Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is nagZ [H]
Identifier: 158423356
GI number: 158423356
Start: 1983654
End: 1984682
Strand: Direct
Name: nagZ [H]
Synonym: AZC_1732
Alternate gene names: 158423356
Gene position: 1983654-1984682 (Clockwise)
Preceding gene: 158423355
Following gene: 158423357
Centisome position: 36.94
GC content: 71.04
Gene sequence:
>1029_bases ATGACCTTTGCCCCTTCCGGAACCCGCGCCCTCATTGTCGGCCTCTCCGGCCTCCGCCTCACCGAGGGCGAGCGCGATTT CCTGCGCGCGGTGCGCCCCTGGGGCCTCATCCTGTTCGCCCGCAACGTGGATACGCCCGAGCAGGTAGCCCATCTGGTGG CCGAAGGGCGCGAGGTTCTGGGCTGGCGCGCGCCGGTGCTCATCGATCAGGAAGGCGGCCGGGTGCAGCGCCTGCGCCCG CCGTTCTGGATCGACTATCCCCCCGCCGAGCAGTTCGGCGCGATTTACAAGGCGGACAAGGCCCGCGCGCTGAAGGCGGT CCACCTCAACTCCCGCCTCATCGCCGCCGATCTCGCCGCTCTCGGCATCGACGTGGACTGCCTGCCGGTGGCGGACCTGC GCCTGCCGGAAGGCCATGGCGTCATCGGCAACCGGGCCTATGGAAGCGAGCCGTCCACGGTCGCCGCGCTGGCGAGTGCC GCCGCGCGCGGCCTCATGGAGGGCGGCGTCCTGCCGGTGCTCAAGCACATCCCCGGCCACGGCCGTGCCCCGGCGGACAG CCACGAGCATCTGCCCACCGTCACCGCCAGCCGTTCGGAGCTGGAGGCGACGGACTTTGCCGCCTTCATGTCGCTGAACA CCCTGCCGCTCGGCATGACCGCCCACGTGGTCTATGCTGCCATCGACAAGCACAACCCCGCCACCACCTCGCGCGTCGTG CTGGATGATGTGGTGCGCGGTTTTATCGGCTTCGACGGGGCGCTGATGAGCGATGACCTGTCCATGAAGGCGCTCTCCGG CTCGTTCGCCGAGCGCGCCCGCGCGTCCATCGCCGCCGGCTGCGATCTGCTGCTCCATTGCAACGGCCAGATGGACGAGA TGCGCGCGGTGGCGAGCGAGAGCCCGCTGCTGGCCGGCGCTGCCGCCGAGCGGGCGGCGCGGGCGCTCGCCCGCCGCATC GATCCGCCGGCCACCGATCTCGACGCCATCCGCGACGAGCTGGCCGTGCTGCTCGAACAGCCGGTCTGA
Upstream 100 bases:
>100_bases CCTCCTGTCTTGACGGCCGGGCTTGCCCGGCCGTTTTTCTGTCTTCCCCGCAACTGGCGGGCCGCTTGACGCTCCCCGTG CCCGCCGATAGGCCGCAGTC
Downstream 100 bases:
>100_bases TGGCGACCGGCGCGCCTCCGTCTGAGGAAGAGGGCCCCGCCGGGCCGGGCGCGTCCGATTTCATGGAAGACCAGCTCCCC GCCGCCGGTGAGGGGGCCTT
Product: glycosyl hydrolase
Products: NA
Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MTFAPSGTRALIVGLSGLRLTEGERDFLRAVRPWGLILFARNVDTPEQVAHLVAEGREVLGWRAPVLIDQEGGRVQRLRP PFWIDYPPAEQFGAIYKADKARALKAVHLNSRLIAADLAALGIDVDCLPVADLRLPEGHGVIGNRAYGSEPSTVAALASA AARGLMEGGVLPVLKHIPGHGRAPADSHEHLPTVTASRSELEATDFAAFMSLNTLPLGMTAHVVYAAIDKHNPATTSRVV LDDVVRGFIGFDGALMSDDLSMKALSGSFAERARASIAAGCDLLLHCNGQMDEMRAVASESPLLAGAAAERAARALARRI DPPATDLDAIRDELAVLLEQPV
Sequences:
