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The map label for this gene is recJ [H]

Identifier: 158423475

GI number: 158423475

Start: 2117519

End: 2119339

Strand: Direct

Name: recJ [H]

Synonym: AZC_1851

Alternate gene names: 158423475

Gene position: 2117519-2119339 (Clockwise)

Preceding gene: 158423474

Following gene: 158423478

Centisome position: 39.43

GC content: 71.88

Gene sequence:

>1821_bases
TTGGGCTTCATGCCTTTCGTGAACATCGCCCTGACGAATCGTCCTTTCCTGTCCGTCGCCCGCTCGGCCACCGGCCGCAC
TTGGCGCGACCGGCTGGACGTGCGCGCCTCGCAGATGGCGCTCGCCATCGCCCAGCGGCATTTCGTGCCGGATCTCGTGG
CCCGTATCCTTGCCGGGCGGGGCGTCGACATCGACGACGTGCCCGCCTTCCTCGACCCCACCATCAAGGCGCTGCTGCCG
GACCCGGACACGCTCACCGACATGGGCGGGGCCGTGGAGCGGGTGGCGGCGGCGGTGACTCGCGGCGAGCAGGTGGCCGT
GTTCGGCGACTATGACGTGGACGGCGCCACCTCGACCGCCCTCCTCGTGGACGTGCTCCGCGCGGCGGGGCTTGATCCCT
TCTTCCACATTCCCGACCGCATCTTCGAGGGCTACGGCCCCAATGTGAACGCCATCGAGCAACTGGCGGCGCGGGGTGTG
ACGCTTCTCATCACGGTGGACTGCGGCACCACCAGCACGGAGCCTCTGGCGGCAGCCCGGCGGCTCGGGCTCGATGTGGT
GGTGATCGACCACCATCAGGCGGGCGAGCACCTGCCGGACGCCAACGCCATCGTGAACCCCAACCGGGAGGATGATCTTT
CCGGCCTCGGGCATCTGTGTGCGGTGGGCCTCGTCTTCGTGACAGTGGTGGGACTCGTGCGCAAATTGCGCGAGATGGGC
CACTGGACCGGCGACCGGCCAGCACCGGATTTGCTCGCCGCCCTCGATCTGGTAGCGCTGGGCACGGTGGCGGACGTGGT
GCCGCTCAAGGGGCTCAACCGCGCCTTCGTCACCAAGGGCCTCATCGCCCTGCGCCGCCGCCAGCGGCCGGGGCTCACGG
CGCTCATGGACGTCTCCCGTCTCGACGGGCCGCCTCGCCCCTGGCACCTCGGCTTTCTGCTCGGTCCGCGCATCAATGCC
GGCGGGCGCATCGGCGATGCGACCCTCGGCACGCGCCTGCTGCTGACACAGGATCCCGCCGAGGCGCGCGCCATCGCCGC
CGAACTGGACCGCCTCAACACCGAGCGTCAGGCGGTGGAGCAGGGCATCCTCGCGGATGCCGAGGCCGAGGCGCAGGCCG
CCATGGGAATTGCGGGCGACGGCGCGTCCACCGTGGTTGTGAGCGGGCAGGGGTGGCACCCCGGCGTGGTCGGCCTCGTC
GCCTCGCGCCTCAAGGAGCGCTTCAACCGCCCGGCCTTCGCCATCGCTTTCACGGGCGAGACCGGCACCGGCTCCGGCCG
CTCCATCCAGGGTGTCGATCTCGGCAAGGCGGTGCGCGCGGCCGTGGAGGCGGGGCTGCTGGTGAAGGGCGGCGGCCATG
CCATGGCGGCCGGCCTCACGGTGGAGAAGGCCCGCCTCGGCGACCTGCGGGCTTTCCTCGAAAACGCGCTCGCCCCCGAC
GTCGCCAAGGCGGCGGGCGAGGGCACGCTGACCATCGACGGCGCGCTCACCGCCAGCGGCGCCACGCCGGCGCTGCTCGA
TCAGGTGGCGAAAGCCGGCCCCTTCGGCGCGGGCAATCCCGAGCCGGTCTTCGCCTTCCCGTCCCACCGCCTCACCTATG
CGGAGACCTTCGGCAACGGCCATGTTCGCGCCCGCCTCGTGGCCGGCGACGGCACCACGCTCAAGGCCGTGGCCTTCCGC
TGCGCCGAGGAGCCGCTGGGCCGCGCCATCCTCAATGCGCGGGGCCGCAACCTGCACGTGGCCGGCGGCCTCGACATGGA
CCACTGGCAGGGCGAGGCCCGCGTCAGCCTGCGCGTGCGGGACGTGGCCGAGGTCGGTTGA

Upstream 100 bases:

>100_bases
GGAGGCGGCTTTCCCCACGGCCCATGGCCTCTCTCAACCCGCCCGTCTGCGTGCCACGCGGGGGCGGGTCCCATTTTCAG
GCTCGACGCGGCGCAGTTGC

Downstream 100 bases:

>100_bases
TCCCTATCGCCCCGCATCCGGCTTGCGCGTCGGCTTGTCTAAGAGGATGCCGCGCTTCAGCGCACCGGCCCCGAATTTCG
CCCGCACCGCATCCATGGCT

Product: RecJ exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 606; Mature: 605

Protein sequence:

>606_residues
MGFMPFVNIALTNRPFLSVARSATGRTWRDRLDVRASQMALAIAQRHFVPDLVARILAGRGVDIDDVPAFLDPTIKALLP
DPDTLTDMGGAVERVAAAVTRGEQVAVFGDYDVDGATSTALLVDVLRAAGLDPFFHIPDRIFEGYGPNVNAIEQLAARGV
TLLITVDCGTTSTEPLAAARRLGLDVVVIDHHQAGEHLPDANAIVNPNREDDLSGLGHLCAVGLVFVTVVGLVRKLREMG
HWTGDRPAPDLLAALDLVALGTVADVVPLKGLNRAFVTKGLIALRRRQRPGLTALMDVSRLDGPPRPWHLGFLLGPRINA
GGRIGDATLGTRLLLTQDPAEARAIAAELDRLNTERQAVEQGILADAEAEAQAAMGIAGDGASTVVVSGQGWHPGVVGLV
ASRLKERFNRPAFAIAFTGETGTGSGRSIQGVDLGKAVRAAVEAGLLVKGGGHAMAAGLTVEKARLGDLRAFLENALAPD
VAKAAGEGTLTIDGALTASGATPALLDQVAKAGPFGAGNPEPVFAFPSHRLTYAETFGNGHVRARLVAGDGTTLKAVAFR
CAEEPLGRAILNARGRNLHVAGGLDMDHWQGEARVSLRVRDVAEVG

Sequences:

>Translated_606_residues
MGFMPFVNIALTNRPFLSVARSATGRTWRDRLDVRASQMALAIAQRHFVPDLVARILAGRGVDIDDVPAFLDPTIKALLP
DPDTLTDMGGAVERVAAAVTRGEQVAVFGDYDVDGATSTALLVDVLRAAGLDPFFHIPDRIFEGYGPNVNAIEQLAARGV
TLLITVDCGTTSTEPLAAARRLGLDVVVIDHHQAGEHLPDANAIVNPNREDDLSGLGHLCAVGLVFVTVVGLVRKLREMG
HWTGDRPAPDLLAALDLVALGTVADVVPLKGLNRAFVTKGLIALRRRQRPGLTALMDVSRLDGPPRPWHLGFLLGPRINA
GGRIGDATLGTRLLLTQDPAEARAIAAELDRLNTERQAVEQGILADAEAEAQAAMGIAGDGASTVVVSGQGWHPGVVGLV
ASRLKERFNRPAFAIAFTGETGTGSGRSIQGVDLGKAVRAAVEAGLLVKGGGHAMAAGLTVEKARLGDLRAFLENALAPD
VAKAAGEGTLTIDGALTASGATPALLDQVAKAGPFGAGNPEPVFAFPSHRLTYAETFGNGHVRARLVAGDGTTLKAVAFR
CAEEPLGRAILNARGRNLHVAGGLDMDHWQGEARVSLRVRDVAEVG
>Mature_605_residues
GFMPFVNIALTNRPFLSVARSATGRTWRDRLDVRASQMALAIAQRHFVPDLVARILAGRGVDIDDVPAFLDPTIKALLPD
PDTLTDMGGAVERVAAAVTRGEQVAVFGDYDVDGATSTALLVDVLRAAGLDPFFHIPDRIFEGYGPNVNAIEQLAARGVT
LLITVDCGTTSTEPLAAARRLGLDVVVIDHHQAGEHLPDANAIVNPNREDDLSGLGHLCAVGLVFVTVVGLVRKLREMGH
WTGDRPAPDLLAALDLVALGTVADVVPLKGLNRAFVTKGLIALRRRQRPGLTALMDVSRLDGPPRPWHLGFLLGPRINAG
GRIGDATLGTRLLLTQDPAEARAIAAELDRLNTERQAVEQGILADAEAEAQAAMGIAGDGASTVVVSGQGWHPGVVGLVA
SRLKERFNRPAFAIAFTGETGTGSGRSIQGVDLGKAVRAAVEAGLLVKGGGHAMAAGLTVEKARLGDLRAFLENALAPDV
AKAAGEGTLTIDGALTASGATPALLDQVAKAGPFGAGNPEPVFAFPSHRLTYAETFGNGHVRARLVAGDGTTLKAVAFRC
AEEPLGRAILNARGRNLHVAGGLDMDHWQGEARVSLRVRDVAEVG

