Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423156
Identifier: 158423156
GI number: 158423156
Start: 1745953
End: 1746714
Strand: Reverse
Name: 158423156
Synonym: AZC_1532
Alternate gene names: NA
Gene position: 1746714-1745953 (Counterclockwise)
Preceding gene: 158423157
Following gene: 158423155
Centisome position: 32.53
GC content: 66.67
Gene sequence:
>762_bases ATGAGAGCACTCGCGGCGATGCTGCTGGGTCTCGCCCTGGCGTGCGGCGCGGGCCGCGCCCATGCCGAACGGCTGGTGCT CTCGCCGTCGCAGGCGGACGTGCGCATCTCCTCCAATTTCGCGGGCGTCGAGCTCGTGCTGTTCGGCGCCATCGAGGGTG CGACGCCCGGCTCTTATGATGTGGCGGTGACGGTGCGCGGCCCGCACGAGACGGCCGTGACCTGGCGCAAGTCGCGCCTG CTGGGGCTCTGGATCAATACCGACAGCCGCACCTTCATCGACACCCCGTCCTATCTCGCCGTCGCAACCAGTCGTCCGGC GGCGGAGATGGCACCGGCGGAACTGCTGCGCCGGGAGCAGATCGGCCTGTCACGGAACATCTTCATCCAGCGGGTGGGGC CGGACTTCGCCGACGTGGTCACGGACGATCCGTTCCGCGCCGCCTTCCTGCGGATCAAGGAATCGGAAGGGCTCTACGAG GAGCAGCCGCAGGGGGTGAGCTTCCTGTCGCCCAGCGCCTTCCGCGCGACATTCGCCTTGCCGGGACGCGCCCGCACCGG CCGCTATGAGGTGGTGGCAAAGCTGCTGCGGGACGGGGTTCTCGTGGCCGAAGCCCGTACGGCATTCGAAATCCGCAAGG CGGGATTTGAGGCCAGGATGGCCGGATTTGCCGAGAATGAAGGCTTTTTATACGGCCTCGCGGTTGTATTTGCGGCACTT TCCGTCGGGTTCGGGGCCAATGTGGTGTTTCGTCGCGATTAA
Upstream 100 bases:
>100_bases GCCTGCGCGTCGGCTATGACCTCGTGCGCACGCCGGCCGATCCCTATGCCGTCAGCGTTCAGGAGGCCCGTGGCCTCTCG CCGGCACGGAGTGTCCAGCC
Downstream 100 bases:
>100_bases AAAACACGCACCTATCCCAGTCCCCGCTACCGCCGCTCGGTCGCGGAGGAATGCTGAAATGCATGACTTTTCTTTCGCGA CGCTTGAGCTTTGAACGAAT
Product: transmembrane protein precursor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MRALAAMLLGLALACGAGRAHAERLVLSPSQADVRISSNFAGVELVLFGAIEGATPGSYDVAVTVRGPHETAVTWRKSRL LGLWINTDSRTFIDTPSYLAVATSRPAAEMAPAELLRREQIGLSRNIFIQRVGPDFADVVTDDPFRAAFLRIKESEGLYE EQPQGVSFLSPSAFRATFALPGRARTGRYEVVAKLLRDGVLVAEARTAFEIRKAGFEARMAGFAENEGFLYGLAVVFAAL SVGFGANVVFRRD
Sequences:
>Translated_253_residues MRALAAMLLGLALACGAGRAHAERLVLSPSQADVRISSNFAGVELVLFGAIEGATPGSYDVAVTVRGPHETAVTWRKSRL LGLWINTDSRTFIDTPSYLAVATSRPAAEMAPAELLRREQIGLSRNIFIQRVGPDFADVVTDDPFRAAFLRIKESEGLYE EQPQGVSFLSPSAFRATFALPGRARTGRYEVVAKLLRDGVLVAEARTAFEIRKAGFEARMAGFAENEGFLYGLAVVFAAL SVGFGANVVFRRD >Mature_253_residues MRALAAMLLGLALACGAGRAHAERLVLSPSQADVRISSNFAGVELVLFGAIEGATPGSYDVAVTVRGPHETAVTWRKSRL LGLWINTDSRTFIDTPSYLAVATSRPAAEMAPAELLRREQIGLSRNIFIQRVGPDFADVVTDDPFRAAFLRIKESEGLYE EQPQGVSFLSPSAFRATFALPGRARTGRYEVVAKLLRDGVLVAEARTAFEIRKAGFEARMAGFAENEGFLYGLAVVFAAL SVGFGANVVFRRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27342; Mature: 27342
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALAAMLLGLALACGAGRAHAERLVLSPSQADVRISSNFAGVELVLFGAIEGATPGSYD CHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCCEEEECCCCCEEEEEEEEECCCCCCCEE VAVTVRGPHETAVTWRKSRLLGLWINTDSRTFIDTPSYLAVATSRPAAEMAPAELLRREQ EEEEEECCCCHHHEEECCEEEEEEEECCCCEEECCCCEEEEECCCCCHHCCHHHHHHHHH IGLSRNIFIQRVGPDFADVVTDDPFRAAFLRIKESEGLYEEQPQGVSFLSPSAFRATFAL CCCCCEEEEEECCCCHHHHHCCCCHHEEEEEEECCCCCCCCCCCCCEEECCCHHEEEEEC PGRARTGRYEVVAKLLRDGVLVAEARTAFEIRKAGFEARMAGFAENEGFLYGLAVVFAAL CCCCCCCHHHHHHHHHHCCEEEEEHHHHHHHHHCCHHHHHCCCCCCCCEEHHHHHHHHHH SVGFGANVVFRRD HCCCCCEEEEECC >Mature Secondary Structure MRALAAMLLGLALACGAGRAHAERLVLSPSQADVRISSNFAGVELVLFGAIEGATPGSYD CHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCCEEEECCCCCEEEEEEEEECCCCCCCEE VAVTVRGPHETAVTWRKSRLLGLWINTDSRTFIDTPSYLAVATSRPAAEMAPAELLRREQ EEEEEECCCCHHHEEECCEEEEEEEECCCCEEECCCCEEEEECCCCCHHCCHHHHHHHHH IGLSRNIFIQRVGPDFADVVTDDPFRAAFLRIKESEGLYEEQPQGVSFLSPSAFRATFAL CCCCCEEEEEECCCCHHHHHCCCCHHEEEEEEECCCCCCCCCCCCCEEECCCHHEEEEEC PGRARTGRYEVVAKLLRDGVLVAEARTAFEIRKAGFEARMAGFAENEGFLYGLAVVFAAL CCCCCCCHHHHHHHHHHCCEEEEEHHHHHHHHHCCHHHHHCCCCCCCCEEHHHHHHHHHH SVGFGANVVFRRD HCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA