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The map label for this gene is yagR [H]

Identifier: 158423024

GI number: 158423024

Start: 1590925

End: 1593135

Strand: Reverse

Name: yagR [H]

Synonym: AZC_1400

Alternate gene names: 158423024

Gene position: 1593135-1590925 (Counterclockwise)

Preceding gene: 158423025

Following gene: 158423023

Centisome position: 29.67

GC content: 67.89

Gene sequence:

>2211_bases
ATGAAATTCGAGACGCCCGCAACCACCAATCCCATCGACCGCCTGCGCGTGGTGGGCCAGCCGCTCGACCGCATCGACGG
TCCGCTGAAGACCACCGGAACCGCGCCCTATGCCTATGAGCGGCACGATGTGGCGGCCGATCCCGCCTATGGCTATGTGA
TCGGCGCTGGCATCGCCAAGGGGCGCATCACCCGCATGGATATCGAGGCGGCCCGACGCGCGCCGGGTGTCATCGCCATC
GTGACGGCCGAGACCGCCGGGAAGCTCGGCAAGGGCAAGCACAATACCGCGCGCCTGCTGGCCGGGCCCCACATCGAACA
TTACCACCAGGCCGTCGCGCTGGTGGTCGCGGAGACGTTCGAGCAGGCCCGTGCAGCGGCCGGGCGAGTCCGGATCGACT
ATGCCGCCGAGCCGGGGCGCTTCGATCTCGAAGCCGCGCGCTGGTCCGCCGCCAAGCCCTCGGACGAGGCGACGGGCGGT
GCCGCCGATACCAAGGTCGGCGACTTCGCCCGCGCCTTTGACGCGGCCACGGTGCGCCTGGACGAGACCTACAGCACGCC
GGACGAGACCCACGCCATGATGGAGCCGCATGCTTCGCTGGCGCGGTGGGAAGGCGACCGGCTGACCGTCTGGACCTCTA
ACCAGATGATCGGATGGGCCCATACGGATCTGGCCGAGACCCTCGGCGTACCGCCCGAGAAGGTACGCGTAATCTCACCC
TTCATCGGCGGCGGCTTCGGCGGCAAGCTGTTCCTGCGCGCCGACATTGTGCTCGCAGCACTCGGCGCGCGGGCGGCGGG
ACGGCCGGTGAAGGTGGCGCTCCATCGCCCGCTGATGATCAACAACACAACCCACCGTCCGGCCACCATCCAGCGTATCC
GCATCGGCGCAGAGCGGGATGGCATGATCACCGCCATCGCCCACGAAAGCTGGTCCGGCGACCTGGAGGGCGGCGGACCG
GAAGTAGCGGTGAACCAGACACGCCTCCTGTATGCGGGCGCCAATCGCCTCACCTCCATGCGTCTCGCTAGTCTCGACCT
GCCGGAAGGCAACTCCATGCGCGCGCCGGGCGAAGCTCCGGGCATGATGGCGCTGGAGATCGCCATGGACGAAATGGCCG
AAAAGCTCGGCATCGACCCGGTGGACTTCCGCATCCGCAACGACACGCAGAAAGATCCCGAAAAGCCCGGCCGGCCGTTC
TCCGCCCGCCCCTTCGTGGAGTGCCTGCGGCTCGGCGCGGAACGCTTCGGCTGGAGCAGCCGCAATCCCGTCCCCGGGCA
GCGGCGGGAGGGTCGTTGGCTGATCGGAGCCGGCATGGCGGGCGCTTTTCGCAACAACCTGCTCGTGAAGTCGGCCGCCC
GCGTGCGCCTGTCCGCCGATGGCCGGGTCACGGTCGAGACCGACATGACCGACATCGGCACCGGCAGCTACACCATCATC
GCCCAGACCGCCGCGGAGATGATGGGCGTCTCCCTCGAGCAGGTGGAGGTGCGTCTCGGAGATTCCGCCTATCCCGTCTC
GGCGGGGTCCGGCGGCCAGTTCGGCGCCAACAATGCCACCGCTGGCGTCTATGCCGCCTGCGTGAAACTTCGCGAGGCGG
TGGCCCGGAAGCTCGGCCTAAATGCCGCGGATGCCGAGTTCGTCCATGGCACGGTGCGCAGCGGCGAGCGGTCCATTCCG
CTGGCGCTCGCGGCCTCAAGCGGGGAGCTCACCGGCGAGGACGGCATCGAATATGGCGACCTTCACAAGACCTACCAGCA
GTCCACCTTCGGCAGCCACTTCGTTGAAGTGGCGGTGGACGCGGCGACGGGCGAAGCCCGCATCCGCCGCATGCTGGCGG
TCTGCGCGGCCGGGCGCATCCTCAACCCGAAATCCGCCCGCAGCCAGGTGATCGGAGCCATGACCATGGGCGCAGGCGCG
GCCTTGATGGAGGAACTGGCCGTCGACAAGAAGCGCGGTTTCTTCGTCAATCACGACCTCGCCGGATATGAGGTGCCCGT
GCATGCGGATATCCCGCACCAGGAGGTGATCTTCCTTGATGAGACCGATCCGATCTCCTCGCCCATGAAGGCGAAGGGCG
TCGGGGAACTGGGCATCTGCGGCGTCGGCGCCGCGGTTGCCAACGCGCTCTACAATGCGACGGGTGTGCGCGTGCGCAAC
TACCCGATCACGCTCGACAAATATCTCGACCGGCTGCCGGACGTCGCCTGA