>Translated_342_residues MTFAPSGTRALIVGLSGLRLTEGERDFLRAVRPWGLILFARNVDTPEQVAHLVAEGREVLGWRAPVLIDQEGGRVQRLRP PFWIDYPPAEQFGAIYKADKARALKAVHLNSRLIAADLAALGIDVDCLPVADLRLPEGHGVIGNRAYGSEPSTVAALASA AARGLMEGGVLPVLKHIPGHGRAPADSHEHLPTVTASRSELEATDFAAFMSLNTLPLGMTAHVVYAAIDKHNPATTSRVV LDDVVRGFIGFDGALMSDDLSMKALSGSFAERARASIAAGCDLLLHCNGQMDEMRAVASESPLLAGAAAERAARALARRI DPPATDLDAIRDELAVLLEQPV >Mature_341_residues TFAPSGTRALIVGLSGLRLTEGERDFLRAVRPWGLILFARNVDTPEQVAHLVAEGREVLGWRAPVLIDQEGGRVQRLRPP FWIDYPPAEQFGAIYKADKARALKAVHLNSRLIAADLAALGIDVDCLPVADLRLPEGHGVIGNRAYGSEPSTVAALASAA ARGLMEGGVLPVLKHIPGHGRAPADSHEHLPTVTASRSELEATDFAAFMSLNTLPLGMTAHVVYAAIDKHNPATTSRVVL DDVVRGFIGFDGALMSDDLSMKALSGSFAERARASIAAGCDLLLHCNGQMDEMRAVASESPLLAGAAAERAARALARRID PPATDLDAIRDELAVLLEQPV
Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787350, Length=311, Percent_Identity=37.9421221864952, Blast_Score=174, Evalue=7e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022956 - InterPro: IPR019800 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3 [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 36371; Mature: 36240
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFAPSGTRALIVGLSGLRLTEGERDFLRAVRPWGLILFARNVDTPEQVAHLVAEGREVL CCCCCCCCEEEEEECCCCEECCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCHHHH GWRAPVLIDQEGGRVQRLRPPFWIDYPPAEQFGAIYKADKARALKAVHLNSRLIAADLAA CCCCCEEEECCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHH LGIDVDCLPVADLRLPEGHGVIGNRAYGSEPSTVAALASAAARGLMEGGVLPVLKHIPGH HCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCC GRAPADSHEHLPTVTASRSELEATDFAAFMSLNTLPLGMTAHVVYAAIDKHNPATTSRVV CCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHH LDDVVRGFIGFDGALMSDDLSMKALSGSFAERARASIAAGCDLLLHCNGQMDEMRAVASE HHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCC SPLLAGAAAERAARALARRIDPPATDLDAIRDELAVLLEQPV CCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TFAPSGTRALIVGLSGLRLTEGERDFLRAVRPWGLILFARNVDTPEQVAHLVAEGREVL CCCCCCCEEEEEECCCCEECCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCHHHH GWRAPVLIDQEGGRVQRLRPPFWIDYPPAEQFGAIYKADKARALKAVHLNSRLIAADLAA CCCCCEEEECCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHH LGIDVDCLPVADLRLPEGHGVIGNRAYGSEPSTVAALASAAARGLMEGGVLPVLKHIPGH HCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCC GRAPADSHEHLPTVTASRSELEATDFAAFMSLNTLPLGMTAHVVYAAIDKHNPATTSRVV CCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHH LDDVVRGFIGFDGALMSDDLSMKALSGSFAERARASIAAGCDLLLHCNGQMDEMRAVASE HHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCC SPLLAGAAAERAARALARRIDPPATDLDAIRDELAVLLEQPV CCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]