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=564, Percent_Identity=35.9929078014184, Blast_Score=287, Evalue=1e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 63449; Mature: 63318

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFMPFVNIALTNRPFLSVARSATGRTWRDRLDVRASQMALAIAQRHFVPDLVARILAGR
CCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
GVDIDDVPAFLDPTIKALLPDPDTLTDMGGAVERVAAAVTRGEQVAVFGDYDVDGATSTA
CCCCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHH
LLVDVLRAAGLDPFFHIPDRIFEGYGPNVNAIEQLAARGVTLLITVDCGTTSTEPLAAAR
HHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHH
RLGLDVVVIDHHQAGEHLPDANAIVNPNREDDLSGLGHLCAVGLVFVTVVGLVRKLREMG
HCCCEEEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HWTGDRPAPDLLAALDLVALGTVADVVPLKGLNRAFVTKGLIALRRRQRPGLTALMDVSR
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
LDGPPRPWHLGFLLGPRINAGGRIGDATLGTRLLLTQDPAEARAIAAELDRLNTERQAVE
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHH
QGILADAEAEAQAAMGIAGDGASTVVVSGQGWHPGVVGLVASRLKERFNRPAFAIAFTGE
HCCCCCCCHHHHHHCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECC
TGTGSGRSIQGVDLGKAVRAAVEAGLLVKGGGHAMAAGLTVEKARLGDLRAFLENALAPD
CCCCCCCEECCCCHHHHHHHHHHCCEEEECCCCEEEECCEEHHHHHHHHHHHHHHHCCCH
VAKAAGEGTLTIDGALTASGATPALLDQVAKAGPFGAGNPEPVFAFPSHRLTYAETFGNG
HHHHCCCCEEEECCEEECCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEECCCC
HVRARLVAGDGTTLKAVAFRCAEEPLGRAILNARGRNLHVAGGLDMDHWQGEARVSLRVR
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCEEEEEEEE
DVAEVG
CHHHCC
>Mature Secondary Structure 
GFMPFVNIALTNRPFLSVARSATGRTWRDRLDVRASQMALAIAQRHFVPDLVARILAGR
CCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
GVDIDDVPAFLDPTIKALLPDPDTLTDMGGAVERVAAAVTRGEQVAVFGDYDVDGATSTA
CCCCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHH
LLVDVLRAAGLDPFFHIPDRIFEGYGPNVNAIEQLAARGVTLLITVDCGTTSTEPLAAAR
HHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHH
RLGLDVVVIDHHQAGEHLPDANAIVNPNREDDLSGLGHLCAVGLVFVTVVGLVRKLREMG
HCCCEEEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HWTGDRPAPDLLAALDLVALGTVADVVPLKGLNRAFVTKGLIALRRRQRPGLTALMDVSR
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
LDGPPRPWHLGFLLGPRINAGGRIGDATLGTRLLLTQDPAEARAIAAELDRLNTERQAVE
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHH
QGILADAEAEAQAAMGIAGDGASTVVVSGQGWHPGVVGLVASRLKERFNRPAFAIAFTGE
HCCCCCCCHHHHHHCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECC
TGTGSGRSIQGVDLGKAVRAAVEAGLLVKGGGHAMAAGLTVEKARLGDLRAFLENALAPD
CCCCCCCEECCCCHHHHHHHHHHCCEEEECCCCEEEECCEEHHHHHHHHHHHHHHHCCCH
VAKAAGEGTLTIDGALTASGATPALLDQVAKAGPFGAGNPEPVFAFPSHRLTYAETFGNG
HHHHCCCCEEEECCEEECCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEECCCC
HVRARLVAGDGTTLKAVAFRCAEEPLGRAILNARGRNLHVAGGLDMDHWQGEARVSLRVR
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCEEEEEEEE
DVAEVG
CHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]