Upstream 100 bases:

>100_bases
CTGCTCGCCGACGCGCGGCCGACGCGGGACAACGCCTTCAAGGTCGTTCTGGTGGAGCGCACGCTCGGTGCGGTGCTCAA
CGAGGCAAGGGGCTGAACCC

Downstream 100 bases:

>100_bases
TCTGCCGTCGTCTTCCGCCTCCTGTGCATGCGTGCAGGAGGCGTGAGCCAAGCAGTTTCAGATAAAAATTGGGGCCACGC
CGAGCAAAGCGTGATACAAG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 736; Mature: 736

Protein sequence:

>736_residues
MKFETPATTNPIDRLRVVGQPLDRIDGPLKTTGTAPYAYERHDVAADPAYGYVIGAGIAKGRITRMDIEAARRAPGVIAI
VTAETAGKLGKGKHNTARLLAGPHIEHYHQAVALVVAETFEQARAAAGRVRIDYAAEPGRFDLEAARWSAAKPSDEATGG
AADTKVGDFARAFDAATVRLDETYSTPDETHAMMEPHASLARWEGDRLTVWTSNQMIGWAHTDLAETLGVPPEKVRVISP
FIGGGFGGKLFLRADIVLAALGARAAGRPVKVALHRPLMINNTTHRPATIQRIRIGAERDGMITAIAHESWSGDLEGGGP
EVAVNQTRLLYAGANRLTSMRLASLDLPEGNSMRAPGEAPGMMALEIAMDEMAEKLGIDPVDFRIRNDTQKDPEKPGRPF
SARPFVECLRLGAERFGWSSRNPVPGQRREGRWLIGAGMAGAFRNNLLVKSAARVRLSADGRVTVETDMTDIGTGSYTII
AQTAAEMMGVSLEQVEVRLGDSAYPVSAGSGGQFGANNATAGVYAACVKLREAVARKLGLNAADAEFVHGTVRSGERSIP
LALAASSGELTGEDGIEYGDLHKTYQQSTFGSHFVEVAVDAATGEARIRRMLAVCAAGRILNPKSARSQVIGAMTMGAGA
ALMEELAVDKKRGFFVNHDLAGYEVPVHADIPHQEVIFLDETDPISSPMKAKGVGELGICGVGAAVANALYNATGVRVRN
YPITLDKYLDRLPDVA

Sequences:

>Translated_736_residues
MKFETPATTNPIDRLRVVGQPLDRIDGPLKTTGTAPYAYERHDVAADPAYGYVIGAGIAKGRITRMDIEAARRAPGVIAI
VTAETAGKLGKGKHNTARLLAGPHIEHYHQAVALVVAETFEQARAAAGRVRIDYAAEPGRFDLEAARWSAAKPSDEATGG
AADTKVGDFARAFDAATVRLDETYSTPDETHAMMEPHASLARWEGDRLTVWTSNQMIGWAHTDLAETLGVPPEKVRVISP
FIGGGFGGKLFLRADIVLAALGARAAGRPVKVALHRPLMINNTTHRPATIQRIRIGAERDGMITAIAHESWSGDLEGGGP
EVAVNQTRLLYAGANRLTSMRLASLDLPEGNSMRAPGEAPGMMALEIAMDEMAEKLGIDPVDFRIRNDTQKDPEKPGRPF
SARPFVECLRLGAERFGWSSRNPVPGQRREGRWLIGAGMAGAFRNNLLVKSAARVRLSADGRVTVETDMTDIGTGSYTII
AQTAAEMMGVSLEQVEVRLGDSAYPVSAGSGGQFGANNATAGVYAACVKLREAVARKLGLNAADAEFVHGTVRSGERSIP
LALAASSGELTGEDGIEYGDLHKTYQQSTFGSHFVEVAVDAATGEARIRRMLAVCAAGRILNPKSARSQVIGAMTMGAGA
ALMEELAVDKKRGFFVNHDLAGYEVPVHADIPHQEVIFLDETDPISSPMKAKGVGELGICGVGAAVANALYNATGVRVRN
YPITLDKYLDRLPDVA
>Mature_736_residues
MKFETPATTNPIDRLRVVGQPLDRIDGPLKTTGTAPYAYERHDVAADPAYGYVIGAGIAKGRITRMDIEAARRAPGVIAI
VTAETAGKLGKGKHNTARLLAGPHIEHYHQAVALVVAETFEQARAAAGRVRIDYAAEPGRFDLEAARWSAAKPSDEATGG
AADTKVGDFARAFDAATVRLDETYSTPDETHAMMEPHASLARWEGDRLTVWTSNQMIGWAHTDLAETLGVPPEKVRVISP
FIGGGFGGKLFLRADIVLAALGARAAGRPVKVALHRPLMINNTTHRPATIQRIRIGAERDGMITAIAHESWSGDLEGGGP
EVAVNQTRLLYAGANRLTSMRLASLDLPEGNSMRAPGEAPGMMALEIAMDEMAEKLGIDPVDFRIRNDTQKDPEKPGRPF
SARPFVECLRLGAERFGWSSRNPVPGQRREGRWLIGAGMAGAFRNNLLVKSAARVRLSADGRVTVETDMTDIGTGSYTII
AQTAAEMMGVSLEQVEVRLGDSAYPVSAGSGGQFGANNATAGVYAACVKLREAVARKLGLNAADAEFVHGTVRSGERSIP
LALAASSGELTGEDGIEYGDLHKTYQQSTFGSHFVEVAVDAATGEARIRRMLAVCAAGRILNPKSARSQVIGAMTMGAGA
ALMEELAVDKKRGFFVNHDLAGYEVPVHADIPHQEVIFLDETDPISSPMKAKGVGELGICGVGAAVANALYNATGVRVRN
YPITLDKYLDRLPDVA

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI71773480, Length=739, Percent_Identity=24.2219215155616, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI91823271, Length=709, Percent_Identity=24.1184767277856, Blast_Score=133, Evalue=7e-31,
Organism=Escherichia coli, GI1786478, Length=735, Percent_Identity=68.0272108843537, Blast_Score=1009, Evalue=0.0,
Organism=Escherichia coli, GI1789230, Length=749, Percent_Identity=31.6421895861148, Blast_Score=261, Evalue=8e-71,
Organism=Escherichia coli, GI1789246, Length=811, Percent_Identity=26.7570900123305, Blast_Score=200, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17540638, Length=727, Percent_Identity=23.6588720770289, Blast_Score=152, Evalue=5e-37,
Organism=Drosophila melanogaster, GI24647199, Length=724, Percent_Identity=24.0331491712707, Blast_Score=132, Evalue=7e-31,
Organism=Drosophila melanogaster, GI24647195, Length=751, Percent_Identity=24.5006657789614, Blast_Score=123, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24647201, Length=739, Percent_Identity=24.2219215155616, Blast_Score=122, Evalue=8e-28,
Organism=Drosophila melanogaster, GI24647197, Length=691, Percent_Identity=24.8914616497829, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI17737937, Length=699, Percent_Identity=24.0343347639485, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24647193, Length=729, Percent_Identity=23.8683127572016, Blast_Score=110, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 78483; Mature: 78483

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFETPATTNPIDRLRVVGQPLDRIDGPLKTTGTAPYAYERHDVAADPAYGYVIGAGIAK
CCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEEEECCCCC
GRITRMDIEAARRAPGVIAIVTAETAGKLGKGKHNTARLLAGPHIEHYHQAVALVVAETF
CCEEEEEHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
EQARAAAGRVRIDYAAEPGRFDLEAARWSAAKPSDEATGGAADTKVGDFARAFDAATVRL
HHHHHHCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEE
DETYSTPDETHAMMEPHASLARWEGDRLTVWTSNQMIGWAHTDLAETLGVPPEKVRVISP
CCCCCCCCHHHHHHCCCHHHHHCCCCEEEEEECCCEEEEEHHHHHHHHCCCHHHEEEECH
FIGGGFGGKLFLRADIVLAALGARAAGRPVKVALHRPLMINNTTHRPATIQRIRIGAERD
HHCCCCCCEEEEEHHHHHHHHCCCCCCCCEEEEEECCEEECCCCCCCCEEEEEEECCCCC
GMITAIAHESWSGDLEGGGPEVAVNQTRLLYAGANRLTSMRLASLDLPEGNSMRAPGEAP
CEEEEEEECCCCCCCCCCCCEEEECCEEEEEECCCHHHHEEEEEECCCCCCCCCCCCCCC
GMMALEIAMDEMAEKLGIDPVDFRIRNDTQKDPEKPGRPFSARPFVECLRLGAERFGWSS
CCEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
RNPVPGQRREGRWLIGAGMAGAFRNNLLVKSAARVRLSADGRVTVETDMTDIGTGSYTII
CCCCCCCCCCCCEEEECCCCHHHHCCEEEECCEEEEEECCCEEEEEECCCCCCCCCEEEE
AQTAAEMMGVSLEQVEVRLGDSAYPVSAGSGGQFGANNATAGVYAACVKLREAVARKLGL
EHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
NAADAEFVHGTVRSGERSIPLALAASSGELTGEDGIEYGDLHKTYQQSTFGSHFVEVAVD
CCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEE
AATGEARIRRMLAVCAAGRILNPKSARSQVIGAMTMGAGAALMEELAVDKKRGFFVNHDL
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEECCC
AGYEVPVHADIPHQEVIFLDETDPISSPMKAKGVGELGICGVGAAVANALYNATGVRVRN
CCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC
YPITLDKYLDRLPDVA
CCEEHHHHHHHCCCCC
>Mature Secondary Structure
MKFETPATTNPIDRLRVVGQPLDRIDGPLKTTGTAPYAYERHDVAADPAYGYVIGAGIAK
CCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEEEECCCCC
GRITRMDIEAARRAPGVIAIVTAETAGKLGKGKHNTARLLAGPHIEHYHQAVALVVAETF
CCEEEEEHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
EQARAAAGRVRIDYAAEPGRFDLEAARWSAAKPSDEATGGAADTKVGDFARAFDAATVRL
HHHHHHCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEE
DETYSTPDETHAMMEPHASLARWEGDRLTVWTSNQMIGWAHTDLAETLGVPPEKVRVISP
CCCCCCCCHHHHHHCCCHHHHHCCCCEEEEEECCCEEEEEHHHHHHHHCCCHHHEEEECH
FIGGGFGGKLFLRADIVLAALGARAAGRPVKVALHRPLMINNTTHRPATIQRIRIGAERD
HHCCCCCCEEEEEHHHHHHHHCCCCCCCCEEEEEECCEEECCCCCCCCEEEEEEECCCCC
GMITAIAHESWSGDLEGGGPEVAVNQTRLLYAGANRLTSMRLASLDLPEGNSMRAPGEAP
CEEEEEEECCCCCCCCCCCCEEEECCEEEEEECCCHHHHEEEEEECCCCCCCCCCCCCCC
GMMALEIAMDEMAEKLGIDPVDFRIRNDTQKDPEKPGRPFSARPFVECLRLGAERFGWSS
CCEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
RNPVPGQRREGRWLIGAGMAGAFRNNLLVKSAARVRLSADGRVTVETDMTDIGTGSYTII
CCCCCCCCCCCCEEEECCCCHHHHCCEEEECCEEEEEECCCEEEEEECCCCCCCCCEEEE
AQTAAEMMGVSLEQVEVRLGDSAYPVSAGSGGQFGANNATAGVYAACVKLREAVARKLGL
EHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
NAADAEFVHGTVRSGERSIPLALAASSGELTGEDGIEYGDLHKTYQQSTFGSHFVEVAVD
CCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEE
AATGEARIRRMLAVCAAGRILNPKSARSQVIGAMTMGAGAALMEELAVDKKRGFFVNHDL
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEECCC
AGYEVPVHADIPHQEVIFLDETDPISSPMKAKGVGELGICGVGAAVANALYNATGVRVRN
CCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC
YPITLDKYLDRLPDVA
CCEEHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]