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The map label for this gene is cycA [H]

Identifier: 158423445

GI number: 158423445

Start: 2083863

End: 2084297

Strand: Direct

Name: cycA [H]

Synonym: AZC_1821

Alternate gene names: 158423445

Gene position: 2083863-2084297 (Clockwise)

Preceding gene: 158423444

Following gene: 158423447

Centisome position: 38.81

GC content: 69.2

Gene sequence:

>435_bases
TTGTCGATGCGCATTGCGGTGCTTGCCGCCCTTCTCGTCCCCCTCGCCGCGACGGTGGTTGTCGCCCAGACCGATCCGAT
CGCCCAGCGCAAGGCCGTCATGAAGGAGATCGGCGAACAGACCAAGGCCGCCGGTGCCATCGTGAAGGGCGAGGCGCCCT
ACGATGCGGCCAAGGCCGCCGCCATCTTCAAGACCTATTCGGAAGGCGCGGACAAGTTCGGCGCGCTGTTCCCCGCGGGC
TCCGACAAGGGCGACACCAAGGCCGCTCCGGCCATCTGGTCCGACCGCGCCGGGTTCGACGCCGCGCTCGCCAAGTTCAA
GGCGGCGGTGGCGGCCAATATCGACAAGGTCGGCACCGCCGACGGCTTCAAGACCGCCATGGCGGCCGTCGGCCCCGAGT
GCCGCGCCTGCCACCAGAGCTACCAGCAGCGCTGA

Upstream 100 bases:

>100_bases
GTGTCTTTACCATCACGCTTTCGAGAGTCGTCGCGAAGGCGGATGGTGACTGTCATGTGAGCAGTCTAGAACCAGTCTGG
TTCCAATCGACTCGCAGGAG

Downstream 100 bases:

>100_bases
GCGCATTCACCGGTCAGGGCAATCGGGCCGCGCCTTCGGGTGCGGCCCTTTTCGTTTGGGCCTCAGCCGAGGGTCGAGAT
GAACCAGGCGATGCCCGCCG

Product: cytochrome c precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSMRIAVLAALLVPLAATVVVAQTDPIAQRKAVMKEIGEQTKAAGAIVKGEAPYDAAKAAAIFKTYSEGADKFGALFPAG
SDKGDTKAAPAIWSDRAGFDAALAKFKAAVAANIDKVGTADGFKTAMAAVGPECRACHQSYQQR

Sequences:

>Translated_144_residues
MSMRIAVLAALLVPLAATVVVAQTDPIAQRKAVMKEIGEQTKAAGAIVKGEAPYDAAKAAAIFKTYSEGADKFGALFPAG
SDKGDTKAAPAIWSDRAGFDAALAKFKAAVAANIDKVGTADGFKTAMAAVGPECRACHQSYQQR
>Mature_143_residues
SMRIAVLAALLVPLAATVVVAQTDPIAQRKAVMKEIGEQTKAAGAIVKGEAPYDAAKAAAIFKTYSEGADKFGALFPAGS
DKGDTKAAPAIWSDRAGFDAALAKFKAAVAANIDKVGTADGFKTAMAAVGPECRACHQSYQQR

Specific function: Cytochrome c' is the most widely occurring bacterial c- type cytochrome. Cytochromes c' are high-spin proteins and the heme has no sixth ligand. Their exact function is not known [H]

COG id: COG3909

COG function: function code C; Cytochrome c556

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010980
- InterPro:   IPR002321
- InterPro:   IPR012127 [H]

Pfam domain/function: PF01322 Cytochrom_C_2 [H]

EC number: NA

Molecular weight: Translated: 14831; Mature: 14700

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS51009 CYTCII

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMRIAVLAALLVPLAATVVVAQTDPIAQRKAVMKEIGEQTKAAGAIVKGEAPYDAAKAA
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHH
AIFKTYSEGADKFGALFPAGSDKGDTKAAPAIWSDRAGFDAALAKFKAAVAANIDKVGTA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCC
DGFKTAMAAVGPECRACHQSYQQR
CHHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure 
SMRIAVLAALLVPLAATVVVAQTDPIAQRKAVMKEIGEQTKAAGAIVKGEAPYDAAKAA
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHH
AIFKTYSEGADKFGALFPAGSDKGDTKAAPAIWSDRAGFDAALAKFKAAVAANIDKVGTA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCC
DGFKTAMAAVGPECRACHQSYQQR
CHHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6273892; 9826513; 12407175 [H]