| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is glxC [H]
Identifier: 158423125
GI number: 158423125
Start: 1703933
End: 1704640
Strand: Reverse
Name: glxC [H]
Synonym: AZC_1501
Alternate gene names: 158423125
Gene position: 1704640-1703933 (Counterclockwise)
Preceding gene: 158423126
Following gene: 158423124
Centisome position: 31.75
GC content: 66.1
Gene sequence:
>708_bases ATGACCGCGCCAGCAACCGACCTCACCTTCGATCTCGCCGCCCAGCCGCTGCGCGAGTTGAACGCCGCCCTCCACAAGGC GGGCGTCGAGACCAACGCCCGCCGTTGGCATGTGGCGAACCCCAACGGCCGCCATGCGCTGGCGGTTGGCATCAACGCCC CGCTGGAGGTCGAGATCGACGGCCACGTTGGGTATTACTGCGCCGGCATGAACCAGCAGGCCCGCGTGACCATCAACGGC AATGCGGGCGTCGGCGTCGCCGAGAACATGATGAGCGGCTTCGTCCATGTGAAGGGCGACGCCAGCCAGGCGGCGGGCGC CACCGCCCATGGCGGCACGCTGCTGATCGAGGGCAATGCCTCGGCCCGCTGCGGCATCTCCATGAAGGGCGTGGACATCA TCGTGAAGGGCTCCATCGGCCACATGAGCGCCTTCATGGGGCAGGCCGGCCACCTCATCGTGTTCGGCGATGCGGGCGAT GCGCTGGGCGACAGCCTCTATGAAGCAAAACTCTTCGTGCGCGGCACGGTGAAGAGCCTCGGCGCCGACTGCATCGAGAA GGAGATGCGCGAGGAGCACAAGGCGCTGCTGGCGGAAAAGCTCAGCGCAGCCGGCCTTGCCGGGACCATCGATGTCTCGG AATTCAAGCGCTACGGCTCGGCCCGGCGGCTCTACAACTTCCACATCGACAATGTCGATGCCTATTGA
Upstream 100 bases:
>100_bases TCGGCTCCGAATACCGGGCGCTCGTGGACCTGCCCGGCATCGCGAAGGCCAAGGTCTTCGAACCCGAACCTGCCACCGTC TATTTCTGGGACCGCGCCGC
Downstream 100 bases:
>100_bases GCGGGAGACAACCATGACCGCGCACAACAACGTGCCCCGCACCCTGCCCCGCTTCTCCTCCACCTTCGATCCGCACACGC TGTCCGAGATCCGGCGCGCG
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MTAPATDLTFDLAAQPLRELNAALHKAGVETNARRWHVANPNGRHALAVGINAPLEVEIDGHVGYYCAGMNQQARVTING NAGVGVAENMMSGFVHVKGDASQAAGATAHGGTLLIEGNASARCGISMKGVDIIVKGSIGHMSAFMGQAGHLIVFGDAGD ALGDSLYEAKLFVRGTVKSLGADCIEKEMREEHKALLAEKLSAAGLAGTIDVSEFKRYGSARRLYNFHIDNVDAY
Sequences:
>Translated_235_residues MTAPATDLTFDLAAQPLRELNAALHKAGVETNARRWHVANPNGRHALAVGINAPLEVEIDGHVGYYCAGMNQQARVTING NAGVGVAENMMSGFVHVKGDASQAAGATAHGGTLLIEGNASARCGISMKGVDIIVKGSIGHMSAFMGQAGHLIVFGDAGD ALGDSLYEAKLFVRGTVKSLGADCIEKEMREEHKALLAEKLSAAGLAGTIDVSEFKRYGSARRLYNFHIDNVDAY >Mature_234_residues TAPATDLTFDLAAQPLRELNAALHKAGVETNARRWHVANPNGRHALAVGINAPLEVEIDGHVGYYCAGMNQQARVTINGN AGVGVAENMMSGFVHVKGDASQAAGATAHGGTLLIEGNASARCGISMKGVDIIVKGSIGHMSAFMGQAGHLIVFGDAGDA LGDSLYEAKLFVRGTVKSLGADCIEKEMREEHKALLAEKLSAAGLAGTIDVSEFKRYGSARRLYNFHIDNVDAY
Specific function: Unknown
COG id: COG0070
COG function: function code E; Glutamate synthase domain 3
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fwdC/fmdC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002489 - InterPro: IPR012061 [H]
Pfam domain/function: PF01493 GXGXG [H]
EC number: NA
Molecular weight: Translated: 24676; Mature: 24545
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPATDLTFDLAAQPLRELNAALHKAGVETNARRWHVANPNGRHALAVGINAPLEVEID CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCEEEEEC GHVGYYCAGMNQQARVTINGNAGVGVAENMMSGFVHVKGDASQAAGATAHGGTLLIEGNA CCEEEEEECCCCCEEEEEECCCCCCHHHHHHHCEEEEECCCCHHCCCCCCCCEEEEECCC SARCGISMKGVDIIVKGSIGHMSAFMGQAGHLIVFGDAGDALGDSLYEAKLFVRGTVKSL CCCCCEEECCEEEEEECCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHEEEEEEECHHHC GADCIEKEMREEHKALLAEKLSAAGLAGTIDVSEFKRYGSARRLYNFHIDNVDAY CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCEEEEEEECCCCCC >Mature Secondary Structure TAPATDLTFDLAAQPLRELNAALHKAGVETNARRWHVANPNGRHALAVGINAPLEVEID CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCEEEEEC GHVGYYCAGMNQQARVTINGNAGVGVAENMMSGFVHVKGDASQAAGATAHGGTLLIEGNA CCEEEEEECCCCCEEEEEECCCCCCHHHHHHHCEEEEECCCCHHCCCCCCCCEEEEECCC SARCGISMKGVDIIVKGSIGHMSAFMGQAGHLIVFGDAGDALGDSLYEAKLFVRGTVKSL CCCCCEEECCEEEEEECCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHEEEEEEECHHHC GADCIEKEMREEHKALLAEKLSAAGLAGTIDVSEFKRYGSARRLYNFHIDNVDAY CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]