Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340381
Identifier: 158340381
GI number: 158340381
Start: 219439
End: 219891
Strand: Direct
Name: 158340381
Synonym: AM1_C0308
Alternate gene names: NA
Gene position: 219439-219891 (Clockwise)
Preceding gene: 158340379
Following gene: 158340386
Centisome position: 80.34
GC content: 42.38
Gene sequence:
>453_bases ATGCACTATGCTATGTTGTTCCTTGAGCAAGGGACAAATGAATTTCATTGTCAAAGGCAGTTTTCAGGTATGGGAATCGC CTTTTTCAAGAAATACCTCGGTAGCTCTATGACCTGGAATGTTGGGAATCCACCTAGTAAGGGAACCCTGAGCACATGTC TTATTCATCAGGTTTCTAAAGGTAGCTTTCTGAGTGAGCTGCCTTTTTTATGGCTTAAATCGCCCTCAGAGCATTTAGGC TGTGTTAAATTCACAAGTAATTATGAATGGCAATTATTGCTGGGCAATCTCAATCACCACAGGCTGCCCTTTCCCTATCC AAAGGGAGTCCAAGACCTTTACCCCAGCTTTGTCATTATTTATCTTAATCAGGGTATCCTCACCTTTAGAAATGTGAGAG AGGCTATCCACTCTCACAGCCTTTTCAGAACAGATTTTAGACAGCTTCGGTAG
Upstream 100 bases:
>100_bases TCCTATTACTTCGATTGACTCAAGACCGCCCTATCTGCAAGCTTCTTTGTGCTTCAACTCCAAGTAGGACTTAATGACAT CGCCGTGGCAGGCCAGGGGA
Downstream 100 bases:
>100_bases CAAGAAGCTGTCTTTTTTAATCTAGCCTCATCACTTTCCCTCACTCGCTGATTTACAGCGGATATTCTTAGAGCCTTCTA GCAGTTAAACATGACCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MHYAMLFLEQGTNEFHCQRQFSGMGIAFFKKYLGSSMTWNVGNPPSKGTLSTCLIHQVSKGSFLSELPFLWLKSPSEHLG CVKFTSNYEWQLLLGNLNHHRLPFPYPKGVQDLYPSFVIIYLNQGILTFRNVREAIHSHSLFRTDFRQLR
Sequences:
>Translated_150_residues MHYAMLFLEQGTNEFHCQRQFSGMGIAFFKKYLGSSMTWNVGNPPSKGTLSTCLIHQVSKGSFLSELPFLWLKSPSEHLG CVKFTSNYEWQLLLGNLNHHRLPFPYPKGVQDLYPSFVIIYLNQGILTFRNVREAIHSHSLFRTDFRQLR >Mature_150_residues MHYAMLFLEQGTNEFHCQRQFSGMGIAFFKKYLGSSMTWNVGNPPSKGTLSTCLIHQVSKGSFLSELPFLWLKSPSEHLG CVKFTSNYEWQLLLGNLNHHRLPFPYPKGVQDLYPSFVIIYLNQGILTFRNVREAIHSHSLFRTDFRQLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17415; Mature: 17415
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYAMLFLEQGTNEFHCQRQFSGMGIAFFKKYLGSSMTWNVGNPPSKGTLSTCLIHQVSK CCEEEEEEECCCCCEEHHHHHCCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCC GSFLSELPFLWLKSPSEHLGCVKFTSNYEWQLLLGNLNHHRLPFPYPKGVQDLYPSFVII CCHHHHCCEEEECCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCEEEE YLNQGILTFRNVREAIHSHSLFRTDFRQLR EECCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHYAMLFLEQGTNEFHCQRQFSGMGIAFFKKYLGSSMTWNVGNPPSKGTLSTCLIHQVSK CCEEEEEEECCCCCEEHHHHHCCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCC GSFLSELPFLWLKSPSEHLGCVKFTSNYEWQLLLGNLNHHRLPFPYPKGVQDLYPSFVII CCHHHHCCEEEECCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCEEEE YLNQGILTFRNVREAIHSHSLFRTDFRQLR EECCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA