| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is uspA
Identifier: 158423095
GI number: 158423095
Start: 1670183
End: 1671016
Strand: Reverse
Name: uspA
Synonym: AZC_1471
Alternate gene names: NA
Gene position: 1671016-1670183 (Counterclockwise)
Preceding gene: 158423098
Following gene: 158423093
Centisome position: 31.12
GC content: 68.94
Gene sequence:
>834_bases ATGATCCGGGACATTCTGGTCAACCTTTCCCTCGGCAGCGAGCGCGATCCCGCGGCCGTTTATGCCGCAAGCCTTGCCGC CGCCTGCAAGGCGCACATCACCGGCCTTGCGGTGAGCTACGAGATTGACGTGCCGCCCTTCTACATGGGCGCCCTCCCCA CCGACTTCATCGACCAGCAGATCCGCGAGAATGAAGCGGCGGCGACCACGGCTGCCGGCGCCTTCACGGCGCTCGCCCGC GAGCACGGCCTCTCCTACGACGTGCGCACCCTCTCGGGCTCGCTCGGCGATGCGGCCGCGGCGGTGGGCGACCTGTCCCG CCTCTATGACCTCACCGTGGTCGCCCAGCCCGATCCGGACCGCCCCGGCCCGGAAGAGGTGCTGGCGGAATCCGCGCTCA TGGATTCGGGCCGCGGCGTGCTGGTGGTCCCTTATGTGCAGAAGCCGCCCTTCTCGCTCTCGCGGGTCGTGGTGGCCTGG GACGGAAGCCGTGCCAGCGCCCGTGCGCTCGCCGAAAGCCTGCCGCTGCTCCATATGGCCGACAGCCGCGTGATCTTCTC CGTGCGCCGCTCGGAGAACGAAGAAGCGACGCCCAACGCCGCCGATCTGGAGCGCCATCTGGCGCACCACGGCCTGTCGG CTGAACTGCGCCACCTCACAATCGGCTCCGGCGAAAGCATTTCCTCCGCCATCCTGAATGAAGTGTCCGACCAGGGCGCC GACCTCGTGGTGATGGGGGGCTACGGCCATTCGCGCGTGCGCGAACTGGTCTTCGGCGGCGTGACCCGCGACATCCTCGG CTCCATGACGGCGCCGGTGCTGCTCGCCCACTGA
Upstream 100 bases:
>100_bases CTTTTGAGAAACCGATATTTGCGCCGCGTCAAGGCGGTGTTTTGATCGCTCTTTACGGTAAAGTCGTGTCGCTAGACGCG GTTTTGAGAGAGCCTTCCCC
Downstream 100 bases:
>100_bases GGCAGCAAACGAAAAGCGGCGCCGTCCCGAGGGAGGCGCCGCTCTTTTTTCAGGCCAAAGGCGCGCGAAGAGGATCAGTC CTCCTCGTCCTCGCTCTTGC
Product: universal stress protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein; Universal Stress Protein UspA; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; UspA-Like Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Response Protein; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MIRDILVNLSLGSERDPAAVYAASLAAACKAHITGLAVSYEIDVPPFYMGALPTDFIDQQIRENEAAATTAAGAFTALAR EHGLSYDVRTLSGSLGDAAAAVGDLSRLYDLTVVAQPDPDRPGPEEVLAESALMDSGRGVLVVPYVQKPPFSLSRVVVAW DGSRASARALAESLPLLHMADSRVIFSVRRSENEEATPNAADLERHLAHHGLSAELRHLTIGSGESISSAILNEVSDQGA DLVVMGGYGHSRVRELVFGGVTRDILGSMTAPVLLAH
Sequences:
>Translated_277_residues MIRDILVNLSLGSERDPAAVYAASLAAACKAHITGLAVSYEIDVPPFYMGALPTDFIDQQIRENEAAATTAAGAFTALAR EHGLSYDVRTLSGSLGDAAAAVGDLSRLYDLTVVAQPDPDRPGPEEVLAESALMDSGRGVLVVPYVQKPPFSLSRVVVAW DGSRASARALAESLPLLHMADSRVIFSVRRSENEEATPNAADLERHLAHHGLSAELRHLTIGSGESISSAILNEVSDQGA DLVVMGGYGHSRVRELVFGGVTRDILGSMTAPVLLAH >Mature_277_residues MIRDILVNLSLGSERDPAAVYAASLAAACKAHITGLAVSYEIDVPPFYMGALPTDFIDQQIRENEAAATTAAGAFTALAR EHGLSYDVRTLSGSLGDAAAAVGDLSRLYDLTVVAQPDPDRPGPEEVLAESALMDSGRGVLVVPYVQKPPFSLSRVVVAW DGSRASARALAESLPLLHMADSRVIFSVRRSENEEATPNAADLERHLAHHGLSAELRHLTIGSGESISSAILNEVSDQGA DLVVMGGYGHSRVRELVFGGVTRDILGSMTAPVLLAH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29234; Mature: 29234
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRDILVNLSLGSERDPAAVYAASLAAACKAHITGLAVSYEIDVPPFYMGALPTDFIDQQ CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHCCCCHHHHHHH IRENEAAATTAAGAFTALAREHGLSYDVRTLSGSLGDAAAAVGDLSRLYDLTVVAQPDPD HHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCC RPGPEEVLAESALMDSGRGVLVVPYVQKPPFSLSRVVVAWDGSRASARALAESLPLLHMA CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHCCEEEEC DSRVIFSVRRSENEEATPNAADLERHLAHHGLSAELRHLTIGSGESISSAILNEVSDQGA CCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC DLVVMGGYGHSRVRELVFGGVTRDILGSMTAPVLLAH CEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCEEECC >Mature Secondary Structure MIRDILVNLSLGSERDPAAVYAASLAAACKAHITGLAVSYEIDVPPFYMGALPTDFIDQQ CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHCCCCHHHHHHH IRENEAAATTAAGAFTALAREHGLSYDVRTLSGSLGDAAAAVGDLSRLYDLTVVAQPDPD HHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCC RPGPEEVLAESALMDSGRGVLVVPYVQKPPFSLSRVVVAWDGSRASARALAESLPLLHMA CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHCCEEEEC DSRVIFSVRRSENEEATPNAADLERHLAHHGLSAELRHLTIGSGESISSAILNEVSDQGA CCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC DLVVMGGYGHSRVRELVFGGVTRDILGSMTAPVLLAH CEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA