Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423394
Identifier: 158423394
GI number: 158423394
Start: 2020974
End: 2021618
Strand: Direct
Name: 158423394
Synonym: AZC_1770
Alternate gene names: NA
Gene position: 2020974-2021618 (Clockwise)
Preceding gene: 158423393
Following gene: 158423400
Centisome position: 37.64
GC content: 71.01
Gene sequence:
>645_bases ATGAGCAATTCCGTGCCTGACGCGCTGCCTGCGGCCGCCACCGGCCCGGATGGGCGCCTCGCCGCGCCCGCTGTCGCCCG CAACCGCGATGTCATTCTCGACGTGCTGCGGCCGCTTTTGCCGGCGAGTGGGCAGGTGCTGGAGATCGCCAGCGGCACGG GCGAGCATCTGGTGCATTTCGCCCGCGCTCTGCCGGGCCTCACGTGGCAGCCATCCGACCCTTCTCCCGCCGCCCGCGCG TCCATCGCGGCGTGGGCCGGGGCGGAGGGCCTTTCCAACGTGCTGCCGCCGCTGGACCTCGATGCGGCGGCGGCCGAATG GCCGGTGACGCAGGCGGACGCCATCGTCTGCATCAACATGATCCACATCAGCCCTTGGGCCTCGACGCAGGGCCTGCTCG CCGGGGCGCAGCGCCTGCTGCCGTCGGGCGGCGTACTCTATCTTTACGGCCCCTACCGGCGCGCCAACGTGCCCACTGCC CCCAGTAACGAAGCCTTCGATGCGGACCTCAAGCGCCGCAACCCGGCCTGGGGCCTGCGGCTGCTTGAGGACGTGGCCAC ATTGGCGGGCACGCACGGGCTCATCCTGGAGCGCGTGGTGGAGATGCCCGCCAACAATCTTTCGGTGGTGTTCCGCCGCG CGTGA
Upstream 100 bases:
>100_bases CTTCGCCGCCATCCGCCATGGCAAGGGCGTGGAGGACGTGGCCGCCTTCATCGAGAAGGCGGGCGGCCTCGCGGCCTGAA GCGGCGCGAAAGGGAAGGCG
Downstream 100 bases:
>100_bases GGCCGTCAGGAGGCCTCGGTGACGGCCGCAAGGTTCTGCCGGTGCACCGCTTCATAGGGCGCGAAATAGCCGATGGCGCC AGAGGCGAAGTCTTCCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSNSVPDALPAAATGPDGRLAAPAVARNRDVILDVLRPLLPASGQVLEIASGTGEHLVHFARALPGLTWQPSDPSPAARA SIAAWAGAEGLSNVLPPLDLDAAAAEWPVTQADAIVCINMIHISPWASTQGLLAGAQRLLPSGGVLYLYGPYRRANVPTA PSNEAFDADLKRRNPAWGLRLLEDVATLAGTHGLILERVVEMPANNLSVVFRRA
Sequences:
>Translated_214_residues MSNSVPDALPAAATGPDGRLAAPAVARNRDVILDVLRPLLPASGQVLEIASGTGEHLVHFARALPGLTWQPSDPSPAARA SIAAWAGAEGLSNVLPPLDLDAAAAEWPVTQADAIVCINMIHISPWASTQGLLAGAQRLLPSGGVLYLYGPYRRANVPTA PSNEAFDADLKRRNPAWGLRLLEDVATLAGTHGLILERVVEMPANNLSVVFRRA >Mature_213_residues SNSVPDALPAAATGPDGRLAAPAVARNRDVILDVLRPLLPASGQVLEIASGTGEHLVHFARALPGLTWQPSDPSPAARAS IAAWAGAEGLSNVLPPLDLDAAAAEWPVTQADAIVCINMIHISPWASTQGLLAGAQRLLPSGGVLYLYGPYRRANVPTAP SNEAFDADLKRRNPAWGLRLLEDVATLAGTHGLILERVVEMPANNLSVVFRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=205, Percent_Identity=46.8292682926829, Blast_Score=150, Evalue=9e-37, Organism=Homo sapiens, GI93102391, Length=142, Percent_Identity=46.4788732394366, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI93102401, Length=133, Percent_Identity=46.6165413533835, Blast_Score=88, Evalue=7e-18, Organism=Caenorhabditis elegans, GI71998087, Length=203, Percent_Identity=37.4384236453202, Blast_Score=133, Evalue=8e-32, Organism=Drosophila melanogaster, GI28574095, Length=197, Percent_Identity=36.5482233502538, Blast_Score=127, Evalue=6e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22449; Mature: 22318
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSVPDALPAAATGPDGRLAAPAVARNRDVILDVLRPLLPASGQVLEIASGTGEHLVHF CCCCCCCCCCCCCCCCCCCEECCHHHCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHH ARALPGLTWQPSDPSPAARASIAAWAGAEGLSNVLPPLDLDAAAAEWPVTQADAIVCINM HHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEE IHISPWASTQGLLAGAQRLLPSGGVLYLYGPYRRANVPTAPSNEAFDADLKRRNPAWGLR EEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCHHHHH LLEDVATLAGTHGLILERVVEMPANNLSVVFRRA HHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure SNSVPDALPAAATGPDGRLAAPAVARNRDVILDVLRPLLPASGQVLEIASGTGEHLVHF CCCCCCCCCCCCCCCCCCEECCHHHCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHH ARALPGLTWQPSDPSPAARASIAAWAGAEGLSNVLPPLDLDAAAAEWPVTQADAIVCINM HHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEE IHISPWASTQGLLAGAQRLLPSGGVLYLYGPYRRANVPTAPSNEAFDADLKRRNPAWGLR EEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCHHHHH LLEDVATLAGTHGLILERVVEMPANNLSVVFRRA HHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA