Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340514
Identifier: 158340514
GI number: 158340514
Start: 62567
End: 63160
Strand: Direct
Name: 158340514
Synonym: AM1_C0059
Alternate gene names: NA
Gene position: 62567-63160 (Clockwise)
Preceding gene: 158340513
Following gene: 158340516
Centisome position: 22.91
GC content: 40.91
Gene sequence:
>594_bases TTGTCTCTCAATAGCTATAGTTGTGAAACTGAACTTATGGACTTCAAAATTTACACCCTTGAGACAGCTCCAGATGAGTC TAAGGGAGCACTCCAACAGGCTGAACAAACGTTCAAATTTATCCCAAATCTGGAAGGAATCCTTGCAGAATCTCCAGCTA CCTTAAAAAGTGGTATGGCCCTTTGGGATCTATTCGAGACAACCAGTTTTACTCCCATTGAGCAACAAGTTATTTATCTC ACTGCTAACTATGAGCACGAATGTAGTTATTGCGTGGCTGCACACTCTGGTTTAGCCAAGATGGTTGGAATGTCTGCAGA AGATATTGAGGCAATTCGCAATGGCAAACCCCTAATAGACCAAAAGTTGCAGGCACTACGACATTTCACCAAAAGAATGA TTTCAGAAAGAGGTTGGGTAGGTGATGAGGAGATTGAAGAATTTTTGGCAGCAGGGTATACCCGGCAACAAATTTTAGAA GTGATTTTAGGTATTGCCGTAAAAGTCATTCACAATTACACAAATCATATTGCTAAAACTCCTTTAGATAAGGCTTTTCA GCCCTATACATGGTCAAAGCCTTCTGTCCCTTAG
Upstream 100 bases:
>100_bases ATCTTTCGCTGAGTTTCATTGAGTTTTTGATTCATTTCTGATTAAGTAGACAAGTTTGTCTCCATAGAGTTACGATATCA CCAACCGCAGGGAGACAGAC
Downstream 100 bases:
>100_bases AAAGCCATCAACATAACATGCTATATGATGCAGTTTGTTGAATTAGAAACCCCAATCTTTAACCTCAACCCCAGCCCCCC GACTGCCCAATCCTGACACT
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; Peroxidase-Related; Alkylhydroperoxidase AhpD Domain Protein; Alkylhydroperoxidase AhpD Family Core Domain Protein; Macrophage Infectivity Potentiator-Related Protein; Peroxidase; Carboxymuconolactone Decarboxylase Family Protein; Alkylhydroperoxidase-Like Protein AhpD Family; MIP-(Macrophage Infectivity Potentiator)-Like Protein; 24 KDa Macrophage-Induced Protein; AhpD-Like Alkylhydroperoxidase; Carboxymuconolactone Decarboxylase Family; 4-Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase AhpD; Macrophage Infectivity Potentiator Protein; Antioxydant Protein; Alkylhydroperoxidase-Like Protein; Mip Protein; Alkylhydroperoxidase AhpD Family Protein; AhpD Family Alkylhydroperoxidase; Alkylhydroperoxidase AhpD Family Core Domain Protein MED; Peroxidase-Like Protein; Alkylhydroperoxidase Like Protein AhpD Family Protein; Ypothetical Protein SMU.
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MSLNSYSCETELMDFKIYTLETAPDESKGALQQAEQTFKFIPNLEGILAESPATLKSGMALWDLFETTSFTPIEQQVIYL TANYEHECSYCVAAHSGLAKMVGMSAEDIEAIRNGKPLIDQKLQALRHFTKRMISERGWVGDEEIEEFLAAGYTRQQILE VILGIAVKVIHNYTNHIAKTPLDKAFQPYTWSKPSVP
Sequences:
>Translated_197_residues MSLNSYSCETELMDFKIYTLETAPDESKGALQQAEQTFKFIPNLEGILAESPATLKSGMALWDLFETTSFTPIEQQVIYL TANYEHECSYCVAAHSGLAKMVGMSAEDIEAIRNGKPLIDQKLQALRHFTKRMISERGWVGDEEIEEFLAAGYTRQQILE VILGIAVKVIHNYTNHIAKTPLDKAFQPYTWSKPSVP >Mature_196_residues SLNSYSCETELMDFKIYTLETAPDESKGALQQAEQTFKFIPNLEGILAESPATLKSGMALWDLFETTSFTPIEQQVIYLT ANYEHECSYCVAAHSGLAKMVGMSAEDIEAIRNGKPLIDQKLQALRHFTKRMISERGWVGDEEIEEFLAAGYTRQQILEV ILGIAVKVIHNYTNHIAKTPLDKAFQPYTWSKPSVP
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22185; Mature: 22053
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNSYSCETELMDFKIYTLETAPDESKGALQQAEQTFKFIPNLEGILAESPATLKSGMA CCCCCCCCCHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHCHH LWDLFETTSFTPIEQQVIYLTANYEHECSYCVAAHSGLAKMVGMSAEDIEAIRNGKPLID HHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHH QKLQALRHFTKRMISERGWVGDEEIEEFLAAGYTRQQILEVILGIAVKVIHNYTNHIAKT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC PLDKAFQPYTWSKPSVP CHHHCCCCCCCCCCCCC >Mature Secondary Structure SLNSYSCETELMDFKIYTLETAPDESKGALQQAEQTFKFIPNLEGILAESPATLKSGMA CCCCCCCCHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHCHH LWDLFETTSFTPIEQQVIYLTANYEHECSYCVAAHSGLAKMVGMSAEDIEAIRNGKPLID HHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHH QKLQALRHFTKRMISERGWVGDEEIEEFLAAGYTRQQILEVILGIAVKVIHNYTNHIAKT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC PLDKAFQPYTWSKPSVP CHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA