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The map label for this gene is ureF

Identifier: 158423392

GI number: 158423392

Start: 2019643

End: 2020341

Strand: Direct

Name: ureF

Synonym: AZC_1768

Alternate gene names: 158423392

Gene position: 2019643-2020341 (Clockwise)

Preceding gene: 158423391

Following gene: 158423393

Centisome position: 37.61

GC content: 70.53

Gene sequence:

>699_bases
ATGACGATGGCGGAAACGGGCGCGCCGCCGAGCGCGCTCGCGCTCTTTGCCTGGCTGTCTCCCGGCTTTCCCGTGGGGGC
CTATGCCTATTCCCACGCGCTGGAATGGGCGGCGGAAGCGGGCGATATCACCGATGAATCGAGCCTCGAAAGCTGGCTGC
GCGATCTCATGCTGCTCGGCTTCGGCCGGGCCGATGGCATCCTCCTCGCTCATGCCTACGGGGCGGGCGCGGCCGGGGAT
GTGCCAGCGCTGGCGCAGGTGAATGCCCGCGCGGTCGCCCTCTCGCCCACCGCCGAACTGCGGCTGGAGACCTGCCAGCA
GGGCCGCAGCTTCCTTGATGCCGTGCGCGCCGCATGGCCCCACGGCGGGTTGGACGCGGCGGCGGCGCATCTGCCGCCTG
ATGTCGCCTATCCGGTGGCGGTGGGCTATGCAGCGGCGCTGCATGGCGTGCCCCGCGCGGCGGTGCTGGAAGCGTATCTC
TTCGCCGTCACGCAGACGCTGGTTTCCGCCGCGCTGCGCATCGCGCCCATCGGCCAGACGGCCGGCACCCGCGTGGTGGC
CCGCCTCATGCCGGCCGTGCAGGCGCTGGCGGGTGACATTCCGACCCTCACGCTCGACGATCTCGGCACCGCCACCTTCC
GGGCCGACCTCGGCAGCATGCGACACGAAACCCAATACACGAGGCTGTTTCGATCATGA

Upstream 100 bases:

>100_bases
CCACCACGGGCATGACCACGCCCACGATCACGCCCATGGCGCCTCCTGCGGCTGCGGCCATACGCACCACCATGACTGAC
GCCGGGACCGGGCGGCGGCC

Downstream 100 bases:

>100_bases
CCAGCAACGGACCCTTGCGGGTTGGCATCGGCGGGCCGGTGGGCTCTGGCAAGACGGCGCTGATGGAAGCGCTCTGCAAG
ACCTTCCGCGCCCGCTACAA

Product: urease accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MTMAETGAPPSALALFAWLSPGFPVGAYAYSHALEWAAEAGDITDESSLESWLRDLMLLGFGRADGILLAHAYGAGAAGD
VPALAQVNARAVALSPTAELRLETCQQGRSFLDAVRAAWPHGGLDAAAAHLPPDVAYPVAVGYAAALHGVPRAAVLEAYL
FAVTQTLVSAALRIAPIGQTAGTRVVARLMPAVQALAGDIPTLTLDDLGTATFRADLGSMRHETQYTRLFRS

Sequences:

>Translated_232_residues
MTMAETGAPPSALALFAWLSPGFPVGAYAYSHALEWAAEAGDITDESSLESWLRDLMLLGFGRADGILLAHAYGAGAAGD
VPALAQVNARAVALSPTAELRLETCQQGRSFLDAVRAAWPHGGLDAAAAHLPPDVAYPVAVGYAAALHGVPRAAVLEAYL
FAVTQTLVSAALRIAPIGQTAGTRVVARLMPAVQALAGDIPTLTLDDLGTATFRADLGSMRHETQYTRLFRS
>Mature_231_residues
TMAETGAPPSALALFAWLSPGFPVGAYAYSHALEWAAEAGDITDESSLESWLRDLMLLGFGRADGILLAHAYGAGAAGDV
PALAQVNARAVALSPTAELRLETCQQGRSFLDAVRAAWPHGGLDAAAAHLPPDVAYPVAVGYAAALHGVPRAAVLEAYLF
AVTQTLVSAALRIAPIGQTAGTRVVARLMPAVQALAGDIPTLTLDDLGTATFRADLGSMRHETQYTRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_AZOC5 (A8I4T0)

Other databases:

- EMBL:   AP009384
- RefSeq:   YP_001524684.1
- GeneID:   5691562
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_1768
- HOGENOM:   HBG709295
- OMA:   WLSPAFP
- ProtClustDB:   CLSK980188
- BioCyc:   ACAU438753:AZC_1768-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 24164; Mature: 24033

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMAETGAPPSALALFAWLSPGFPVGAYAYSHALEWAAEAGDITDESSLESWLRDLMLLG
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
FGRADGILLAHAYGAGAAGDVPALAQVNARAVALSPTAELRLETCQQGRSFLDAVRAAWP
CCCCCCEEEEEECCCCCCCCCCHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
HGGLDAAAAHLPPDVAYPVAVGYAAALHGVPRAAVLEAYLFAVTQTLVSAALRIAPIGQT
CCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AGTRVVARLMPAVQALAGDIPTLTLDDLGTATFRADLGSMRHETQYTRLFRS
HHHHHHHHHHHHHHHHHCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TMAETGAPPSALALFAWLSPGFPVGAYAYSHALEWAAEAGDITDESSLESWLRDLMLLG
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
FGRADGILLAHAYGAGAAGDVPALAQVNARAVALSPTAELRLETCQQGRSFLDAVRAAWP
CCCCCCEEEEEECCCCCCCCCCHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
HGGLDAAAAHLPPDVAYPVAVGYAAALHGVPRAAVLEAYLFAVTQTLVSAALRIAPIGQT
CCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AGTRVVARLMPAVQALAGDIPTLTLDDLGTATFRADLGSMRHETQYTRLFRS
HHHHHHHHHHHHHHHHHCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA