGCTTGGGATGCGCCGGAAATCCTCG CGCTCGGCGGTGCCGCGGTGATCTTCGCCGTGCTCTTCGTCTGGCGCTTGCGCACCGCCGACGAACCTTTCCTGCCGCTG CCGGTCCTCCTGCATCCGGTGGTGGCGCGCGGCACGGCCACCGCTCTGATGACCATGGGCACGCTGATCGCCCTGTCCAT CAATGTGCCGCTCTATTTCGAGACCGCGCGCGGCCTGTCTGCCAGCCAATCGGGCCTCGCCCTCATTCCGCTCATGGGCG GCGTGGTGCTGGGGGCTCTCCTCGCCGGCCGGGCGCTGTTCATGCTCGAGCACTACAAGCGCGTGGCCATCTCCGGTATC GCAGTGGCCATTCTCGGTCTGCTGTTTCTGTCGCTGGGCCCGGAACGGCCGCCGCTGCCGCTGATGCTGCTCGTGTTCGG CCTGATGGGCATCGGCATCGGCTGCGTGCTGCCCATCACCACGGTTTCGATCCAGAACGCCGTGGAGCCGCATCAGATGG GCACCGCCACCGGCACCATGAACTTCTTCCGCTCGCTCGGCTCGGCGGTTCTGGTGGCGGGCTTCGGCGCGGTGCTGATG GCCGCCCTTGGTCTGGGGCCGGGGCAGGGCAATCTCGAACAGCTCATCGGCGGCGCCGATCAGGCGGGGCTCGCCTCCGC CTTCCGTATCGTCTTCGGCTGCGCTTCCGTCACGCTGATGCTGGGGCTTCTTGCGCTGATGAGCATGGAGCAGAAGCCGT TGCGCACGAGCGTCCGAAAGACCTCCGAAGAAGGCGGGGTGGTCGGCGTCGGCGAATAG
Upstream 100 bases:
>100_bases CGTGAGGCGCGCGAGGCCCCGGCACGGGCCGCAGGCTAGTGCAGCGGGCCCCTGATTTCAAAGTCATTCCACGATTTGTG GAAGGCAGCCGCCGCGGCTT
Downstream 100 bases:
>100_bases CGCCGACGCCCTGTCCCGTCACTCCTCGGCCGCGGCGTCCGCCTTGGCCTTGGCGGTCTTCTTCGTCCCCGCAGCCTTGG TGGTGGTCTTCTTGGCGGCG
Product: membrane transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MAGLWWRRAPAAYVASAPCGTGLVRLVVVKNNNQYNLASEGTPDTAAPPGVPEAPMSVTAAAPAQLDHSEIRSILFGVML AMLLAALDQTIVATALPTIGADLGDFESLSWVVTAYLLTSTAVTPLYGRLSDVHGRRMMMLIAISIFSVGSLACALAPNM VVLIFARGLQGLGGGGLISLAQTIIADIVSPRERGRYQGYFASVFMASSLCGPVLGGVLAQHLHWSLIFWINLPLGLAAY FMTDRQLRRLPRHERKAKVDVIGAVLMVVSTISLLLLLTWGGVRYAWDAPEILALGGAAVIFAVLFVWRLRTADEPFLPL PVLLHPVVARGTATALMTMGTLIALSINVPLYFETARGLSASQSGLALIPLMGGVVLGALLAGRALFMLEHYKRVAISGI AVAILGLLFLSLGPERPPLPLMLLVFGLMGIGIGCVLPITTVSIQNAVEPHQMGTATGTMNFFRSLGSAVLVAGFGAVLM AALGLGPGQGNLEQLIGGADQAGLASAFRIVFGCASVTLMLGLLALMSMEQKPLRTSVRKTSEEGGVVGVGE
Sequences:
>Translated_552_residues MAGLWWRRAPAAYVASAPCGTGLVRLVVVKNNNQYNLASEGTPDTAAPPGVPEAPMSVTAAAPAQLDHSEIRSILFGVML AMLLAALDQTIVATALPTIGADLGDFESLSWVVTAYLLTSTAVTPLYGRLSDVHGRRMMMLIAISIFSVGSLACALAPNM VVLIFARGLQGLGGGGLISLAQTIIADIVSPRERGRYQGYFASVFMASSLCGPVLGGVLAQHLHWSLIFWINLPLGLAAY FMTDRQLRRLPRHERKAKVDVIGAVLMVVSTISLLLLLTWGGVRYAWDAPEILALGGAAVIFAVLFVWRLRTADEPFLPL PVLLHPVVARGTATALMTMGTLIALSINVPLYFETARGLSASQSGLALIPLMGGVVLGALLAGRALFMLEHYKRVAISGI AVAILGLLFLSLGPERPPLPLMLLVFGLMGIGIGCVLPITTVSIQNAVEPHQMGTATGTMNFFRSLGSAVLVAGFGAVLM AALGLGPGQGNLEQLIGGADQAGLASAFRIVFGCASVTLMLGLLALMSMEQKPLRTSVRKTSEEGGVVGVGE >Mature_551_residues AGLWWRRAPAAYVASAPCGTGLVRLVVVKNNNQYNLASEGTPDTAAPPGVPEAPMSVTAAAPAQLDHSEIRSILFGVMLA MLLAALDQTIVATALPTIGADLGDFESLSWVVTAYLLTSTAVTPLYGRLSDVHGRRMMMLIAISIFSVGSLACALAPNMV VLIFARGLQGLGGGGLISLAQTIIADIVSPRERGRYQGYFASVFMASSLCGPVLGGVLAQHLHWSLIFWINLPLGLAAYF MTDRQLRRLPRHERKAKVDVIGAVLMVVSTISLLLLLTWGGVRYAWDAPEILALGGAAVIFAVLFVWRLRTADEPFLPLP VLLHPVVARGTATALMTMGTLIALSINVPLYFETARGLSASQSGLALIPLMGGVVLGALLAGRALFMLEHYKRVAISGIA VAILGLLFLSLGPERPPLPLMLLVFGLMGIGIGCVLPITTVSIQNAVEPHQMGTATGTMNFFRSLGSAVLVAGFGAVLMA ALGLGPGQGNLEQLIGGADQAGLASAFRIVFGCASVTLMLGLLALMSMEQKPLRTSVRKTSEEGGVVGVGE
Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=415, Percent_Identity=26.5060240963855, Blast_Score=132, Evalue=7e-32, Organism=Escherichia coli, GI1788710, Length=423, Percent_Identity=26.9503546099291, Blast_Score=115, Evalue=7e-27, Organism=Escherichia coli, GI87081983, Length=413, Percent_Identity=27.3607748184019, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI1790195, Length=362, Percent_Identity=25.414364640884, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788392, Length=357, Percent_Identity=28.2913165266106, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI1790146, Length=207, Percent_Identity=25.1207729468599, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323735, Length=435, Percent_Identity=28.2758620689655, Blast_Score=147, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6319770, Length=381, Percent_Identity=28.0839895013123, Blast_Score=123, Evalue=8e-29, Organism=Saccharomyces cerevisiae, GI6322958, Length=441, Percent_Identity=26.530612244898, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6325455, Length=264, Percent_Identity=29.5454545454545, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6321663, Length=351, Percent_Identity=24.7863247863248, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6324264, Length=209, Percent_Identity=24.4019138755981, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 57883; Mature: 57751
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLWWRRAPAAYVASAPCGTGLVRLVVVKNNNQYNLASEGTPDTAAPPGVPEAPMSVTA CCCCCCCCCCCHHHCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCEEE AAPAQLDHSEIRSILFGVMLAMLLAALDQTIVATALPTIGADLGDFESLSWVVTAYLLTS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TAVTPLYGRLSDVHGRRMMMLIAISIFSVGSLACALAPNMVVLIFARGLQGLGGGGLISL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHH AQTIIADIVSPRERGRYQGYFASVFMASSLCGPVLGGVLAQHLHWSLIFWINLPLGLAAY HHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHH FMTDRQLRRLPRHERKAKVDVIGAVLMVVSTISLLLLLTWGGVRYAWDAPEILALGGAAV HHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCHHH IFAVLFVWRLRTADEPFLPLPVLLHPVVARGTATALMTMGTLIALSINVPLYFETARGLS HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCCCC ASQSGLALIPLMGGVVLGALLAGRALFMLEHYKRVAISGIAVAILGLLFLSLGPERPPLP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LMLLVFGLMGIGIGCVLPITTVSIQNAVEPHQMGTATGTMNFFRSLGSAVLVAGFGAVLM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AALGLGPGQGNLEQLIGGADQAGLASAFRIVFGCASVTLMLGLLALMSMEQKPLRTSVRK HHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TSEEGGVVGVGE HCCCCCEEECCC >Mature Secondary Structure AGLWWRRAPAAYVASAPCGTGLVRLVVVKNNNQYNLASEGTPDTAAPPGVPEAPMSVTA CCCCCCCCCCHHHCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCEEE AAPAQLDHSEIRSILFGVMLAMLLAALDQTIVATALPTIGADLGDFESLSWVVTAYLLTS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TAVTPLYGRLSDVHGRRMMMLIAISIFSVGSLACALAPNMVVLIFARGLQGLGGGGLISL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHH AQTIIADIVSPRERGRYQGYFASVFMASSLCGPVLGGVLAQHLHWSLIFWINLPLGLAAY HHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHH FMTDRQLRRLPRHERKAKVDVIGAVLMVVSTISLLLLLTWGGVRYAWDAPEILALGGAAV HHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCHHH IFAVLFVWRLRTADEPFLPLPVLLHPVVARGTATALMTMGTLIALSINVPLYFETARGLS HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCCCC ASQSGLALIPLMGGVVLGALLAGRALFMLEHYKRVAISGIAVAILGLLFLSLGPERPPLP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LMLLVFGLMGIGIGCVLPITTVSIQNAVEPHQMGTATGTMNFFRSLGSAVLVAGFGAVLM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AALGLGPGQGNLEQLIGGADQAGLASAFRIVFGCASVTLMLGLLALMSMEQKPLRTSVRK HHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TSEEGGVVGVGE HCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]