| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423108
Identifier: 158423108
GI number: 158423108
Start: 1685305
End: 1685988
Strand: Reverse
Name: 158423108
Synonym: AZC_1484
Alternate gene names: NA
Gene position: 1685988-1685305 (Counterclockwise)
Preceding gene: 158423109
Following gene: 158423105
Centisome position: 31.4
GC content: 66.81
Gene sequence:
>684_bases TTGAGGTCGATCGGCCGCGCGCCGGGGGCGGTCTGGTCTGATCGCGCCCGAGGATTTCAAGGAGAGACCACCGTGCGCCT GTTCCCGCGTCTGCTGTCGAGTGCCCTTCCCGCCACCACGCTTCTCGCCGCCACACTCGGCACCGCGACGGGCGTCATGG CCGGCCCCCTGCTCTCCGACATGACCGACCGCACCCTCTCCTGCGCCATCAGCCCGGCCCTCTATATCGACGCCAAGGGC GAGACGGTAACCACCTTCGTGTTCCCGGATGCCGGCGGCAGCTGGATCGACGTCACGCTGCCGCTCACCTCGCCCGTGCT CGCCAGCAGCAGCCAGGACGAATTCACGCTGGTCATTCCGCCCCAGAAAGGCCAGGCCAAGGGCGAGCAGATCGCCTTCA TCCGCACCTTCGAGAAGCCAGAAGGCGGCGGCAAGAACGCCAAGCCCGTGCCTGTCATCTCCATGCATGTGGACGGCGAC ACGGTGGGGGATGCATGCGTGGCCGAGAAGGGGCGCCAGAAATTCCTCAAGAACCGCTTCAATTCGGCCCGCGAGAACAG CTGCGGCAACGATCCCACCCCGGCCTGCGAGAAGCTGCTGGCCAAGACCTGCGGGCTGGAGATCACGCAGGACTGCGTCG CCAAGCTCCAGCCGGAACTGGCCAAGGCCAGAAACCGGCGCTGA
Upstream 100 bases:
>100_bases CATGATCTGGGCGAGAATGCCATGCGCATCTCCAGCCTCATGGCCGATCTCACCGCCGAGCGCCGCAAGCGCTGACCGGC GCCGAACGCCCCCATCAAAT
Downstream 100 bases:
>100_bases ACGCGGGCCGTCAGAACAGGCTGGGCTGGGCCACCGGAGACGGCGACCCGGCCGGCAGGCCCGTCACCTCGACGAGAAGA TCGGCATCGTCATTGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MRSIGRAPGAVWSDRARGFQGETTVRLFPRLLSSALPATTLLAATLGTATGVMAGPLLSDMTDRTLSCAISPALYIDAKG ETVTTFVFPDAGGSWIDVTLPLTSPVLASSSQDEFTLVIPPQKGQAKGEQIAFIRTFEKPEGGGKNAKPVPVISMHVDGD TVGDACVAEKGRQKFLKNRFNSARENSCGNDPTPACEKLLAKTCGLEITQDCVAKLQPELAKARNRR
Sequences:
>Translated_227_residues MRSIGRAPGAVWSDRARGFQGETTVRLFPRLLSSALPATTLLAATLGTATGVMAGPLLSDMTDRTLSCAISPALYIDAKG ETVTTFVFPDAGGSWIDVTLPLTSPVLASSSQDEFTLVIPPQKGQAKGEQIAFIRTFEKPEGGGKNAKPVPVISMHVDGD TVGDACVAEKGRQKFLKNRFNSARENSCGNDPTPACEKLLAKTCGLEITQDCVAKLQPELAKARNRR >Mature_227_residues MRSIGRAPGAVWSDRARGFQGETTVRLFPRLLSSALPATTLLAATLGTATGVMAGPLLSDMTDRTLSCAISPALYIDAKG ETVTTFVFPDAGGSWIDVTLPLTSPVLASSSQDEFTLVIPPQKGQAKGEQIAFIRTFEKPEGGGKNAKPVPVISMHVDGD TVGDACVAEKGRQKFLKNRFNSARENSCGNDPTPACEKLLAKTCGLEITQDCVAKLQPELAKARNRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24106; Mature: 24106
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSIGRAPGAVWSDRARGFQGETTVRLFPRLLSSALPATTLLAATLGTATGVMAGPLLSD CCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH MTDRTLSCAISPALYIDAKGETVTTFVFPDAGGSWIDVTLPLTSPVLASSSQDEFTLVIP HHHHHHHEEECCEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCHHCCCCCCCEEEEEC PQKGQAKGEQIAFIRTFEKPEGGGKNAKPVPVISMHVDGDTVGDACVAEKGRQKFLKNRF CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH NSARENSCGNDPTPACEKLLAKTCGLEITQDCVAKLQPELAKARNRR HHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHCCCC >Mature Secondary Structure MRSIGRAPGAVWSDRARGFQGETTVRLFPRLLSSALPATTLLAATLGTATGVMAGPLLSD CCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH MTDRTLSCAISPALYIDAKGETVTTFVFPDAGGSWIDVTLPLTSPVLASSSQDEFTLVIP HHHHHHHEEECCEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCHHCCCCCCCEEEEEC PQKGQAKGEQIAFIRTFEKPEGGGKNAKPVPVISMHVDGDTVGDACVAEKGRQKFLKNRF CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH NSARENSCGNDPTPACEKLLAKTCGLEITQDCVAKLQPELAKARNRR HHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA