Definition | Frankia sp. EAN1pec chromosome, complete genome. |
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Accession | NC_009921 |
Length | 8,982,042 |
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The map label for this gene is 158313676
Identifier: 158313676
GI number: 158313676
Start: 2210484
End: 2210813
Strand: Direct
Name: 158313676
Synonym: Franean1_1840
Alternate gene names: NA
Gene position: 2210484-2210813 (Clockwise)
Preceding gene: 158313675
Following gene: 158313677
Centisome position: 24.61
GC content: 70.0
Gene sequence:
>330_bases TTGACCATGGATTGGCTGAACGTGCCCGACGTGGCCGAGAGTCTGGGAGTGCCCGTCACCCGGGTGCGCCAGATGGTGCG CGACCGCACCCTTCTGGCACGGCGGGTGGACGGCGTGCTCAAGGTGCCTGCGGCGTTCATCCAGGACGGCGCGGTGGTCA AGGGCCTGCCCGGGTTGCTCACGCTGCTCTTCGACGCCGGCTACAACGACGACGAGGCCCTCGACTGGCTGTTCCGGGAG GATCCGAGCCTGCCAGGCACCCCGGTCCAGGCGCTGGCCGAGAACCGCGGCAAAGAGGTCAGGCGGCGCGCGCAGGCGCT GGGGTTCTGA
Upstream 100 bases:
>100_bases CGCCGGCTGGTCGCGGTGCTCGAGGCGGCCCGCAGGTCGGCGGCGGCCGGCGGCGCGCAGATGGCGCCCGGCTGACCAGC CCGGCGCAGGGTGTTTACTG
Downstream 100 bases:
>100_bases ACCGGGCCGGCCCGCCGAACCCTCCCGGCCAGGGGCGCCCGCTCCCGTAGGGTCGGGTGCATGGCCGATCGTCCGAACCG GGCGGAGCTCGATCCGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Type IIA poisomerase A Subunit; Transcription Regulator
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MTMDWLNVPDVAESLGVPVTRVRQMVRDRTLLARRVDGVLKVPAAFIQDGAVVKGLPGLLTLLFDAGYNDDEALDWLFRE DPSLPGTPVQALAENRGKEVRRRAQALGF
Sequences:
>Translated_109_residues MTMDWLNVPDVAESLGVPVTRVRQMVRDRTLLARRVDGVLKVPAAFIQDGAVVKGLPGLLTLLFDAGYNDDEALDWLFRE DPSLPGTPVQALAENRGKEVRRRAQALGF >Mature_108_residues TMDWLNVPDVAESLGVPVTRVRQMVRDRTLLARRVDGVLKVPAAFIQDGAVVKGLPGLLTLLFDAGYNDDEALDWLFRED PSLPGTPVQALAENRGKEVRRRAQALGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12044; Mature: 11913
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMDWLNVPDVAESLGVPVTRVRQMVRDRTLLARRVDGVLKVPAAFIQDGAVVKGLPGLL CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TLLFDAGYNDDEALDWLFREDPSLPGTPVQALAENRGKEVRRRAQALGF HHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure TMDWLNVPDVAESLGVPVTRVRQMVRDRTLLARRVDGVLKVPAAFIQDGAVVKGLPGLL CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TLLFDAGYNDDEALDWLFREDPSLPGTPVQALAENRGKEVRRRAQALGF HHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA